zh.data: A raw read count matrix of zebrafish injured heart.
In tomoda: Tomo-seq data analysis
Description
Usage
Format
Source
References
Description
A dataset containing gene expression across 40 sections of zebrafish heart generated with Tomo-seq.
The zebrafish heart is 3 days post cryoinjury (3 dpi).
Usage
1
Format
A numeric matrix with 16495 genes as rows and 40 section as columns. Its row names are gene names and column names are section names.
Source
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE74652
References
Wu CC, Kruse F, Vasudevarao MD, et al. Spatially Resolved Genome-wide Transcriptional Profiling Identifies BMP Signaling as Essential Regulator of Zebrafish Cardiomyocyte Regeneration. Dev Cell. 2016;36(1):36-49. doi:10.1016/j.devcel.2015.12.010
tomoda documentation built on Nov. 8, 2020, 8:10 p.m.
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Description Usage Format Source References
Description
A dataset containing gene expression across 40 sections of zebrafish heart generated with Tomo-seq. The zebrafish heart is 3 days post cryoinjury (3 dpi).
Usage
1 |
Format
A numeric matrix with 16495 genes as rows and 40 section as columns. Its row names are gene names and column names are section names.
Source
https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE74652
References
Wu CC, Kruse F, Vasudevarao MD, et al. Spatially Resolved Genome-wide Transcriptional Profiling Identifies BMP Signaling as Essential Regulator of Zebrafish Cardiomyocyte Regeneration. Dev Cell. 2016;36(1):36-49. doi:10.1016/j.devcel.2015.12.010
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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