snifter: R wrapper for the python openTSNE library

Provides an R wrapper for the implementation of FI-tSNE from the python package openTNSE. See Poličar et al. (2019) <doi:10.1101/731877> and the algorithm described by Linderman et al. (2018) <doi:10.1038/s41592-018-0308-4>.

Package details

AuthorAlan O'Callaghan [aut, cre], Aaron Lun [aut]
Bioconductor views DimensionReduction Sequencing SingleCell Software Visualization
MaintainerAlan O'Callaghan <>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))


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snifter documentation built on Nov. 8, 2020, 7:34 p.m.