perm.tests: Permutation testing

Description Usage Arguments Value Examples

View source: R/perm.tests.r

Description

Calculates permutation p-values for testing independence in 2x2 case-control tables.

Usage

1
perm.tests(m0, m1, r0, r1, lowthresh = 1e-12)

Arguments

m0

Number of control subjects

m1

Number of case subjects

r0

Number of control subjects exposed

r1

Number of case subjects exposed

lowthresh

A threshold for probabilities below to be considered as zero. Defaults to 1e-12.

Value

A vector of permutation p-values, computed under score, likelihood ratio, Wald, and Firth tests.

Examples

1
perm.tests(15000, 5000, 30, 25)

Example output

     score.p         lr.p       wald.p      wald0.p      firth.p 
0.0007888190 0.0014766080 0.0007644937 0.0007646248 0.0009174857 

AUtests documentation built on Sept. 4, 2020, 1:07 a.m.