scds: In-Silico Annotation of Doublets for Single Cell RNA Sequencing Data

In single cell RNA sequencing (scRNA-seq) data combinations of cells are sometimes considered a single cell (doublets). The scds package provides methods to annotate doublets in scRNA-seq data computationally.

Package details

AuthorDennis Kostka [aut, cre], Bais Abha [aut]
Bioconductor views Classification GeneExpression Preprocessing QualityControl RNASeq Sequencing SingleCell Software Transcriptomics
MaintainerDennis Kostka <>
LicenseMIT + file LICENSE
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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scds documentation built on Nov. 8, 2020, 7:01 p.m.