xmapbridge: Export plotting files to the xmapBridge for visualisation in X:Map

xmapBridge can plot graphs in the X:Map genome browser. This package exports plotting files in a suitable format.

Author
Tim Yates <Tim.Yates@cruk.manchester.ac.uk> and Crispin J Miller <Crispin.Miller@cruk.manchester.ac.uk>
Date of publication
None
Maintainer
Chris Wirth <Christopher.Wirth@cruk.manchester.ac.uk>
License
LGPL-3
Version
1.32.0
URLs

View on Bioconductor

Man pages

exon.data
Sample exon array dataset
xmapbridge-internal
Internal xmapbridge objects
xmapbridge-package
Export plotting files to the xmapBridge for visualisation in...
xmap.col
Generate a colour integer for the xmapBridge
xmap.files
Underlying xmap methods for manipulating projects, graphs,...
xmap.plot
Utility methods for quick graph generation

Files in this package

xmapbridge/DESCRIPTION
xmapbridge/NAMESPACE
xmapbridge/R
xmapbridge/R/xmapbridge.R
xmapbridge/R/zzz.R
xmapbridge/build
xmapbridge/build/vignette.rds
xmapbridge/data
xmapbridge/data/xmapbridge.rda
xmapbridge/inst
xmapbridge/inst/CITATION
xmapbridge/inst/doc
xmapbridge/inst/doc/xmapbridge.R
xmapbridge/inst/doc/xmapbridge.Rnw
xmapbridge/inst/doc/xmapbridge.pdf
xmapbridge/inst/unitTests
xmapbridge/inst/unitTests/Makefile
xmapbridge/inst/unitTests/runit.bridgeTests.R
xmapbridge/man
xmapbridge/man/exon.data.Rd
xmapbridge/man/xmap.col.Rd
xmapbridge/man/xmap.files.Rd
xmapbridge/man/xmap.plot.Rd
xmapbridge/man/xmapbridge-internal.Rd
xmapbridge/man/xmapbridge-package.Rd
xmapbridge/tests
xmapbridge/tests/doRUnit.R
xmapbridge/tests/xmapbridge_test.R
xmapbridge/vignettes
xmapbridge/vignettes/bridge.png
xmapbridge/vignettes/coloursandalpha.png
xmapbridge/vignettes/diffstyles.png
xmapbridge/vignettes/figure.png
xmapbridge/vignettes/figure1.png
xmapbridge/vignettes/figure3.png
xmapbridge/vignettes/multiple.png
xmapbridge/vignettes/xmapbridge.Rnw