ssviz: A small RNA-seq visualizer and analysis toolkit

Small RNA sequencing viewer

AuthorDiana Low
Date of publicationNone
MaintainerDiana Low <lowdiana@gmail.com>
LicenseGPL-2
Version1.8.0

View on Bioconductor

Files in this package

ssviz/DESCRIPTION
ssviz/NAMESPACE
ssviz/NEWS
ssviz/R
ssviz/R/AllClasses.R ssviz/R/AllGenerics.R ssviz/R/helper.R
ssviz/build
ssviz/build/vignette.rds
ssviz/data
ssviz/data/ssviz.rda
ssviz/inst
ssviz/inst/doc
ssviz/inst/doc/ssviz.R
ssviz/inst/doc/ssviz.Rnw
ssviz/inst/doc/ssviz.pdf
ssviz/inst/extdata
ssviz/inst/extdata/ctrl.bam
ssviz/inst/extdata/treat.bam
ssviz/man
ssviz/man/counts.Rd ssviz/man/ctrlbam.Rd ssviz/man/getCountMatrix-methods.Rd ssviz/man/getCountMatrix.Rd ssviz/man/logicalORmissing-class.Rd ssviz/man/ntfreq-methods.Rd ssviz/man/ntfreq.Rd ssviz/man/pctrlbam.Rd ssviz/man/pingpong-methods.Rd ssviz/man/pingpong.Rd ssviz/man/plotDistro-methods.Rd ssviz/man/plotDistro.Rd ssviz/man/plotFreq-methods.Rd ssviz/man/plotFreq.Rd ssviz/man/plotPP-methods.Rd ssviz/man/plotPP.Rd ssviz/man/plotRegion-methods.Rd ssviz/man/plotRegion.Rd ssviz/man/ptreatbam.Rd ssviz/man/readBam-methods.Rd ssviz/man/readBam.Rd ssviz/man/ssviz-package.Rd ssviz/man/treatbam.Rd
ssviz/vignettes
ssviz/vignettes/pingpong.png
ssviz/vignettes/plotdistro1.png
ssviz/vignettes/plotdistro2.png
ssviz/vignettes/plotfreq.png
ssviz/vignettes/plotregion.png
ssviz/vignettes/ssviz.Rnw
ssviz/vignettes/workflow.png

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

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