database_fungi_creation: database_fungi_creation

In Anaconda: Targeted Differential and Global Enrichment Analysis of Taxonomic Rank by Shared Asvs

database_fungi_creation

Description

Create a Database for Fungi kingdom for Global analysis by Taxon_MWU analysis from targeted analysis only from rarefied ASVs. Please, run setwd("02_Global_analysis") after this function.

Usage

database_fungi_creation(nothing)

Arguments

nothing

It's important not to write anything between the brackets, the database will create itself.

Value

A data frame file named database_fungi_package_all.tab created from the taxonomy_all_bacteria_QIIME2_and_NCBI_format.txt file and your own taxonomy.tsv file.

Examples

# It is important not to write anything between the brackets, the database will create itself.
## Not run: database_fungi_creation()
# Please, run setwd("02_Global_analysis") after this function.

Anaconda documentation built on Oct. 14, 2022, 9:06 a.m.