API for signeR
Empirical Bayesian approach to mutational signature discovery

Global functions
Average_exp Man page
Average_exp,SignExp-method Man page
Average_sign Man page
Average_sign,SignExp-method Man page
BICboxplot Man page Source code
Classify Man page
Classify,SignExp,character-method Man page
Comp_labels Source code
DiffExp Man page
DiffExp,SignExp,character-method Man page
EstimateParameters Source code
ExposureBarplot Man page
ExposureBarplot,SignExp-method Man page
ExposureBoxplot Man page
ExposureBoxplot,SignExp-method Man page
ExposureHeat Man page
ExposureHeat,SignExp-method Man page
GibbsSamplerCpp Source code
Median_exp Man page
Median_exp,SignExp-method Man page
Median_sign Man page
Median_sign,SignExp-method Man page
Normalize Man page
Normalize,SignExp-method Man page
Optimal_sigs Source code
Paths Man page
Paths,SignExp-method Man page
Reorder_mutations Man page
Reorder_mutations,SignExp,numeric-method Man page
Reorder_samples Man page
Reorder_samples,SignExp,numeric-method Man page
Reorder_signatures Man page
Reorder_signatures,SignExp,numeric-method Man page
SignExp Man page
SignExp-class Man page
SignExpConstructor Source code
SignHeat Man page
SignHeat,SignExp-method Man page
SignPlot Man page
SignPlot,SignExp-method Man page
eBayesNMF Source code
genCountMatrixFromVcf Man page Source code
genOpportunityFromGenome Man page Source code
getFirstGenoAltIndex Source code
isBadGeno Source code
isGenoIndexRef Source code
read.snv.context Source code
revcomp Source code
setMutations Man page
setMutations,SignExp-method Man page
setSamples Man page
setSamples,SignExp-method Man page
signeR Man page Source code
signeR-package Man page
signeR documentation built on Nov. 1, 2018, 3:56 a.m.