spotSegmentation: Microarray Spot Segmentation and Gridding for Blocks of Microarray Spots

Share:

Spot segmentation via model-based clustering and gridding for blocks within microarray slides, as described in Li et al, Robust Model-Based Segmentation of Microarray Images, Technical Report no. 473, Department of Statistics, University of Washington.

Author
Qunhua Li, Chris Fraley, Adrian Raftery Department of Statistics, University of Washington
Date of publication
None
Maintainer
Chris Fraley <fraley@stat.washington.edu>
License
GPL (>= 2)
Version
1.48.0
URLs

View on Bioconductor

Man pages

plotBlockImage
Plot Microarray Image Block
plot.spotseg
Microarray Spot Segmentation Plot
spotgrid
Gridding for Blocks of Microarray Spots
spotseg
Microarray Spot Segmentation
spotSegTest
Spot Segmentation Test Data
summary.spotseg
Microarray Spot Segmentation Summary

Files in this package

spotSegmentation/DESCRIPTION
spotSegmentation/NAMESPACE
spotSegmentation/R
spotSegmentation/R/plot.spotseg.R
spotSegmentation/R/plotBlockImage.R
spotSegmentation/R/spotgrid.R
spotSegmentation/R/spotseg.R
spotSegmentation/R/summary.spotseg.R
spotSegmentation/data
spotSegmentation/data/spotSegTest.rda
spotSegmentation/inst
spotSegmentation/man
spotSegmentation/man/plot.spotseg.Rd
spotSegmentation/man/plotBlockImage.Rd
spotSegmentation/man/spotSegTest.Rd
spotSegmentation/man/spotgrid.Rd
spotSegmentation/man/spotseg.Rd
spotSegmentation/man/summary.spotseg.Rd
spotSegmentation/vignettes
spotSegmentation/vignettes/spotsegdoc.pdf