Simulates the effect of management or demography on allele retention and inbreeding accumulation in bottlenecked populations of animals with overlapping generations.
Typically, the user will run aRetain, then aRetain.summary to assess characteristics of the simulated population.  indiv.summary, pedigree.summary (requires package pedigree),  LRS.summary, and  agerepro.summary will provide further output.
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