quantileGRangesWidth: Quantile width determination strategy
In seqsetvis: Set Based Visualizations for Next-Gen Sequencing Data

Returns the lowest multiple of win_size greater than min_quantile quantile of width(qgr)

1	quantileGRangesWidth(qgr, min_quantile = 0.75, win_size = 1)

`qgr`	GRanges to calculate quantile width for
`min_quantile`	numeric [0,1] the minimum quantile of width in qgr
`win_size`	numeric/integer >=1, returned value will be a multiple of this

numeric that is >= min_quantile and evenly divisible by win_size

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gr = CTCF_in_10a_overlaps_gr
quantileGRangesWidth(gr)
quantileGRangesWidth(gr, min_quantile = .5, win_size = 100)

seqsetvis documentation built on Nov. 8, 2020, 5:57 p.m.

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