| accuracy | Scaled mean squared error of accumulation curves. |
| aic | Akaike Information Criterion. |
| alpha | Auxiliary function, used only internally Alpha diversity... |
| alpha.accum | Alpha diversity accumulation curves (observed and estimated). |
| alpha.estimate | Alpha diversity estimates. |
| arrabida | Sample data of spiders in Arrabida (Portugal) |
| beta | Beta diversity (Taxon, Phylogenetic or Functional Diversity -... |
| beta.accum | Beta diversity accumulation curves. |
| beta.evenness | Beta diversity evenness (Taxon, Phylogenetic or Functional... |
| beta.multi | Beta diversity among multiple communities. |
| contribution | Contribution of species or individuals to total... |
| coverage | Coverage of datasets. |
| cwd | Community Weighted Dispersion. |
| cwe | Community Weighted Evenness. |
| cwm | Community Weighted Mean. |
| dispersion | Phylogenetic/functional dispersion of species or individuals. |
| dummy | Dummify variables. |
| evenness | Taxonomic/phylogenetic/functional evenness of species or... |
| evenness.contribution | Contribution of each species or individual to the total... |
| fill | Filling missing data. |
| functree | Functional tree for 338 species of spiders |
| gamma | Gamma diversity (Taxon, Phylogenetic or Functional Diversity... |
| gdm | General dynamic model of oceanic island biogeography (GDM). |
| geres | Sample data of spiders in Geres (Portugal) |
| gower | Gower distance. |
| guadiana | Sample data of spiders in Guadiana (Portugal) |
| hill | Hill numbers. |
| hull.alpha | Alpha diversity using convex hull hypervolumes. |
| hull.beta | Beta diversity partitioning using convex hull hypervolumes. |
| hull.build | Build convex hull hypervolumes. |
| hull.contribution | Contribution of each observation to a convex hull... |
| hull.gamma | Gamma diversity using convex hull hypervolumes. |
| hull.sad | Species-abundance distribution (SAD) using convex hulls. |
| hyper.arrangement | Functional arrangement within a functional space (generic... |
| hyper.build | Build hyperspace. |
| hyper.quality | Quality of hyperspace. |
| iaor | Interspecific abundance-occupancy relationship (IAOR). |
| kernel.alpha | Alpha diversity using kernel density hypervolumes. |
| kernel.arrangement | Functional arrangement of kernel density hypervolumes. |
| kernel.bandwidth | Kernel bandwidth estimation by median heuristic method with... |
| kernel.beta | Beta diversity partitioning using kernel density... |
| kernel.beta.evenness | Functional beta diversity evenness using kernel density... |
| kernel.build | Build kernel hypervolumes. |
| kernel.contribution | Contribution of each observation to the kernel density... |
| kernel.dispersion | Functional dispersion of kernel density hypervolumes. |
| kernel.evenness | Functional evenness of kernel density hypervolumes. |
| kernel.evenness.contribution | Contribution of each observation to the evenness of a kernel... |
| kernel.gamma | Gamma diversity using kernel density hypervolumes. |
| kernel.hotspots | Hotspots in hypervolumes. |
| kernel.originality | Functional originality of observations in kernel density... |
| kernel.sad | Species-abundance distribution (SAD) using kernel density... |
| kernel.similarity | Pairwise similarity among kernel density hypervolumes. |
| linnean | Create Linnean tree. |
| mixture | Mixture model. |
| optim.alpha | Optimization of alpha diversity sampling protocols. |
| optim.alpha.stats | Efficiency statistics for alpha-sampling. |
| optim.beta | Optimization of beta diversity sampling protocols. |
| optim.beta.stats | Efficiency statistics for beta-sampling. |
| optim.spatial | Optimization of spatial sampling. |
| originality | Phylogenetic/functional originality of species or... |
| phylotree | Taxonomic tree for 338 species of spiders (surrogate for... |
| r2 | Model R2. |
| rao | Rao quadratic entropy. |
| raster.alpha | Maps of alpha diversity (Taxon, Phylogenetic or Functional... |
| raster.beta | Maps of beta diversity (Taxon, Phylogenetic or Functional... |
| raster.dispersion | Maps of phylogenetic/functional dispersion of species or... |
| raster.evenness | Maps of phylogenetic/functional evenness of species or... |
| sad | Species-abundance distribution (SAD). |
| sar | Species-area relationship (SAR). |
| ses | Standard Effect Size. |
| sim.plot | Plots of simulated species spatial distributions. |
| sim.sad | Simulation of species abundance distributions (SAD). |
| sim.sample | Simulation of sampling from artificial communities. |
| sim.spatial | Simulation of species spatial distributions. |
| sim.tree | Simulation of phylogenetic or functional tree. |
| slope | Slope of accumulation curves. |
| standard | Standardize variables. |
| tree.addTip | Add tips to a tree. |
| tree.build | Build functional tree. |
| tree.quality | Quality of tree. |
| tree.zero | Convert negative branches of tree. |
| uniqueness | Phylogenetic/functional uniqueness of species. |
