SlalomModel: SlalomModel C++ class

In slalom: Factorial Latent Variable Modeling of Single-Cell RNA-Seq Data

Description

A C++ class for SlalomModel models.

Arguments

Y_init	matrix of expression values
pi_init	G x K matrix with each entry being the prior probability for a gene g being active for factor k.
X_init	matrix of initial factor states (N x K)
W_init	G x K matrix of initial weights
prior_alpha	numeric vector of length two giving prior values for the gamma hyperparameters of the precisions
prior_epsilon	numeric vector of length two giving prior values for the gamma hyperparameters of the residual variances

Value

an object of the SlalomModel class

slalom documentation built on Nov. 8, 2020, 5:24 p.m.