BEANSP: Bayesian Estimate of Age-specific Nest Survival Probabilities

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Computing age specific nest survival rates based on a Bayesian hierarchical model. This package can handle unknown nest age, irregular visiting schedule and nest-specific covariates.

Author
Chong He, Yiqun Yang, Jing Cao
Date of publication
2014-09-19 06:22:07
Maintainer
Yiqun Yang <yyry2@mail.missouri.edu>
License
GPL-2
Version
1.0

View on CRAN

Man pages

BEANSP-package
BEANSP
example1
Missouri Dickcissel Nest Survival Data - Interval Format
example2
Missouri Dickcissel Nest Survival Data - Date Format
nestconv
Data Format Conversion
nestsr
Nest Survival Rate Esitmate
plot.asr
Plot average survival rate
plot.casr
Plot cumulative average survival rate
plot.del
Plot age-specific encounter rate
plot.q
Plot age-specific failure age
plot.sr
Plot age-specific nest survival rate.
plot.trace1
Trace plot 1
plot.trace2
Trace plot 2
plot.trace3
Trace plot 2
plot.trace4
Trace plot 4.

Files in this package

BEANSP
BEANSP/src
BEANSP/src/BEANSP.f
BEANSP/NAMESPACE
BEANSP/data
BEANSP/data/example1.rda
BEANSP/data/example2.rda
BEANSP/R
BEANSP/R/nestconv.R
BEANSP/R/plot.q.R
BEANSP/R/plot.trace4.R
BEANSP/R/plot.sr.R
BEANSP/R/plot.trace2.R
BEANSP/R/plot.trace3.R
BEANSP/R/plot.casr.R
BEANSP/R/nestsr.R
BEANSP/R/plot.trace1.R
BEANSP/R/plot.del.R
BEANSP/R/plot.asr.R
BEANSP/MD5
BEANSP/DESCRIPTION
BEANSP/man
BEANSP/man/BEANSP-package.Rd
BEANSP/man/plot.casr.Rd
BEANSP/man/example2.Rd
BEANSP/man/plot.q.Rd
BEANSP/man/nestsr.Rd
BEANSP/man/plot.trace2.Rd
BEANSP/man/nestconv.Rd
BEANSP/man/plot.trace1.Rd
BEANSP/man/plot.asr.Rd
BEANSP/man/plot.del.Rd
BEANSP/man/plot.trace3.Rd
BEANSP/man/example1.Rd
BEANSP/man/plot.sr.Rd
BEANSP/man/plot.trace4.Rd