scater: Single-Cell Analysis Toolkit for Gene Expression Data in R

A collection of tools for doing various analyses of single-cell RNA-seq gene expression data, with a focus on quality control and visualization.

Package details

AuthorDavis McCarthy [aut, cre], Kieran Campbell [aut], Aaron Lun [aut, ctb], Quin Wills [aut], Vladimir Kiselev [ctb]
Bioconductor views Coverage DataImport DataRepresentation DimensionReduction GeneExpression ImmunoOncology Infrastructure Normalization Preprocessing QualityControl RNASeq Sequencing SingleCell Software Transcriptomics Visualization
MaintainerDavis McCarthy <>
Package repositoryView on Bioconductor
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scater documentation built on June 28, 2020, 2 a.m.