xmapbridge: Export plotting files to the xmapBridge for visualisation in X:Map

xmapBridge can plot graphs in the X:Map genome browser. This package exports plotting files in a suitable format.

Install the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("xmapbridge")
AuthorTim Yates <Tim.Yates@cruk.manchester.ac.uk> and Crispin J Miller <Crispin.Miller@cruk.manchester.ac.uk>
Bioconductor views Annotation ReportWriting Visualization
Date of publicationNone
MaintainerChris Wirth <Christopher.Wirth@cruk.manchester.ac.uk>
LicenseLGPL-3
Version1.34.0
http://xmap.picr.man.ac.uk
http://www.bioconductor.org

View on Bioconductor

Functions

as.character,Graph-method Man page
as.character,Plot-method Man page
as.character,Project-method Man page
exon.data Man page
.get.xmap.cache.dir Man page
==,Graph,Graph-method Man page
!=,Graph,Graph-method Man page
.make.xmap.child.file Man page
.make.xmap.project.folder Man page
==,Plot,Plot-method Man page
!=,Plot,Plot-method Man page
==,Project,Project-method Man page
!=,Project,Project-method Man page
xmapbridge Man page
xmapbridge-package Man page
xmap.col Man page
xmap.debug Man page
.xmap.env Man page
xmap.graph.delete Man page
xmap.graph.list Man page
xmap.graph.load Man page
xmap.graph.new Man page
xmap.graph.save Man page
.xmap.graph.valid Man page
xmap.plot Man page
xmap.plot.delete Man page
xmap.plot.list Man page
xmap.plot.load Man page
xmap.plot.new Man page
xmap.plot.save Man page
xmap.points Man page
xmap.project.delete Man page
xmap.project.list Man page
xmap.project.load Man page
xmap.project.new Man page
xmap.project.save Man page
.xmap.project.valid Man page
.xmap.read.file.info Man page
.xmap.write.file.info Man page

Files

DESCRIPTION
NAMESPACE
R
R/xmapbridge.R R/zzz.R
build
build/vignette.rds
data
data/xmapbridge.rda
inst
inst/CITATION
inst/doc
inst/doc/xmapbridge.R
inst/doc/xmapbridge.Rnw
inst/doc/xmapbridge.pdf
inst/unitTests
inst/unitTests/Makefile
inst/unitTests/runit.bridgeTests.R
man
man/exon.data.Rd man/xmap.col.Rd man/xmap.files.Rd man/xmap.plot.Rd man/xmapbridge-internal.Rd man/xmapbridge-package.Rd
tests
tests/doRUnit.R tests/xmapbridge_test.R
vignettes
vignettes/bridge.png
vignettes/coloursandalpha.png
vignettes/diffstyles.png
vignettes/figure.png
vignettes/figure1.png
vignettes/figure3.png
vignettes/multiple.png
vignettes/xmapbridge.Rnw

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

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