slalom is a scalable modelling framework for single-cell RNA-seq data that uses gene set annotations to dissect single-cell transcriptome heterogeneity, thereby allowing to identify biological drivers of cell-to-cell variability and model confounding factors.
|Author||Florian Buettner [aut], Naruemon Pratanwanich [aut], Davis McCarthy [aut, cre], John Marioni [aut], Oliver Stegle [aut]|
|Bioconductor views||DimensionReduction GeneExpression ImmunoOncology Normalization RNASeq Reactome Sequencing SingleCell Software Transcriptomics Visualization|
|Maintainer||Davis McCarthy <email@example.com>|
|Package repository||View on Bioconductor|
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