Files in sevenbridges
Seven Bridges Platform API Client and Common Workflow Language Tool Builder in R
NEWS
NEWS.md
README.md
NAMESPACE
DESCRIPTION
LICENSE
R/class-task.R
R/misc-handler.R
R/class-marker.R
R/class-user.R
R/class-teammember.R
R/class-meta.R
R/class-item.R
R/misc-uploader.R
R/class-auth-utils.R
R/api-misc.R
R/class-member.R
R/class-team.R
R/class-division.R
R/class-tool.R
R/class-project.R
R/api-utils.R
R/class-app.R
R/class-files.R
R/class-all.R
R/class-cwl.R
R/class-flow.R
R/zzz.R
R/class-billing.R
R/api-http.R
R/misc-lift.R
R/class-ratelimit.R
R/class-auth.R
R/sevenbridges-package.R
R/class-filesystem.R
R/class-upload.R
R/class-volume.R
inst/doc/rstudio.Rmd
inst/doc/bioc-workflow.R
inst/doc/bioc-workflow.html
inst/doc/rstudio.R
inst/doc/docker.Rmd
inst/doc/apps.Rmd
inst/doc/docker.R
inst/doc/apps.html
inst/doc/api.Rmd
inst/doc/cgc-datasets.html
inst/doc/api.R
inst/doc/cgc-datasets.R
inst/doc/docker.html
inst/doc/apps.R
inst/doc/bioc-workflow.Rmd
inst/doc/api.html
inst/doc/cgc-datasets.Rmd
inst/doc/rstudio.html
inst/liftr/runif.Rmd
inst/extdata/bam_index.json
inst/extdata/download.txt
inst/extdata/runif.json
inst/extdata/test-easy-api.R
inst/extdata/sample1.fastq.meta
inst/extdata/sample1.fastq
inst/extdata/app/tool_star.json
inst/extdata/app/tool_unpack_fastq.json
inst/extdata/app/flow_star.json
inst/extdata/app/dna2protein/dna2protein.cwl.json
inst/extdata/app/dna2protein/README.md
inst/extdata/app/dna2protein/translate.cwl.json
inst/extdata/app/dna2protein/transcribe.cwl.json
inst/extdata/app/dna2protein/inputs.json
inst/extdata/app/dna2protein/data/input.txt
inst/docker/testenv/Dockerfile
inst/docker/rnaseqGene/Dockerfile
inst/docker/rnaseqGene/rabix/generator.R
inst/docker/rnaseqGene/rabix/rnaseqGene.json
inst/docker/rnaseqGene/src/performDE.R
inst/docker/rnaseqGene/report/rnaseqGene.Rmd
inst/docker/reporttool/Dockerfile
inst/docker/reporttool/rabix/reporttool.json
inst/docker/reporttool/rabix/generator.R
inst/docker/reporttool/src/report.R
inst/docker/sevenbridges/Dockerfile
inst/docker/sevenbridges/rabix/runif2.json
inst/docker/sevenbridges/rabix/runif.json
inst/docker/sevenbridges/rabix/generator.R
inst/docker/sevenbridges/src/supervisord.conf
inst/docker/sevenbridges/src/shiny-server.sh
inst/docker/sevenbridges/src/runif.R
inst/docker/sevenbridges/src/runif_args.R
inst/docker/sevenbridges/src/runif2spin.R
inst/docker/sevenbridges/src/shiny-server.conf
inst/docker/sevenbridges/report/report.Rmd
build/vignette.rds
tests/testthat.R
tests/testthat/test-test_tools.R
tests/testthat/test-easy-Auth.R
vignettes/rstudio.Rmd
vignettes/sevenbridges.css
vignettes/docker.Rmd
vignettes/apps.Rmd
vignettes/api.Rmd
vignettes/bioc-workflow.Rmd
vignettes/cgc-datasets.Rmd
vignettes/fig/bwa-mem.png
vignettes/fig/diagram_rnaseq.png
man/test_tool_bunny.Rd
man/Expression-class.Rd
man/CommandOutputBinding-class.Rd
man/batch.Rd
man/upload_info_part.Rd
man/cli_upload.Rd
man/WorkflowStep.Rd
man/CommandInputParameter-class.Rd
man/response-methods.Rd
man/status_check.Rd
man/upload_complete_all.Rd
man/File-class.Rd
man/Enum.Rd
man/Auth-class.Rd
man/App-class.Rd
man/CommandInputSchema-class.Rd
man/Files-class.Rd
man/project_details.Rd
man/sevenbridges-package.Rd
man/project_members.Rd
man/Tool-class.Rd
man/CCBList.Rd
man/get_uploader.Rd
man/CommandOutputParameter-class.Rd
man/cwl-utils.Rd
man/DSCList.Rd
man/CommandOutputSchema-class.Rd
man/upload_init.Rd
man/FS-class.Rd
man/cli_list_tags.Rd
man/test_tool_rabix.Rd
man/upload_complete_part.Rd
man/Workflow.Rd
man/Flow.Rd
man/ProcessRequirement.Rd
man/test_tool_cwlrun.Rd
man/api.Rd
man/setListClass.Rd
man/ExpressionTool-class.Rd
man/tag-methods.Rd
man/Parameter.Rd
man/download-methods.Rd
man/link.Rd
man/Schema.Rd
man/shorthand-cwl.Rd
man/set_test_env.Rd
man/upload_info.Rd
man/delete-methods.Rd
man/Handler-class.Rd
man/Process.Rd
man/as-methods.Rd
man/addIdNum.Rd
man/link_what.Rd
man/input_output_matrix.Rd
man/sbg_set_env.Rd
man/upload_delete.Rd
man/TaskHook.Rd
man/CWL.Rd
man/Item-class.Rd
man/CommandLineBinding-class.Rd
man/Binding.Rd
man/Metadata.Rd
man/convert_app.Rd
man/get_token.Rd
man/cli_list_projects.Rd
man/CommandLineTool.Rd
man/sbg_get_env.Rd
man/requirements.Rd
