AF: Model-Based Estimation of Confounder-Adjusted Attributable Fractions
Version 0.1.4

Estimates the attributable fraction in different sampling designs adjusted for measured confounders using logistic regression (cross-sectional and case-control designs), conditional logistic regression (matched case-control design), Cox proportional hazard regression (cohort design with time-to- event outcome) and gamma-frailty model with a Weibull baseline hazard. The variance of the estimator is obtained by combining the delta method with the the sandwich formula. Dahlqwist et al.(2016) .

Browse man pages Browse package API and functions Browse package files

AuthorElisabeth Dahlqwist and Arvid Sjölander
Date of publication2017-02-11 00:42:31
MaintainerElisabeth Dahlqwist <elisabeth.dahlqwist@ki.se>
LicenseGPL-2 | GPL-3
Version0.1.4
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("AF")

Man pages

AF.cc: Attributable fraction for mached and non-matched case-control...
AF.ch: Attributable fraction function for cohort sampling designs...
AFclogit: Attributable fraction estimation based on a conditional...
AFcoxph: Attributable fraction function based on a Cox Proportional...
AF.cs: Attributable fraction for cross-sectional sampling designs....
AFglm: Attributable fraction estimation based on a logistic...
AFparfrailty: Attributable fraction function based on a Weibull...
clslowbwt: Birthweight data clustered on the mother.
plot.AF: Plot function for objects of class "'AF'" from the function...
rott2: Cohort study on breast cancer patients from the Netherlands.
singapore: Case-control study on oesophageal cancer in Chinese Singapore...
summary.AF: Summary function for objects of class "'AF'".

Functions

AF.cc Man page Source code
AF.ch Man page Source code
AF.cs Man page Source code
AFclogit Man page Source code
AFcoxph Man page Source code
AFglm Man page Source code
AFparfrailty Man page Source code
CI.AF Source code
aggr Source code
clslowbwt Man page
is.binary Source code
plot.AF Man page Source code
print.AF Source code
print.summary.AF Source code
rott2 Man page
singapore Man page
summary.AF Man page Source code

Files

NAMESPACE
data
data/rott2.rda
data/singapore.rda
data/clslowbwt.rda
R
R/AFch.R
R/AFclogit.R
R/data-singapore.R
R/data-rott2.R
R/AFcs.R
R/AFfunctions.R
R/AFglm.R
R/data-clslowbwt.R
R/AFcc.R
R/AFcoxph.R
R/AFparfrailty.R
MD5
DESCRIPTION
man
man/AF.ch.Rd
man/AFcoxph.Rd
man/plot.AF.Rd
man/AF.cc.Rd
man/singapore.Rd
man/rott2.Rd
man/summary.AF.Rd
man/AFparfrailty.Rd
man/AF.cs.Rd
man/AFglm.Rd
man/AFclogit.Rd
man/clslowbwt.Rd
AF documentation built on May 19, 2017, 5:18 p.m.