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AnanseSeurat: Construct ANANSE GRN-Analysis Seurat
Enables gene regulatory network (GRN) analysis on single cell clusters, using the GRN analysis software 'ANANSE', Xu et al.(2021) <doi:10.1093/nar/gkab598>. Export data from 'Seurat' objects, for GRN analysis by 'ANANSE' implemented in 'snakemake'. Finally, incorporate results for visualization and interpretation.
Getting started
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Package details |
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| Author | Jos Smits [aut, cre, cph] (<https://orcid.org/0000-0001-5858-3905>), Huiqing Jo Zhou [aut, fnd, cph] (<https://orcid.org/0000-0002-2434-3986>) |
| Maintainer | Jos Smits <Jsmits@science.ru.nl> |
| License | Apache License (>= 2) |
| Version | 1.2.0 |
| URL | https://github.com/JGASmits/AnanseSeurat/ |
| Package repository | View on CRAN |
| Installation |
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