timeOmics.simdata: Time-Course Simulated data

In timeOmics: Time-Course Multi-Omics data integration

Description

A list of dataset containing simulated data to be used in the vignette, generated as follow. Twenty reference time profiles were generated on nine equally spaced time points and assigned to four clusters (five profiles each). These ground truth profiles were then used to simulate new profiles (5 each). Finally, we modelled expression of new sampled profiles as a function of time.

Usage

timeOmics.simdata

Format

a list of data.frame

rawdata

data.frame, reference profiles

sim

data.frame, sampled profiles from reference data

modelled

data.frame, modelled data

lmms.output

full lmms object output

time

numerci vector, time for each sample of rawdata

Y

another modelled data.frame for multiblock integration

Z

another modelled data.frame for multiblock integration

timeOmics documentation built on Nov. 8, 2020, 10:58 p.m.