velociraptor-package: velociraptor: Toolkit for Single-Cell Velocity
In velociraptor: Toolkit for Single-Cell Velocity
Description
Author(s)
See Also
Description
This package provides Bioconductor-friendly wrappers for RNA velocity calculations in single-cell RNA-seq data.
We use the basilisk package to manage Conda environments,
and the zellkonverter package to convert data structures between SingleCellExperiment (R) and AnnData (Python).
The information produced by the velocity methods is stored in the various components of the SingleCellExperiment class.
Author(s)
Maintainer: Kevin Rue-Albrecht kevinrue67@gmail.com (ORCID)
Authors:
Aaron Lun infinite.monkeys.with.keyboards@gmail.com (ORCID)
Charlotte Soneson charlottesoneson@gmail.com (ORCID)
See Also
Useful links:
-
Report bugs at https://github.com/kevinrue/velociraptor/issues
velociraptor documentation built on Nov. 8, 2020, 4:58 p.m.
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Description Author(s) See Also
Description
This package provides Bioconductor-friendly wrappers for RNA velocity calculations in single-cell RNA-seq data. We use the basilisk package to manage Conda environments, and the zellkonverter package to convert data structures between SingleCellExperiment (R) and AnnData (Python). The information produced by the velocity methods is stored in the various components of the SingleCellExperiment class.
Author(s)
Maintainer: Kevin Rue-Albrecht kevinrue67@gmail.com (ORCID)
Authors:
Aaron Lun infinite.monkeys.with.keyboards@gmail.com (ORCID)
Charlotte Soneson charlottesoneson@gmail.com (ORCID)
See Also
Useful links:
Report bugs at https://github.com/kevinrue/velociraptor/issues
R Package Documentation
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We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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