eib.plot: Expected Incremental Benefit (EIB) Plot

View source: R/eib.plot.R

eib.plot.bceaR Documentation

Expected Incremental Benefit (EIB) Plot

Description

Produces a plot of the Expected Incremental Benefit (EIB) as a function of the willingness to pay.

Usage

## S3 method for class 'bcea'
eib.plot(
  he,
  comparison = NULL,
  pos = c(1, 0),
  size = NULL,
  plot.cri = NULL,
  graph = c("base", "ggplot2", "plotly"),
  ...
)

eib.plot(he, ...)

Arguments

he

A bcea object containing the results of the Bayesian modelling and the economic evaluation.

comparison

Selects the comparator, in case of more than two interventions being analysed. Default as NULL plots all the comparisons together. Any subset of the possible comparisons can be selected (e.g., comparison=c(1,3) or comparison=2).

pos

Parameter to set the position of the legend (only relevant for multiple interventions, ie more than 2 interventions being compared). Can be given in form of a string (bottom|top)(right|left) for base graphics and bottom|top|left|right for ggplot2. It can be a two-elements vector, which specifies the relative position on the x and y axis respectively, or alternatively it can be in form of a logical variable, with FALSE indicating to use the default position and TRUE to place it on the bottom of the plot.

size

Value (in millimetres) of the size of the willingness to pay label. Used only if graph="ggplot2", otherwise it will be ignored with a message. If set to NA, the break-even point line(s) and label(s) are suppressed, with both base graphics and ggplot2.

plot.cri

Logical value. Should the credible intervals be plotted along with the expected incremental benefit? Default as NULL draws the 95\ include them for multiple comparisons. Setting plot.cri=TRUE or plot.cri=FALSE forces the function to add the intervals or not. The level of the intervals can be also set, see ... for more details.

graph

A string used to select the graphical engine to use for plotting. Should (partial-)match the three options "base", "ggplot2" or "plotly". Default value is "base". Not all plotting functions have a "plotly" implementation yet.

...

If graph="ggplot2" and a named theme object is supplied, it will be added to the ggplot object. Additional arguments:

  • alpha can be used to set the CrI level when plot.cri=TRUE, with a default value of alpha=0.05.

  • cri.quantile controls the the method of calculation of the credible intervals. The default value cri.quantile=TRUE defines the CrI as the interval between the alpha/2-th and 1-alpha/2-th quantiles of the IB distribution. Setting cri.quantile=FALSE will use a normal approximation on the IB distribution to calculate the intervals.

  • line = list(color): specifies the line colour(s) - all graph types.

  • line = list(type): specifies the line type(s) as lty numeric values - all graph types.

  • area_include: include area under the EIB curve - plotly only.

  • area_color: specifies the AUC curve - plotly only.

Value

eib

If graph="ggplot2" a ggplot object, or if graph="plotly" a plotly object containing the requested plot. Nothing is returned when graph="base", the default.

The function produces a plot of the Expected Incremental Benefit as a function of the discrete grid approximation of the willingness to pay parameter. The break even point (i.e. the point in which the EIB = 0, i.e. when the optimal decision changes from one intervention to another) is also showed by default. The value ⁠k*⁠ is the discrete grid approximation of the ICER.

Author(s)

Gianluca Baio, Andrea Berardi

References

\insertRef

Baio2011BCEA

\insertRef

Baio2013BCEA

See Also

bcea(), ib.plot(), ceplane.plot()

Examples

data(Vaccine)
 
# Runs the health economic evaluation using BCEA
m <- bcea(
      e=eff,
      c=cost,               # defines the variables of 
                            #  effectiveness and cost
      ref=2,                # selects the 2nd row of (e, c) 
                            #  as containing the reference intervention
      interventions=treats, # defines the labels to be associated 
                            #  with each intervention
      Kmax=50000,           # maximum value possible for the willingness 
                            #  to pay threshold; implies that k is chosen 
                            #  in a grid from the interval (0, Kmax)
      plot=FALSE             # plots the results
)
eib.plot(m)
eib.plot(m, graph = "ggplot2") + ggplot2::theme_linedraw()

data(Smoking)
treats <- c("No intervention", "Self-help",
            "Individual counselling", "Group counselling")
m <- bcea(eff, cost, ref = 4, interventions = treats, Kmax = 500)
eib.plot(m)


BCEA documentation built on June 22, 2024, 11:08 a.m.