getCountMatrix-methods: getCountMatrix

Description Methods

Description

returns the bam data.frame with an additional column counts. Only relevant if the fasta file used for mapping input was previously collapsed via fastx_toolkit to return a fasta read name in the format of readnumber-totalcounts

Methods

signature(object="DataFrame")

Returns and object of class data.frame having the values from the original bam file with an additional 'count' column.



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