spotSegmentation: Microarray Spot Segmentation and Gridding for Blocks of Microarray Spots

Spot segmentation via model-based clustering and gridding for blocks within microarray slides, as described in Li et al, Robust Model-Based Segmentation of Microarray Images, Technical Report no. 473, Department of Statistics, University of Washington.

Getting started

Package details

AuthorQunhua Li, Chris Fraley, Adrian Raftery Department of Statistics, University of Washington
Bioconductor views Microarray Preprocessing QualityControl TwoChannel
MaintainerChris Fraley <fraley@stat.washington.edu>
LicenseGPL (>= 2)
Version1.61.0
URL http://www.stat.washington.edu/fraley
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:
if (!requireNamespace("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("spotSegmentation")

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spotSegmentation documentation built on April 28, 2020, 9:18 p.m.