pedigree.summary: Pedigree Simulation and Summary
In AlleleRetain: Allele Retention, Inbreeding, and Demography
Description
Usage
Arguments
Value
Author(s)
References
Description
Summarizes inbreeding accumulation in the population simulated by
aRetain. Must be run after aRetain is run with
trackall = TRUE.
Requires package pedigree.
Usage
1
pedigree.summary(adata)
Arguments
adata
list of output from aRetain
Value
A matrix in which the rows correspond to simulation years (0,...,nyears) and
the columns are summary variables:
year
year of simulation
meanF
mean F, averaged across individuals and then across replicates
varF
inter-replicate variance in F
indivVarF
inter-individual variance of F, averaged across replicates
Author(s)
Emily L. Weiser emily.l.weiser@gmail.com
References
Weiser, E.L., Grueber, C. E., and I. G. Jamieson. 2012. AlleleRetain: A program
to assess management options for conserving allelic diversity in small, isolated
populations. Molecular Ecology Resources 12:1161-1167.
AlleleRetain documentation built on May 2, 2019, 12:34 a.m.
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Description Usage Arguments Value Author(s) References
Description
Summarizes inbreeding accumulation in the population simulated by
aRetain. Must be run after aRetain is run with
trackall = TRUE.
Requires package pedigree.
Usage
1 | pedigree.summary(adata)
|
Arguments
adata |
list of output from |
Value
A matrix in which the rows correspond to simulation years (0,...,nyears) and the columns are summary variables:
year |
year of simulation |
meanF |
mean F, averaged across individuals and then across replicates |
varF |
inter-replicate variance in F |
indivVarF |
inter-individual variance of F, averaged across replicates |
Author(s)
Emily L. Weiser emily.l.weiser@gmail.com
References
Weiser, E.L., Grueber, C. E., and I. G. Jamieson. 2012. AlleleRetain: A program to assess management options for conserving allelic diversity in small, isolated populations. Molecular Ecology Resources 12:1161-1167.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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