R/reexports.R

In scater: Single-Cell Analysis Toolkit for Gene Expression Data in R

#' @export
scuttle::addPerCellQC

#' @export
scuttle::addPerFeatureQC

#' @export
scuttle::aggregateAcrossCells

#' @export
scuttle::aggregateAcrossFeatures

#' @export
scuttle::calculateAverage

#' @export
scuttle::calculateCPM

#' @export
scuttle::calculateFPKM

#' @export
scuttle::calculateTPM

#' @export
scuttle::computeLibraryFactors

#' @export
scuttle::computeMedianFactors

#' @export
scuttle::isOutlier

#' @export
scuttle::librarySizeFactors

#' @export
scuttle::logNormCounts

#' @export
scuttle::makePerCellDF

#' @export
scuttle::makePerFeatureDF

#' @export
scuttle::medianSizeFactors

#' @export
scuttle::mockSCE

#' @export
scuttle::normalizeCounts

#' @export
scuttle::numDetectedAcrossCells

#' @export
scuttle::numDetectedAcrossFeatures

#' @export
scuttle::perCellQCMetrics

#' @export
scuttle::perFeatureQCMetrics

#' @export
scuttle::quickPerCellQC

#' @export
scuttle::readSparseCounts

#' @export
scuttle::sumCountsAcrossCells

#' @export
scuttle::sumCountsAcrossFeatures

#' @export
scuttle::uniquifyFeatureNames