API for ssviz
A small RNA-seq visualizer and analysis toolkit
| Global functions | |
|---|---|
| counts | Man page |
| ctrlbam | Man page |
| getCountMatrix | Man page |
| getCountMatrix,DataFrame-method | Man page |
| getCountMatrix-methods | Man page |
| logicalORmissing-class | Man page |
| ntfreq | Man page |
| ntfreq,DataFrame,numeric-method | Man page |
| ntfreq-methods | Man page |
| pctrlbam | Man page |
| pingpong | Man page |
| pingpong,DataFrame-method | Man page |
| pingpong-methods | Man page |
| plotDistro | Man page |
| plotDistro,list-method | Man page |
| plotDistro-methods | Man page |
| plotFreq | Man page |
| plotFreq,data.frame,logicalORmissing-method | Man page |
| plotFreq-methods | Man page |
| plotPP | Man page |
| plotPP,list-method | Man page |
| plotPP-methods | Man page |
| plotRegion | Man page |
| plotRegion,list,character-method | Man page |
| plotRegion-methods | Man page |
| ptreatbam | Man page |
| readBam | Man page |
| readBam,character-method | Man page |
| readBam-methods | Man page |
| ssviz | Man page |
| ssviz-package | Man page |
| treatbam | Man page |
