getCountMatrix-methods: getCountMatrix
In ssviz: A small RNA-seq visualizer and analysis toolkit
Description
returns the bam data.frame with an additional column counts. Only relevant if the fasta file used for mapping input was previously collapsed via fastx_toolkit to return a fasta read name in the format of readnumber-totalcounts
Methods
signature(object="DataFrame")Returns and object of class data.frame having the values from the original bam file with an additional 'count' column.
ssviz documentation built on Nov. 8, 2020, 5:53 p.m.
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Description
returns the bam data.frame with an additional column counts. Only relevant if the fasta file used for mapping input was previously collapsed via fastx_toolkit to return a fasta read name in the format of readnumber-totalcounts
Methods
signature(object="DataFrame")Returns and object of class data.frame having the values from the original bam file with an additional 'count' column.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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