cxds_getTopPairs: Extract top-scoring gene pairs from an SingleCellExperiment...

Description Usage Arguments Value

View source: R/cxds.R

Description

Extract top-scoring gene pairs from an SingleCellExperiment where cxds has been run

Usage

1
cxds_getTopPairs(sce, n = 100)

Arguments

sce

single cell experiment to analyze; needs "counts" in assays slot.

n

integer. The number of gene pairs to extract. Default: 100

Value

matrix Matrix with two colulmns, each containing gene indexes for gene pairs (rows).


scds documentation built on Nov. 8, 2020, 7:01 p.m.