API for ADAPTS
Automated Deconvolution Augmentation of Profiles for Tissue Specific Cells

Global functions
.onLoad Source code
AugmentSigMatrix Man page Source code
LM22 Man page
Licenses Man page
MGSM27 Man page
SVMDECON Man page Source code
buildSeed Man page Source code
buildSpilloverMat Man page Source code
calcAcc Man page Source code
clustWspillOver Man page Source code
collapseCellTypes Man page Source code
estCellCounts.nPass Man page Source code
estCellPercent Man page Source code
estCellPercent.DCQ Man page Source code
estCellPercent.DeconRNASeq Man page Source code
estCellPercent.nnls Man page Source code
estCellPercent.proportionsInAdmixture Man page Source code
estCellPercent.spillOver Man page Source code
estCellPercent.svmdecon Man page Source code
findConvergenceIter Man page Source code
gListFromRF Man page Source code
getF1mcc Man page Source code
getLM22cells Man page Source code
hierarchicalClassify Man page Source code
hierarchicalSplit Man page Source code
loadMGSM27 Man page Source code
loadModMap Man page Source code
loopTillConvergence Man page Source code
matrixToGenelist Man page Source code
meanResults Man page
missForest.par Man page Source code
plotKappas Man page Source code
rankByT Man page Source code
remakeLM22p Man page Source code
scSample Man page Source code
shrinkByKappa Man page Source code
shrinkSigMatrix Man page Source code
spillToConvergence Man page Source code
splitSCdata Man page Source code
testAllSigMatrices Man page Source code
weightNorm Man page Source code
ADAPTS documentation built on Sept. 14, 2022, 9:05 a.m.