AdmixPoly
Global and Local Admixture Inference in Polyploids

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AdmixPoly: Global and Local Admixture Inference in Polyploids
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Global and Local Admixture Inference in Polyploids

AdmixGlobalExpectation-Maximization algorithm for global (genome-wide)...
AdmixLocalForward-Backward algorithm for local admixture inference
AdmixPoly-packageAdmixPoly: Global and Local Admixture Inference in Polyploids
ComputeLogLikCalculate the log-likelihood
GlobalPlotPlot global admixture proportions
LocalPlotPlot local ancestry dosages
ReadHPARead Haplotype Presence-Absence (HPA) file
ReadVCFRead VCF file
SimulatePopSimulate an admixed polyploid population characterized for...
UpdateParamUpdate Prop and Freq parameters for EM step
AdmixPoly documentation built on June 18, 2026, 1:06 a.m.

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