Description Usage Arguments Value See Also Examples
plot the observed response rate versus subgroup ID with clusters coded by the color of dots.
1 2 3 4 5 6 7 8 9 |
res |
BCHM calculation results. |
col |
Color vector |
pch |
pch vector |
xlim |
X-axis range |
ylim |
Y-axis range |
cex |
size of points |
... |
other options |
None
BCHM Perform the analysis based on the BCHM design.
BCHMplot_post_value Plot the posterior response of subgroups.
BCHMplot_post_dist Plot the posterior distributions of subgroups.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 | nDat = c(25, 25, 25, 25) # total number of patients
xDat = c(2, 3, 8, 6) # number of responses
alpha <- 1e-20
d0 <- 0.0
alpha1 = 50
beta1 = 10
tau2 <- 0.1
phi1 <- 0.1
deltaT <- 0.2
thetaT <- 0.60
res <- BCHM(nDat = nDat,
xDat = xDat,
alpha = alpha,
d0 = d0,
alpha1 = alpha1,
beta1 = beta1,
tau2 = tau2,
phi1 = phi1,
deltaT = deltaT,
thetaT = thetaT,
burnIn = 100,
MCIter = 200,
MCNum = 1000,
seed = 1000
)
print(res$SMatrix)
print(res$Result)
col <- res$Result[,4]
BCHMplot_cluster(res, col, pch=16)
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