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AmpGram: Prediction of Antimicrobial Peptides
Predicts antimicrobial peptides using random forests trained on the n-gram encoded peptides. The implemented algorithm can be accessed from both the command line and shiny-based GUI. The AmpGram model is too large for CRAN and it has to be downloaded separately from the repository: <https://github.com/michbur/AmpGramModel>.
Getting started
Browse package contents
Package details |
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| Author | Michal Burdukiewicz [cre, aut] (<https://orcid.org/0000-0001-8926-582X>), Katarzyna Sidorczuk [ctb], Filip Pietluch [ctb], Dominik Rafacz [aut], Stefan Roediger [ctb] (<https://orcid.org/0000-0002-1441-6512>), Jaroslaw Chilimoniuk [ctb] (<https://orcid.org/0000-0001-5467-018X>) |
| Maintainer | Michal Burdukiewicz <michalburdukiewicz@gmail.com> |
| License | GPL-3 |
| Version | 1.0 |
| URL | https://github.com/michbur/AmpGram |
| Package repository | View on CRAN |
| Installation |
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