BEDMatrix-class: A Class to Extract Genotypes from a PLINK .bed File
In BEDMatrix: Extract Genotypes from a PLINK .bed File
Description
Details
Slots
Methods
See Also
Examples
Description
BEDMatrix is a class that maps a
PLINK .bed file
into memory and behaves similarly to a regular matrix by
implementing key methods such as [, dim, and dimnames.
Subsets are extracted directly and on-demand from the .bed file without
loading the entire file into memory.
Details
The subsets extracted from a BEDMatrix object are coded as the
allelic dosages of the first allele in the .bim file (A1), similarly to
.raw files
generated with the --recode A argument in
PLINK).
Internally, this class is an S4 class with the following slots that should
not be relied upon in actual code: xptr, dims, dnames,
and path. The .bed file is mapped into memory using mmap on
Unix and MapViewOfFile on Windows.
Slots
xptr:-
An external pointer to the underlying C code.
dims:-
An integer vector specifying the number of samples and variants as
determined by the the accompanying
.fam and
.bim files
or by the n and p parameters of the BEDMatrix
constructor function.
dnames:-
A list describing the row names and column names of the object as
determined by the accompanying
.fam and
.bim files,
or NULL if the n and p parameters of the
BEDMatrix constructor function were provided.
path:-
A character string containing the path to the .bed file.
Methods
[:Extract parts of an object
dim:Retrieve the dimension of an object
dimnames:Retrieve the dimnames of an object
dimnames<-:Set the dimnames of an object
as.matrix:Turn the object into a matrix
is.matrix:Test if the object is a matrix
length:Get the length of an object
str:Display the internal structure of an object
show:Display the object
See Also
BEDMatrix to create a BEDMatrix object from a .bed
file, BEDMatrix-package to learn more about the
BEDMatrix package,
LinkedMatrix to link
several BEDMatrix objects together.
Examples
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# Get the path to the example .bed file
path <- system.file("extdata", "example.bed",
package = "BEDMatrix")
# Create a BEDMatrix object the example .bed file
m <- BEDMatrix(path)
# Get the dimensions of the BEDMatrix object
dim(m)
# Get the row names of the BEDMatrix object
rownames(m)
# Get the column names of the BEDMatrix object
colnames(m)
# Extract genotypes for the specified sample(s)
m[1, ]
m[1:3, ]
m["per0_per0", ]
m[c("per0_per0", "per1_per1", "per2_per2"), ]
# Extract genotypes for a particular variant
m[, 1]
m[, c("snp0_A", "snp1_C", "snp2_G")]
# Extract genotypes for the specified samples and variants
m[
c("per0_per0", "per1_per1", "per2_per2"),
c("snp0_A", "snp1_C", "snp2_G")
]
Example output
Extracting number of samples and rownames from example.fam...
Extracting number of variants and colnames from example.bim...
[1] 50 1000
[1] "per0_per0" "per1_per1" "per2_per2" "per3_per3" "per4_per4"
[6] "per5_per5" "per6_per6" "per7_per7" "per8_per8" "per9_per9"
[11] "per10_per10" "per11_per11" "per12_per12" "per13_per13" "per14_per14"
[16] "per15_per15" "per16_per16" "per17_per17" "per18_per18" "per19_per19"
[21] "per20_per20" "per21_per21" "per22_per22" "per23_per23" "per24_per24"
[26] "per25_per25" "per26_per26" "per27_per27" "per28_per28" "per29_per29"
[31] "per30_per30" "per31_per31" "per32_per32" "per33_per33" "per34_per34"
[36] "per35_per35" "per36_per36" "per37_per37" "per38_per38" "per39_per39"
[41] "per40_per40" "per41_per41" "per42_per42" "per43_per43" "per44_per44"
[46] "per45_per45" "per46_per46" "per47_per47" "per48_per48" "per49_per49"
[1] "snp0_A" "snp1_C" "snp2_G" "snp3_G" "snp4_G" "snp5_T"
[7] "snp6_G" "snp7_A" "snp8_A" "snp9_C" "snp10_A" "snp11_C"
[13] "snp12_A" "snp13_T" "snp14_A" "snp15_G" "snp16_A" "snp17_T"
[19] "snp18_C" "snp19_G" "snp20_C" "snp21_G" "snp22_G" "snp23_C"
[25] "snp24_T" "snp25_A" "snp26_G" "snp27_G" "snp28_T" "snp29_T"
[31] "snp30_T" "snp31_A" "snp32_T" "snp33_C" "snp34_T" "snp35_A"
[37] "snp36_G" "snp37_G" "snp38_T" "snp39_C" "snp40_A" "snp41_C"
[43] "snp42_T" "snp43_T" "snp44_T" "snp45_C" "snp46_C" "snp47_A"
[49] "snp48_C" "snp49_C" "snp50_T" "snp51_T" "snp52_A" "snp53_C"
[55] "snp54_T" "snp55_C" "snp56_C" "snp57_A" "snp58_A" "snp59_G"
[61] "snp60_A" "snp61_A" "snp62_G" "snp63_G" "snp64_T" "snp65_G"
[67] "snp66_C" "snp67_G" "snp68_A" "snp69_A" "snp70_C" "snp71_G"
[73] "snp72_A" "snp73_C" "snp74_G" "snp75_T" "snp76_C" "snp77_C"
[79] "snp78_C" "snp79_A" "snp80_C" "snp81_A" "snp82_T" "snp83_G"
[85] "snp84_T" "snp85_T" "snp86_G" "snp87_A" "snp88_G" "snp89_G"
[91] "snp90_C" "snp91_G" "snp92_T" "snp93_T" "snp94_T" "snp95_A"
[97] "snp96_C" "snp97_G" "snp98_A" "snp99_T" "snp100_T" "snp101_T"
[103] "snp102_T" "snp103_G" "snp104_T" "snp105_C" "snp106_T" "snp107_T"
[109] "snp108_T" "snp109_A" "snp110_A" "snp111_A" "snp112_G" "snp113_G"
[115] "snp114_T" "snp115_T" "snp116_T" "snp117_T" "snp118_C" "snp119_T"
[121] "snp120_C" "snp121_T" "snp122_C" "snp123_A" "snp124_T" "snp125_C"
[127] "snp126_C" "snp127_A" "snp128_A" "snp129_T" "snp130_T" "snp131_G"
[133] "snp132_A" "snp133_T" "snp134_A" "snp135_G" "snp136_A" "snp137_G"
[139] "snp138_A" "snp139_G" "snp140_T" "snp141_A" "snp142_T" "snp143_G"
[145] "snp144_A" "snp145_C" "snp146_C" "snp147_T" "snp148_G" "snp149_A"
[151] "snp150_C" "snp151_C" "snp152_C" "snp153_G" "snp154_A" "snp155_A"
[157] "snp156_A" "snp157_A" "snp158_T" "snp159_G" "snp160_C" "snp161_A"
[163] "snp162_T" "snp163_A" "snp164_T" "snp165_G" "snp166_T" "snp167_T"
[169] "snp168_C" "snp169_C" "snp170_A" "snp171_C" "snp172_G" "snp173_A"
[175] "snp174_A" "snp175_C" "snp176_T" "snp177_C" "snp178_A" "snp179_G"
[181] "snp180_A" "snp181_C" "snp182_A" "snp183_G" "snp184_T" "snp185_T"
[187] "snp186_T" "snp187_A" "snp188_G" "snp189_A" "snp190_C" "snp191_C"
[193] "snp192_C" "snp193_T" "snp194_A" "snp195_C" "snp196_T" "snp197_T"
[199] "snp198_A" "snp199_T" "snp200_C" "snp201_C" "snp202_C" "snp203_G"
[205] "snp204_G" "snp205_A" "snp206_T" "snp207_G" "snp208_G" "snp209_A"
[211] "snp210_A" "snp211_G" "snp212_T" "snp213_C" "snp214_A" "snp215_C"
[217] "snp216_G" "snp217_A" "snp218_G" "snp219_G" "snp220_G" "snp221_G"
[223] "snp222_A" "snp223_C" "snp224_T" "snp225_G" "snp226_C" "snp227_T"
[229] "snp228_T" "snp229_A" "snp230_G" "snp231_T" "snp232_A" "snp233_A"
[235] "snp234_G" "snp235_A" "snp236_A" "snp237_C" "snp238_A" "snp239_T"
[241] "snp240_C" "snp241_T" "snp242_T" "snp243_A" "snp244_C" "snp245_G"
[247] "snp246_A" "snp247_T" "snp248_C" "snp249_T" "snp250_T" "snp251_C"
[253] "snp252_G" "snp253_A" "snp254_C" "snp255_A" "snp256_T" "snp257_G"
[259] "snp258_A" "snp259_G" "snp260_C" "snp261_A" "snp262_A" "snp263_T"
[265] "snp264_T" "snp265_T" "snp266_A" "snp267_G" "snp268_G" "snp269_T"
[271] "snp270_T" "snp271_G" "snp272_T" "snp273_T" "snp274_A" "snp275_G"
[277] "snp276_A" "snp277_T" "snp278_T" "snp279_G" "snp280_G" "snp281_T"
[283] "snp282_A" "snp283_A" "snp284_C" "snp285_T" "snp286_T" "snp287_G"
[289] "snp288_T" "snp289_A" "snp290_T" "snp291_T" "snp292_T" "snp293_G"
[295] "snp294_G" "snp295_C" "snp296_T" "snp297_A" "snp298_C" "snp299_C"
[301] "snp300_C" "snp301_T" "snp302_A" "snp303_G" "snp304_C" "snp305_G"
[307] "snp306_C" "snp307_T" "snp308_C" "snp309_A" "snp310_C" "snp311_G"
[313] "snp312_T" "snp313_T" "snp314_C" "snp315_A" "snp316_C" "snp317_T"
[319] "snp318_T" "snp319_C" "snp320_C" "snp321_C" "snp322_T" "snp323_A"
[325] "snp324_C" "snp325_A" "snp326_A" "snp327_A" "snp328_C" "snp329_G"
[331] "snp330_G" "snp331_G" "snp332_G" "snp333_T" "snp334_A" "snp335_T"
[337] "snp336_A" "snp337_C" "snp338_C" "snp339_A" "snp340_G" "snp341_C"
[343] "snp342_T" "snp343_A" "snp344_T" "snp345_G" "snp346_C" "snp347_T"
[349] "snp348_C" "snp349_C" "snp350_C" "snp351_A" "snp352_A" "snp353_T"
[355] "snp354_G" "snp355_T" "snp356_T" "snp357_A" "snp358_A" "snp359_A"
[361] "snp360_A" "snp361_G" "snp362_A" "snp363_G" "snp364_C" "snp365_C"
[367] "snp366_A" "snp367_A" "snp368_C" "snp369_G" "snp370_T" "snp371_T"
[373] "snp372_T" "snp373_G" "snp374_G" "snp375_T" "snp376_A" "snp377_G"
[379] "snp378_G" "snp379_T" "snp380_A" "snp381_A" "snp382_T" "snp383_C"
[385] "snp384_A" "snp385_T" "snp386_C" "snp387_A" "snp388_G" "snp389_C"
[391] "snp390_T" "snp391_A" "snp392_G" "snp393_C" "snp394_T" "snp395_G"
[397] "snp396_C" "snp397_T" "snp398_C" "snp399_T" "snp400_A" "snp401_C"
[403] "snp402_T" "snp403_A" "snp404_C" "snp405_A" "snp406_G" "snp407_A"
[409] "snp408_T" "snp409_G" "snp410_A" "snp411_G" "snp412_G" "snp413_C"
[415] "snp414_T" "snp415_A" "snp416_T" "snp417_A" "snp418_G" "snp419_C"
[421] "snp420_A" "snp421_C" "snp422_G" "snp423_G" "snp424_C" "snp425_C"
[427] "snp426_G" "snp427_T" "snp428_G" "snp429_T" "snp430_A" "snp431_A"
[433] "snp432_A" "snp433_A" "snp434_G" "snp435_A" "snp436_A" "snp437_C"
[439] "snp438_T" "snp439_T" "snp440_C" "snp441_A" "snp442_C" "snp443_C"
[445] "snp444_G" "snp445_T" "snp446_C" "snp447_A" "snp448_A" "snp449_T"
[451] "snp450_A" "snp451_A" "snp452_A" "snp453_T" "snp454_T" "snp455_A"
[457] "snp456_A" "snp457_C" "snp458_A" "snp459_A" "snp460_C" "snp461_A"
[463] "snp462_T" "snp463_G" "snp464_T" "snp465_T" "snp466_A" "snp467_T"
[469] "snp468_C" "snp469_T" "snp470_C" "snp471_G" "snp472_A" "snp473_C"
[475] "snp474_A" "snp475_A" "snp476_T" "snp477_C" "snp478_G" "snp479_A"
[481] "snp480_T" "snp481_G" "snp482_T" "snp483_C" "snp484_A" "snp485_G"
[487] "snp486_G" "snp487_T" "snp488_A" "snp489_C" "snp490_A" "snp491_A"
[493] "snp492_C" "snp493_C" "snp494_T" "snp495_A" "snp496_A" "snp497_A"
[499] "snp498_T" "snp499_A" "snp500_T" "snp501_G" "snp502_A" "snp503_T"
[505] "snp504_G" "snp505_T" "snp506_C" "snp507_C" "snp508_A" "snp509_C"
[511] "snp510_A" "snp511_A" "snp512_G" "snp513_C" "snp514_C" "snp515_G"
[517] "snp516_A" "snp517_C" "snp518_G" "snp519_C" "snp520_C" "snp521_A"
[523] "snp522_A" "snp523_T" "snp524_A" "snp525_C" "snp526_G" "snp527_A"
[529] "snp528_T" "snp529_C" "snp530_T" "snp531_C" "snp532_A" "snp533_A"
[535] "snp534_C" "snp535_A" "snp536_A" "snp537_C" "snp538_T" "snp539_G"
[541] "snp540_C" "snp541_G" "snp542_A" "snp543_G" "snp544_T" "snp545_C"
[547] "snp546_T" "snp547_C" "snp548_C" "snp549_G" "snp550_A" "snp551_C"
[553] "snp552_A" "snp553_A" "snp554_C" "snp555_G" "snp556_G" "snp557_C"
[559] "snp558_G" "snp559_G" "snp560_T" "snp561_C" "snp562_T" "snp563_T"
[565] "snp564_G" "snp565_C" "snp566_T" "snp567_C" "snp568_T" "snp569_T"
[571] "snp570_C" "snp571_A" "snp572_A" "snp573_A" "snp574_T" "snp575_T"
[577] "snp576_G" "snp577_A" "snp578_T" "snp579_G" "snp580_C" "snp581_C"
[583] "snp582_T" "snp583_G" "snp584_A" "snp585_G" "snp586_G" "snp587_G"
[589] "snp588_C" "snp589_C" "snp590_G" "snp591_C" "snp592_G" "snp593_G"
[595] "snp594_G" "snp595_A" "snp596_A" "snp597_T" "snp598_T" "snp599_C"
[601] "snp600_A" "snp601_A" "snp602_A" "snp603_A" "snp604_G" "snp605_A"
[607] "snp606_G" "snp607_C" "snp608_C" "snp609_T" "snp610_C" "snp611_C"
[613] "snp612_G" "snp613_A" "snp614_T" "snp615_A" "snp616_C" "snp617_G"
[619] "snp618_C" "snp619_G" "snp620_C" "snp621_C" "snp622_C" "snp623_C"
[625] "snp624_A" "snp625_T" "snp626_T" "snp627_A" "snp628_T" "snp629_A"
[631] "snp630_C" "snp631_G" "snp632_T" "snp633_C" "snp634_A" "snp635_G"
[637] "snp636_G" "snp637_A" "snp638_A" "snp639_G" "snp640_T" "snp641_T"
[643] "snp642_T" "snp643_G" "snp644_C" "snp645_G" "snp646_A" "snp647_T"
[649] "snp648_G" "snp649_G" "snp650_G" "snp651_A" "snp652_C" "snp653_C"
[655] "snp654_T" "snp655_T" "snp656_A" "snp657_G" "snp658_C" "snp659_T"
[661] "snp660_C" "snp661_T" "snp662_T" "snp663_A" "snp664_A" "snp665_G"
[667] "snp666_G" "snp667_C" "snp668_T" "snp669_C" "snp670_C" "snp671_G"
[673] "snp672_C" "snp673_A" "snp674_T" "snp675_C" "snp676_G" "snp677_C"
[679] "snp678_T" "snp679_T" "snp680_T" "snp681_T" "snp682_G" "snp683_C"
[685] "snp684_A" "snp685_A" "snp686_G" "snp687_A" "snp688_C" "snp689_C"
[691] "snp690_G" "snp691_G" "snp692_G" "snp693_G" "snp694_G" "snp695_G"
[697] "snp696_T" "snp697_C" "snp698_C" "snp699_G" "snp700_T" "snp701_C"
[703] "snp702_T" "snp703_T" "snp704_T" "snp705_T" "snp706_G" "snp707_G"
[709] "snp708_A" "snp709_T" "snp710_T" "snp711_C" "snp712_T" "snp713_A"
[715] "snp714_G" "snp715_T" "snp716_A" "snp717_C" "snp718_G" "snp719_G"
[721] "snp720_A" "snp721_G" "snp722_G" "snp723_A" "snp724_C" "snp725_G"
[727] "snp726_A" "snp727_A" "snp728_G" "snp729_T" "snp730_G" "snp731_A"
[733] "snp732_G" "snp733_T" "snp734_A" "snp735_G" "snp736_G" "snp737_G"
[739] "snp738_T" "snp739_C" "snp740_A" "snp741_A" "snp742_G" "snp743_C"
[745] "snp744_C" "snp745_T" "snp746_C" "snp747_G" "snp748_A" "snp749_A"
[751] "snp750_C" "snp751_C" "snp752_A" "snp753_G" "snp754_G" "snp755_A"
[757] "snp756_T" "snp757_C" "snp758_C" "snp759_T" "snp760_C" "snp761_T"
[763] "snp762_C" "snp763_T" "snp764_G" "snp765_A" "snp766_C" "snp767_C"
[769] "snp768_C" "snp769_C" "snp770_C" "snp771_T" "snp772_T" "snp773_G"
[775] "snp774_A" "snp775_C" "snp776_C" "snp777_A" "snp778_G" "snp779_T"
[781] "snp780_C" "snp781_T" "snp782_G" "snp783_C" "snp784_A" "snp785_T"
[787] "snp786_G" "snp787_G" "snp788_C" "snp789_G" "snp790_G" "snp791_C"
[793] "snp792_T" "snp793_T" "snp794_C" "snp795_A" "snp796_T" "snp797_C"
[799] "snp798_T" "snp799_T" "snp800_T" "snp801_A" "snp802_G" "snp803_T"
[805] "snp804_T" "snp805_G" "snp806_G" "snp807_A" "snp808_G" "snp809_T"
[811] "snp810_G" "snp811_A" "snp812_C" "snp813_T" "snp814_T" "snp815_G"
[817] "snp816_A" "snp817_T" "snp818_G" "snp819_A" "snp820_C" "snp821_A"
[823] "snp822_T" "snp823_G" "snp824_C" "snp825_T" "snp826_A" "snp827_A"
[829] "snp828_G" "snp829_T" "snp830_T" "snp831_C" "snp832_A" "snp833_C"
[835] "snp834_A" "snp835_G" "snp836_G" "snp837_A" "snp838_T" "snp839_T"
[841] "snp840_C" "snp841_C" "snp842_A" "snp843_T" "snp844_G" "snp845_C"
[847] "snp846_A" "snp847_G" "snp848_G" "snp849_A" "snp850_G" "snp851_G"
[853] "snp852_G" "snp853_A" "snp854_A" "snp855_C" "snp856_A" "snp857_T"
[859] "snp858_G" "snp859_A" "snp860_G" "snp861_T" "snp862_T" "snp863_C"
[865] "snp864_G" "snp865_A" "snp866_G" "snp867_C" "snp868_T" "snp869_A"
[871] "snp870_A" "snp871_C" "snp872_A" "snp873_T" "snp874_T" "snp875_C"
[877] "snp876_T" "snp877_G" "snp878_C" "snp879_G" "snp880_G" "snp881_C"
[883] "snp882_T" "snp883_C" "snp884_G" "snp885_G" "snp886_G" "snp887_C"
[889] "snp888_C" "snp889_T" "snp890_A" "snp891_T" "snp892_G" "snp893_T"
[895] "snp894_A" "snp895_C" "snp896_G" "snp897_G" "snp898_T" "snp899_A"
[901] "snp900_C" "snp901_T" "snp902_G" "snp903_T" "snp904_T" "snp905_C"
[907] "snp906_A" "snp907_C" "snp908_T" "snp909_T" "snp910_A" "snp911_T"
[913] "snp912_G" "snp913_T" "snp914_T" "snp915_A" "snp916_T" "snp917_C"
[919] "snp918_G" "snp919_C" "snp920_G" "snp921_T" "snp922_G" "snp923_A"
[925] "snp924_C" "snp925_A" "snp926_T" "snp927_C" "snp928_G" "snp929_G"
[931] "snp930_A" "snp931_C" "snp932_T" "snp933_G" "snp934_G" "snp935_C"
[937] "snp936_A" "snp937_T" "snp938_G" "snp939_C" "snp940_C" "snp941_T"
[943] "snp942_G" "snp943_G" "snp944_T" "snp945_T" "snp946_A" "snp947_A"
[949] "snp948_A" "snp949_A" "snp950_C" "snp951_T" "snp952_G" "snp953_G"
[955] "snp954_G" "snp955_A" "snp956_T" "snp957_T" "snp958_T" "snp959_G"
[961] "snp960_T" "snp961_A" "snp962_C" "snp963_T" "snp964_A" "snp965_G"
[967] "snp966_A" "snp967_C" "snp968_T" "snp969_A" "snp970_G" "snp971_C"
[973] "snp972_G" "snp973_A" "snp974_A" "snp975_G" "snp976_T" "snp977_T"
[979] "snp978_A" "snp979_A" "snp980_A" "snp981_T" "snp982_T" "snp983_C"
[985] "snp984_G" "snp985_C" "snp986_C" "snp987_C" "snp988_C" "snp989_T"
[991] "snp990_G" "snp991_A" "snp992_T" "snp993_C" "snp994_T" "snp995_T"
[997] "snp996_G" "snp997_T" "snp998_C" "snp999_G"
snp0_A snp1_C snp2_G snp3_G snp4_G snp5_T snp6_G snp7_A
0 1 1 1 0 2 1 0
snp8_A snp9_C snp10_A snp11_C snp12_A snp13_T snp14_A snp15_G
0 1 1 1 1 1 0 1
snp16_A snp17_T snp18_C snp19_G snp20_C snp21_G snp22_G snp23_C
1 1 0 1 1 2 0 NA
snp24_T snp25_A snp26_G snp27_G snp28_T snp29_T snp30_T snp31_A
0 1 1 1 2 1 1 1
snp32_T snp33_C snp34_T snp35_A snp36_G snp37_G snp38_T snp39_C
0 0 1 1 1 2 0 0
snp40_A snp41_C snp42_T snp43_T snp44_T snp45_C snp46_C snp47_A
2 1 0 0 1 0 0 NA
snp48_C snp49_C snp50_T snp51_T snp52_A snp53_C snp54_T snp55_C
2 2 1 0 1 1 2 2
snp56_C snp57_A snp58_A snp59_G snp60_A snp61_A snp62_G snp63_G
1 1 1 1 2 2 1 2
snp64_T snp65_G snp66_C snp67_G snp68_A snp69_A snp70_C snp71_G
0 1 1 1 0 1 2 2
snp72_A snp73_C snp74_G snp75_T snp76_C snp77_C snp78_C snp79_A
2 0 1 1 1 2 1 2
snp80_C snp81_A snp82_T snp83_G snp84_T snp85_T snp86_G snp87_A
2 1 0 1 0 1 1 2
snp88_G snp89_G snp90_C snp91_G snp92_T snp93_T snp94_T snp95_A
2 1 2 1 0 0 0 1
snp96_C snp97_G snp98_A snp99_T snp100_T snp101_T snp102_T snp103_G
0 2 2 2 2 0 NA 0
snp104_T snp105_C snp106_T snp107_T snp108_T snp109_A snp110_A snp111_A
1 1 1 1 0 0 0 1
snp112_G snp113_G snp114_T snp115_T snp116_T snp117_T snp118_C snp119_T
0 0 0 2 1 0 1 1
snp120_C snp121_T snp122_C snp123_A snp124_T snp125_C snp126_C snp127_A
0 1 0 1 NA NA 1 1
snp128_A snp129_T snp130_T snp131_G snp132_A snp133_T snp134_A snp135_G
1 0 0 1 0 1 0 2
snp136_A snp137_G snp138_A snp139_G snp140_T snp141_A snp142_T snp143_G
1 0 1 1 0 1 0 1
snp144_A snp145_C snp146_C snp147_T snp148_G snp149_A snp150_C snp151_C
1 0 1 1 0 1 1 2
snp152_C snp153_G snp154_A snp155_A snp156_A snp157_A snp158_T snp159_G
1 2 2 0 0 2 2 0
snp160_C snp161_A snp162_T snp163_A snp164_T snp165_G snp166_T snp167_T
1 1 2 1 0 0 2 2
snp168_C snp169_C snp170_A snp171_C snp172_G snp173_A snp174_A snp175_C
0 1 1 2 1 0 0 1
snp176_T snp177_C snp178_A snp179_G snp180_A snp181_C snp182_A snp183_G
1 0 0 2 0 0 1 1
snp184_T snp185_T snp186_T snp187_A snp188_G snp189_A snp190_C snp191_C
1 2 1 0 2 2 1 1
snp192_C snp193_T snp194_A snp195_C snp196_T snp197_T snp198_A snp199_T
1 1 1 1 0 0 1 0
snp200_C snp201_C snp202_C snp203_G snp204_G snp205_A snp206_T snp207_G
2 1 1 0 1 1 NA 2
snp208_G snp209_A snp210_A snp211_G snp212_T snp213_C snp214_A snp215_C
1 0 1 1 0 0 1 1
snp216_G snp217_A snp218_G snp219_G snp220_G snp221_G snp222_A snp223_C
2 0 0 1 0 1 1 1
snp224_T snp225_G snp226_C snp227_T snp228_T snp229_A snp230_G snp231_T
1 1 1 1 1 1 2 2
snp232_A snp233_A snp234_G snp235_A snp236_A snp237_C snp238_A snp239_T
0 0 2 1 0 1 0 1
snp240_C snp241_T snp242_T snp243_A snp244_C snp245_G snp246_A snp247_T
1 2 1 0 2 2 1 0
snp248_C snp249_T snp250_T snp251_C snp252_G snp253_A snp254_C snp255_A
2 0 2 1 0 1 2 0
snp256_T snp257_G snp258_A snp259_G snp260_C snp261_A snp262_A snp263_T
1 1 1 1 1 1 1 1
snp264_T snp265_T snp266_A snp267_G snp268_G snp269_T snp270_T snp271_G
1 2 0 0 1 1 2 0
snp272_T snp273_T snp274_A snp275_G snp276_A snp277_T snp278_T snp279_G
0 0 1 1 1 1 1 0
snp280_G snp281_T snp282_A snp283_A snp284_C snp285_T snp286_T snp287_G
0 0 0 2 1 1 1 1
snp288_T snp289_A snp290_T snp291_T snp292_T snp293_G snp294_G snp295_C
1 1 2 1 0 2 1 1
snp296_T snp297_A snp298_C snp299_C snp300_C snp301_T snp302_A snp303_G
0 1 1 1 1 NA 1 0
snp304_C snp305_G snp306_C snp307_T snp308_C snp309_A snp310_C snp311_G
2 0 1 0 1 1 2 0
snp312_T snp313_T snp314_C snp315_A snp316_C snp317_T snp318_T snp319_C
1 1 1 2 0 1 1 1
snp320_C snp321_C snp322_T snp323_A snp324_C snp325_A snp326_A snp327_A
1 0 1 2 1 1 0 1
snp328_C snp329_G snp330_G snp331_G snp332_G snp333_T snp334_A snp335_T
2 0 0 2 1 2 2 2
snp336_A snp337_C snp338_C snp339_A snp340_G snp341_C snp342_T snp343_A
0 1 0 1 2 0 1 1
snp344_T snp345_G snp346_C snp347_T snp348_C snp349_C snp350_C snp351_A
2 0 0 1 1 1 2 1
snp352_A snp353_T snp354_G snp355_T snp356_T snp357_A snp358_A snp359_A
2 1 2 1 2 2 1 0
snp360_A snp361_G snp362_A snp363_G snp364_C snp365_C snp366_A snp367_A
1 1 1 1 1 0 1 1
snp368_C snp369_G snp370_T snp371_T snp372_T snp373_G snp374_G snp375_T
0 0 1 1 0 1 1 1
snp376_A snp377_G snp378_G snp379_T snp380_A snp381_A snp382_T snp383_C
0 2 1 1 0 1 0 1
snp384_A snp385_T snp386_C snp387_A snp388_G snp389_C snp390_T snp391_A
1 0 1 2 1 1 1 2
snp392_G snp393_C snp394_T snp395_G snp396_C snp397_T snp398_C snp399_T
1 2 0 0 1 2 0 2
snp400_A snp401_C snp402_T snp403_A snp404_C snp405_A snp406_G snp407_A
1 2 1 0 1 0 1 0
snp408_T snp409_G snp410_A snp411_G snp412_G snp413_C snp414_T snp415_A
2 1 1 1 1 0 1 1
snp416_T snp417_A snp418_G snp419_C snp420_A snp421_C snp422_G snp423_G
1 0 1 0 1 1 2 2
snp424_C snp425_C snp426_G snp427_T snp428_G snp429_T snp430_A snp431_A
0 1 1 1 0 1 1 0
snp432_A snp433_A snp434_G snp435_A snp436_A snp437_C snp438_T snp439_T
2 2 0 2 2 1 2 1
snp440_C snp441_A snp442_C snp443_C snp444_G snp445_T snp446_C snp447_A
1 1 0 1 1 0 1 2
snp448_A snp449_T snp450_A snp451_A snp452_A snp453_T snp454_T snp455_A
0 0 1 0 1 1 2 1
snp456_A snp457_C snp458_A snp459_A snp460_C snp461_A snp462_T snp463_G
2 1 2 1 2 0 1 0
snp464_T snp465_T snp466_A snp467_T snp468_C snp469_T snp470_C snp471_G
2 0 2 1 2 1 1 1
snp472_A snp473_C snp474_A snp475_A snp476_T snp477_C snp478_G snp479_A
1 1 2 1 1 1 0 1
snp480_T snp481_G snp482_T snp483_C snp484_A snp485_G snp486_G snp487_T
1 0 1 1 2 1 2 1
snp488_A snp489_C snp490_A snp491_A snp492_C snp493_C snp494_T snp495_A
2 0 0 1 2 0 1 1
snp496_A snp497_A snp498_T snp499_A snp500_T snp501_G snp502_A snp503_T
1 1 1 2 1 0 0 1
snp504_G snp505_T snp506_C snp507_C snp508_A snp509_C snp510_A snp511_A
1 0 0 1 1 1 1 1
snp512_G snp513_C snp514_C snp515_G snp516_A snp517_C snp518_G snp519_C
0 2 1 1 2 2 2 2
snp520_C snp521_A snp522_A snp523_T snp524_A snp525_C snp526_G snp527_A
1 1 2 1 1 1 1 2
snp528_T snp529_C snp530_T snp531_C snp532_A snp533_A snp534_C snp535_A
1 2 0 0 1 0 2 1
snp536_A snp537_C snp538_T snp539_G snp540_C snp541_G snp542_A snp543_G
0 1 1 0 1 1 2 2
snp544_T snp545_C snp546_T snp547_C snp548_C snp549_G snp550_A snp551_C
0 2 2 1 0 1 1 0
snp552_A snp553_A snp554_C snp555_G snp556_G snp557_C snp558_G snp559_G
1 1 2 0 1 1 0 1
snp560_T snp561_C snp562_T snp563_T snp564_G snp565_C snp566_T snp567_C
2 2 2 2 0 0 0 1
snp568_T snp569_T snp570_C snp571_A snp572_A snp573_A snp574_T snp575_T
0 1 1 1 0 2 1 1
snp576_G snp577_A snp578_T snp579_G snp580_C snp581_C snp582_T snp583_G
0 2 1 1 0 2 0 1
snp584_A snp585_G snp586_G snp587_G snp588_C snp589_C snp590_G snp591_C
1 0 2 2 2 2 0 1
snp592_G snp593_G snp594_G snp595_A snp596_A snp597_T snp598_T snp599_C
1 0 0 NA 1 1 0 2
snp600_A snp601_A snp602_A snp603_A snp604_G snp605_A snp606_G snp607_C
1 0 NA 1 0 0 1 1
snp608_C snp609_T snp610_C snp611_C snp612_G snp613_A snp614_T snp615_A
0 2 0 0 1 1 0 1
snp616_C snp617_G snp618_C snp619_G snp620_C snp621_C snp622_C snp623_C
1 1 0 2 1 0 0 0
snp624_A snp625_T snp626_T snp627_A snp628_T snp629_A snp630_C snp631_G
1 0 1 1 0 NA 0 1
snp632_T snp633_C snp634_A snp635_G snp636_G snp637_A snp638_A snp639_G
1 1 0 0 1 1 1 0
snp640_T snp641_T snp642_T snp643_G snp644_C snp645_G snp646_A snp647_T
2 2 1 2 2 1 0 0
snp648_G snp649_G snp650_G snp651_A snp652_C snp653_C snp654_T snp655_T
1 0 1 1 2 1 1 0
snp656_A snp657_G snp658_C snp659_T snp660_C snp661_T snp662_T snp663_A
2 2 2 1 1 1 0 1
snp664_A snp665_G snp666_G snp667_C snp668_T snp669_C snp670_C snp671_G
1 2 0 0 1 1 0 2
snp672_C snp673_A snp674_T snp675_C snp676_G snp677_C snp678_T snp679_T
0 1 1 1 0 1 0 1
snp680_T snp681_T snp682_G snp683_C snp684_A snp685_A snp686_G snp687_A
2 0 2 1 1 0 1 1
snp688_C snp689_C snp690_G snp691_G snp692_G snp693_G snp694_G snp695_G
0 NA 0 1 0 0 1 2
snp696_T snp697_C snp698_C snp699_G snp700_T snp701_C snp702_T snp703_T
1 0 2 0 1 0 0 0
snp704_T snp705_T snp706_G snp707_G snp708_A snp709_T snp710_T snp711_C
1 1 NA 1 0 0 0 1
snp712_T snp713_A snp714_G snp715_T snp716_A snp717_C snp718_G snp719_G
0 2 0 1 1 2 1 0
snp720_A snp721_G snp722_G snp723_A snp724_C snp725_G snp726_A snp727_A
NA 1 1 1 1 0 0 0
snp728_G snp729_T snp730_G snp731_A snp732_G snp733_T snp734_A snp735_G
0 2 0 0 1 1 0 0
snp736_G snp737_G snp738_T snp739_C snp740_A snp741_A snp742_G snp743_C
1 0 1 2 1 0 0 1
snp744_C snp745_T snp746_C snp747_G snp748_A snp749_A snp750_C snp751_C
2 2 2 2 1 0 0 0
snp752_A snp753_G snp754_G snp755_A snp756_T snp757_C snp758_C snp759_T
1 1 1 0 1 0 2 0
snp760_C snp761_T snp762_C snp763_T snp764_G snp765_A snp766_C snp767_C
0 2 1 2 0 2 1 1
snp768_C snp769_C snp770_C snp771_T snp772_T snp773_G snp774_A snp775_C
0 0 2 1 0 1 0 2
snp776_C snp777_A snp778_G snp779_T snp780_C snp781_T snp782_G snp783_C
0 0 0 2 1 2 1 1
snp784_A snp785_T snp786_G snp787_G snp788_C snp789_G snp790_G snp791_C
2 1 0 0 0 1 NA 2
snp792_T snp793_T snp794_C snp795_A snp796_T snp797_C snp798_T snp799_T
0 2 1 2 1 0 1 0
snp800_T snp801_A snp802_G snp803_T snp804_T snp805_G snp806_G snp807_A
1 1 1 1 1 0 2 1
snp808_G snp809_T snp810_G snp811_A snp812_C snp813_T snp814_T snp815_G
1 0 1 0 2 1 1 1
snp816_A snp817_T snp818_G snp819_A snp820_C snp821_A snp822_T snp823_G
1 0 1 0 0 1 2 1
snp824_C snp825_T snp826_A snp827_A snp828_G snp829_T snp830_T snp831_C
0 0 0 1 1 0 0 0
snp832_A snp833_C snp834_A snp835_G snp836_G snp837_A snp838_T snp839_T
2 1 1 1 1 1 1 2
snp840_C snp841_C snp842_A snp843_T snp844_G snp845_C snp846_A snp847_G
0 1 0 0 1 1 1 NA
snp848_G snp849_A snp850_G snp851_G snp852_G snp853_A snp854_A snp855_C
1 1 1 0 1 0 0 2
snp856_A snp857_T snp858_G snp859_A snp860_G snp861_T snp862_T snp863_C
1 0 0 1 1 0 0 1
snp864_G snp865_A snp866_G snp867_C snp868_T snp869_A snp870_A snp871_C
1 1 1 1 1 1 1 1
snp872_A snp873_T snp874_T snp875_C snp876_T snp877_G snp878_C snp879_G
0 2 2 0 1 0 0 0
snp880_G snp881_C snp882_T snp883_C snp884_G snp885_G snp886_G snp887_C
1 1 1 0 1 1 1 1
snp888_C snp889_T snp890_A snp891_T snp892_G snp893_T snp894_A snp895_C
1 2 1 0 0 1 0 1
snp896_G snp897_G snp898_T snp899_A snp900_C snp901_T snp902_G snp903_T
0 0 1 2 1 0 0 1
snp904_T snp905_C snp906_A snp907_C snp908_T snp909_T snp910_A snp911_T
1 0 2 1 2 NA 1 1
snp912_G snp913_T snp914_T snp915_A snp916_T snp917_C snp918_G snp919_C
2 2 0 1 0 1 0 1
snp920_G snp921_T snp922_G snp923_A snp924_C snp925_A snp926_T snp927_C
1 0 0 1 1 1 NA 1
snp928_G snp929_G snp930_A snp931_C snp932_T snp933_G snp934_G snp935_C
2 2 0 1 2 2 1 2
snp936_A snp937_T snp938_G snp939_C snp940_C snp941_T snp942_G snp943_G
2 1 1 0 1 1 2 1
snp944_T snp945_T snp946_A snp947_A snp948_A snp949_A snp950_C snp951_T
1 2 1 0 1 2 0 1
snp952_G snp953_G snp954_G snp955_A snp956_T snp957_T snp958_T snp959_G
1 2 1 1 1 1 2 0
snp960_T snp961_A snp962_C snp963_T snp964_A snp965_G snp966_A snp967_C
0 1 2 2 0 1 0 0
snp968_T snp969_A snp970_G snp971_C snp972_G snp973_A snp974_A snp975_G
0 1 1 1 0 2 1 1
snp976_T snp977_T snp978_A snp979_A snp980_A snp981_T snp982_T snp983_C
1 0 1 0 0 1 1 1
snp984_G snp985_C snp986_C snp987_C snp988_C snp989_T snp990_G snp991_A
2 0 1 1 1 2 1 1
snp992_T snp993_C snp994_T snp995_T snp996_G snp997_T snp998_C snp999_G
0 2 1 1 1 0 1 NA
snp0_A snp1_C snp2_G snp3_G snp4_G snp5_T snp6_G snp7_A snp8_A snp9_C
per0_per0 0 1 1 1 0 2 1 0 0 1
per1_per1 1 1 1 1 NA 2 2 2 1 1
per2_per2 1 0 0 2 0 0 1 2 0 1
snp10_A snp11_C snp12_A snp13_T snp14_A snp15_G snp16_A snp17_T
per0_per0 1 1 1 1 0 1 1 1
per1_per1 2 1 1 1 2 0 0 1
per2_per2 2 2 1 2 0 1 0 1
snp18_C snp19_G snp20_C snp21_G snp22_G snp23_C snp24_T snp25_A
per0_per0 0 1 1 2 0 NA 0 1
per1_per1 1 0 0 2 1 0 1 2
per2_per2 1 2 2 1 NA 0 1 2
snp26_G snp27_G snp28_T snp29_T snp30_T snp31_A snp32_T snp33_C
per0_per0 1 1 2 1 1 1 0 0
per1_per1 2 0 1 0 1 0 0 0
per2_per2 2 2 2 2 0 0 2 0
snp34_T snp35_A snp36_G snp37_G snp38_T snp39_C snp40_A snp41_C
per0_per0 1 1 1 2 0 0 2 1
per1_per1 1 1 0 1 2 1 1 0
per2_per2 0 1 1 1 1 2 0 1
snp42_T snp43_T snp44_T snp45_C snp46_C snp47_A snp48_C snp49_C
per0_per0 0 0 1 0 0 NA 2 2
per1_per1 1 1 1 0 2 1 1 1
per2_per2 1 2 0 1 1 1 0 0
snp50_T snp51_T snp52_A snp53_C snp54_T snp55_C snp56_C snp57_A
per0_per0 1 0 1 1 2 2 1 1
per1_per1 2 1 2 0 2 0 1 2
per2_per2 1 0 2 1 1 1 0 1
snp58_A snp59_G snp60_A snp61_A snp62_G snp63_G snp64_T snp65_G
per0_per0 1 1 2 2 1 2 0 1
per1_per1 0 0 2 1 0 1 2 1
per2_per2 1 1 0 2 1 1 0 1
snp66_C snp67_G snp68_A snp69_A snp70_C snp71_G snp72_A snp73_C
per0_per0 1 1 0 1 2 2 2 0
per1_per1 1 1 1 1 1 1 1 1
per2_per2 0 1 1 2 1 2 NA 0
snp74_G snp75_T snp76_C snp77_C snp78_C snp79_A snp80_C snp81_A
per0_per0 1 1 1 2 1 2 2 1
per1_per1 2 0 1 2 1 2 2 1
per2_per2 1 1 1 2 0 0 1 0
snp82_T snp83_G snp84_T snp85_T snp86_G snp87_A snp88_G snp89_G
per0_per0 0 1 0 1 1 2 2 1
per1_per1 1 1 0 1 1 0 2 1
per2_per2 0 2 2 0 0 0 2 1
snp90_C snp91_G snp92_T snp93_T snp94_T snp95_A snp96_C snp97_G
per0_per0 2 1 0 0 0 1 0 2
per1_per1 2 1 2 1 1 1 0 1
per2_per2 1 1 0 1 1 1 1 1
snp98_A snp99_T snp100_T snp101_T snp102_T snp103_G snp104_T snp105_C
per0_per0 2 2 2 0 NA 0 1 1
per1_per1 NA 1 2 0 1 1 2 0
per2_per2 0 1 1 2 2 2 1 2
snp106_T snp107_T snp108_T snp109_A snp110_A snp111_A snp112_G
per0_per0 1 1 0 0 0 1 0
per1_per1 1 1 1 1 1 2 1
per2_per2 2 0 1 0 1 0 1
snp113_G snp114_T snp115_T snp116_T snp117_T snp118_C snp119_T
per0_per0 0 0 2 1 0 1 1
per1_per1 0 1 1 0 0 0 0
per2_per2 1 2 2 0 1 1 1
snp120_C snp121_T snp122_C snp123_A snp124_T snp125_C snp126_C
per0_per0 0 1 0 1 NA NA 1
per1_per1 1 2 2 1 1 1 1
per2_per2 0 0 0 1 0 1 0
snp127_A snp128_A snp129_T snp130_T snp131_G snp132_A snp133_T
per0_per0 1 1 0 0 1 0 1
per1_per1 0 1 1 1 0 0 2
per2_per2 0 1 1 1 1 1 0
snp134_A snp135_G snp136_A snp137_G snp138_A snp139_G snp140_T
per0_per0 0 2 1 0 1 1 0
per1_per1 0 1 1 1 0 1 1
per2_per2 1 0 2 1 2 1 2
snp141_A snp142_T snp143_G snp144_A snp145_C snp146_C snp147_T
per0_per0 1 0 1 1 0 1 1
per1_per1 0 0 2 2 1 0 0
per2_per2 0 1 1 0 1 0 2
snp148_G snp149_A snp150_C snp151_C snp152_C snp153_G snp154_A
per0_per0 0 1 1 2 1 2 2
per1_per1 1 1 2 1 1 2 1
per2_per2 2 1 1 1 0 1 0
snp155_A snp156_A snp157_A snp158_T snp159_G snp160_C snp161_A
per0_per0 0 0 2 2 0 1 1
per1_per1 1 2 1 2 2 2 1
per2_per2 0 0 2 0 1 0 1
snp162_T snp163_A snp164_T snp165_G snp166_T snp167_T snp168_C
per0_per0 2 1 0 0 2 2 0
per1_per1 2 1 1 1 1 1 1
per2_per2 1 0 1 1 1 1 1
snp169_C snp170_A snp171_C snp172_G snp173_A snp174_A snp175_C
per0_per0 1 1 2 1 0 0 1
per1_per1 1 1 2 1 1 NA 1
per2_per2 2 0 0 2 1 1 0
snp176_T snp177_C snp178_A snp179_G snp180_A snp181_C snp182_A
per0_per0 1 0 0 2 0 0 1
per1_per1 0 NA 2 0 0 1 0
per2_per2 2 1 1 0 1 1 0
snp183_G snp184_T snp185_T snp186_T snp187_A snp188_G snp189_A
per0_per0 1 1 2 1 0 2 2
per1_per1 NA 1 1 0 1 1 1
per2_per2 0 1 1 1 1 0 0
snp190_C snp191_C snp192_C snp193_T snp194_A snp195_C snp196_T
per0_per0 1 1 1 1 1 1 0
per1_per1 1 0 1 2 1 2 2
per2_per2 1 1 0 1 1 2 2
snp197_T snp198_A snp199_T snp200_C snp201_C snp202_C snp203_G
per0_per0 0 1 0 2 1 1 0
per1_per1 0 1 2 2 0 2 1
per2_per2 1 1 2 1 2 2 0
snp204_G snp205_A snp206_T snp207_G snp208_G snp209_A snp210_A
per0_per0 1 1 NA 2 1 0 1
per1_per1 1 1 2 0 0 1 2
per2_per2 1 1 0 2 0 0 1
snp211_G snp212_T snp213_C snp214_A snp215_C snp216_G snp217_A
per0_per0 1 0 0 1 1 2 0
per1_per1 1 2 0 1 1 0 1
per2_per2 1 0 1 0 0 2 NA
snp218_G snp219_G snp220_G snp221_G snp222_A snp223_C snp224_T
per0_per0 0 1 0 1 1 1 1
per1_per1 1 2 2 1 2 0 2
per2_per2 1 1 0 0 NA 2 1
snp225_G snp226_C snp227_T snp228_T snp229_A snp230_G snp231_T
per0_per0 1 1 1 1 1 2 2
per1_per1 2 0 2 1 1 0 2
per2_per2 1 0 2 1 0 1 1
snp232_A snp233_A snp234_G snp235_A snp236_A snp237_C snp238_A
per0_per0 0 0 2 1 0 1 0
per1_per1 1 1 0 0 0 1 1
per2_per2 1 2 1 0 1 2 0
snp239_T snp240_C snp241_T snp242_T snp243_A snp244_C snp245_G
per0_per0 1 1 2 1 0 2 2
per1_per1 2 1 1 1 1 2 0
per2_per2 1 1 0 1 0 1 1
snp246_A snp247_T snp248_C snp249_T snp250_T snp251_C snp252_G
per0_per0 1 0 2 0 2 1 0
per1_per1 2 0 0 0 1 1 1
per2_per2 0 1 1 1 NA 1 1
snp253_A snp254_C snp255_A snp256_T snp257_G snp258_A snp259_G
per0_per0 1 2 0 1 1 1 1
per1_per1 1 2 0 1 0 1 2
per2_per2 0 2 0 1 1 2 1
snp260_C snp261_A snp262_A snp263_T snp264_T snp265_T snp266_A
per0_per0 1 1 1 1 1 2 0
per1_per1 0 2 0 1 1 1 0
per2_per2 1 0 1 1 2 2 1
snp267_G snp268_G snp269_T snp270_T snp271_G snp272_T snp273_T
per0_per0 0 1 1 2 0 0 0
per1_per1 1 1 NA 0 1 1 1
per2_per2 2 0 1 2 0 0 2
snp274_A snp275_G snp276_A snp277_T snp278_T snp279_G snp280_G
per0_per0 1 1 1 1 1 0 0
per1_per1 1 0 2 0 1 1 2
per2_per2 1 1 1 2 0 0 2
snp281_T snp282_A snp283_A snp284_C snp285_T snp286_T snp287_G
per0_per0 0 0 2 1 1 1 1
per1_per1 0 1 1 2 0 0 0
per2_per2 1 1 1 1 1 1 1
snp288_T snp289_A snp290_T snp291_T snp292_T snp293_G snp294_G
per0_per0 1 1 2 1 0 2 1
per1_per1 0 2 1 2 1 0 2
per2_per2 1 1 1 2 1 0 2
snp295_C snp296_T snp297_A snp298_C snp299_C snp300_C snp301_T
per0_per0 1 0 1 1 1 1 NA
per1_per1 1 0 0 2 2 1 1
per2_per2 1 1 1 1 2 2 1
snp302_A snp303_G snp304_C snp305_G snp306_C snp307_T snp308_C
per0_per0 1 0 2 0 1 0 1
per1_per1 0 0 0 0 1 1 1
per2_per2 1 2 1 1 1 1 0
snp309_A snp310_C snp311_G snp312_T snp313_T snp314_C snp315_A
per0_per0 1 2 0 1 1 1 2
per1_per1 1 2 1 1 0 1 1
per2_per2 1 1 1 1 1 0 0
snp316_C snp317_T snp318_T snp319_C snp320_C snp321_C snp322_T
per0_per0 0 1 1 1 1 0 1
per1_per1 1 1 2 1 0 0 0
per2_per2 1 1 1 0 1 2 1
snp323_A snp324_C snp325_A snp326_A snp327_A snp328_C snp329_G
per0_per0 2 1 1 0 1 2 0
per1_per1 2 2 0 1 0 1 1
per2_per2 0 1 1 2 0 1 1
snp330_G snp331_G snp332_G snp333_T snp334_A snp335_T snp336_A
per0_per0 0 2 1 2 2 2 0
per1_per1 0 1 0 2 0 1 0
per2_per2 1 1 NA 2 1 1 1
snp337_C snp338_C snp339_A snp340_G snp341_C snp342_T snp343_A
per0_per0 1 0 1 2 0 1 1
per1_per1 1 2 1 1 0 2 2
per2_per2 1 1 0 1 1 0 2
snp344_T snp345_G snp346_C snp347_T snp348_C snp349_C snp350_C
per0_per0 2 0 0 1 1 1 2
per1_per1 1 0 0 2 2 0 0
per2_per2 2 1 1 1 1 1 0
snp351_A snp352_A snp353_T snp354_G snp355_T snp356_T snp357_A
per0_per0 1 2 1 2 1 2 2
per1_per1 1 2 NA 0 2 2 0
per2_per2 0 1 NA 0 2 1 1
snp358_A snp359_A snp360_A snp361_G snp362_A snp363_G snp364_C
per0_per0 1 0 1 1 1 1 1
per1_per1 1 1 0 1 1 0 1
per2_per2 0 0 0 1 2 1 1
snp365_C snp366_A snp367_A snp368_C snp369_G snp370_T snp371_T
per0_per0 0 1 1 0 0 1 1
per1_per1 1 1 2 1 1 1 1
per2_per2 2 0 2 2 1 1 0
snp372_T snp373_G snp374_G snp375_T snp376_A snp377_G snp378_G
per0_per0 0 1 1 1 0 2 1
per1_per1 2 1 1 1 1 1 1
per2_per2 2 0 2 0 1 1 1
snp379_T snp380_A snp381_A snp382_T snp383_C snp384_A snp385_T
per0_per0 1 0 1 0 1 1 0
per1_per1 1 1 1 0 0 0 2
per2_per2 0 0 1 1 1 2 1
snp386_C snp387_A snp388_G snp389_C snp390_T snp391_A snp392_G
per0_per0 1 2 1 1 1 2 1
per1_per1 1 0 0 0 1 1 1
per2_per2 1 1 NA 1 2 1 1
snp393_C snp394_T snp395_G snp396_C snp397_T snp398_C snp399_T
per0_per0 2 0 0 1 2 0 2
per1_per1 0 0 2 1 2 2 2
per2_per2 0 1 1 0 2 0 1
snp400_A snp401_C snp402_T snp403_A snp404_C snp405_A snp406_G
per0_per0 1 2 1 0 1 0 1
per1_per1 1 0 1 2 2 0 2
per2_per2 1 0 0 1 1 1 0
snp407_A snp408_T snp409_G snp410_A snp411_G snp412_G snp413_C
per0_per0 0 2 1 1 1 1 0
per1_per1 1 1 2 2 2 1 2
per2_per2 1 2 1 2 1 1 NA
snp414_T snp415_A snp416_T snp417_A snp418_G snp419_C snp420_A
per0_per0 1 1 1 0 1 0 1
per1_per1 1 1 1 0 2 1 1
per2_per2 1 1 1 0 1 2 2
snp421_C snp422_G snp423_G snp424_C snp425_C snp426_G snp427_T
per0_per0 1 2 2 0 1 1 1
per1_per1 1 2 2 2 0 1 1
per2_per2 2 1 0 1 0 1 0
snp428_G snp429_T snp430_A snp431_A snp432_A snp433_A snp434_G
per0_per0 0 1 1 0 2 2 0
per1_per1 1 1 0 1 1 2 1
per2_per2 2 2 1 2 2 1 2
snp435_A snp436_A snp437_C snp438_T snp439_T snp440_C snp441_A
per0_per0 2 2 1 2 1 1 1
per1_per1 1 1 0 0 0 1 1
per2_per2 1 1 1 1 1 2 0
snp442_C snp443_C snp444_G snp445_T snp446_C snp447_A snp448_A
per0_per0 0 1 1 0 1 2 0
per1_per1 1 1 1 2 1 1 1
per2_per2 0 0 2 1 0 1 0
snp449_T snp450_A snp451_A snp452_A snp453_T snp454_T snp455_A
per0_per0 0 1 0 1 1 2 1
per1_per1 1 0 2 2 1 1 2
per2_per2 1 1 0 0 2 1 1
snp456_A snp457_C snp458_A snp459_A snp460_C snp461_A snp462_T
per0_per0 2 1 2 1 2 0 1
per1_per1 0 2 2 1 1 2 1
per2_per2 2 1 1 1 1 1 0
snp463_G snp464_T snp465_T snp466_A snp467_T snp468_C snp469_T
per0_per0 0 2 0 2 1 2 1
per1_per1 1 2 1 2 0 1 0
per2_per2 0 1 1 1 1 0 1
snp470_C snp471_G snp472_A snp473_C snp474_A snp475_A snp476_T
per0_per0 1 1 1 1 2 1 1
per1_per1 2 0 2 1 1 1 1
per2_per2 0 0 0 0 1 NA 1
snp477_C snp478_G snp479_A snp480_T snp481_G snp482_T snp483_C
per0_per0 1 0 1 1 0 1 1
per1_per1 2 NA 1 1 1 1 1
per2_per2 1 2 1 1 0 0 0
snp484_A snp485_G snp486_G snp487_T snp488_A snp489_C snp490_A
per0_per0 2 1 2 1 2 0 0
per1_per1 1 NA 2 1 0 2 0
per2_per2 1 0 1 0 1 0 1
snp491_A snp492_C snp493_C snp494_T snp495_A snp496_A snp497_A
per0_per0 1 2 0 1 1 1 1
per1_per1 1 2 0 1 1 0 2
per2_per2 1 1 1 2 1 1 0
snp498_T snp499_A snp500_T snp501_G snp502_A snp503_T snp504_G
per0_per0 1 2 1 0 0 1 1
per1_per1 2 1 1 1 0 2 0
per2_per2 0 0 1 0 2 2 1
snp505_T snp506_C snp507_C snp508_A snp509_C snp510_A snp511_A
per0_per0 0 0 1 1 1 1 1
per1_per1 0 1 2 1 1 2 0
per2_per2 0 1 1 1 2 1 1
snp512_G snp513_C snp514_C snp515_G snp516_A snp517_C snp518_G
per0_per0 0 2 1 1 2 2 2
per1_per1 1 1 1 1 1 1 1
per2_per2 1 1 0 1 NA 2 1
snp519_C snp520_C snp521_A snp522_A snp523_T snp524_A snp525_C
per0_per0 2 1 1 2 1 1 1
per1_per1 2 0 1 0 1 1 2
per2_per2 1 1 1 1 0 1 1
snp526_G snp527_A snp528_T snp529_C snp530_T snp531_C snp532_A
per0_per0 1 2 1 2 0 0 1
per1_per1 1 1 2 1 1 1 2
per2_per2 1 2 1 2 0 1 1
snp533_A snp534_C snp535_A snp536_A snp537_C snp538_T snp539_G
per0_per0 0 2 1 0 1 1 0
per1_per1 2 1 1 1 2 1 1
per2_per2 2 1 1 1 1 0 2
snp540_C snp541_G snp542_A snp543_G snp544_T snp545_C snp546_T
per0_per0 1 1 2 2 0 2 2
per1_per1 1 2 2 1 0 1 2
per2_per2 0 1 1 1 1 2 0
snp547_C snp548_C snp549_G snp550_A snp551_C snp552_A snp553_A
per0_per0 1 0 1 1 0 1 1
per1_per1 0 1 1 0 1 1 0
per2_per2 1 2 0 0 1 0 1
snp554_C snp555_G snp556_G snp557_C snp558_G snp559_G snp560_T
per0_per0 2 0 1 1 0 1 2
per1_per1 1 0 0 1 0 1 1
per2_per2 2 2 2 0 1 0 0
snp561_C snp562_T snp563_T snp564_G snp565_C snp566_T snp567_C
per0_per0 2 2 2 0 0 0 1
per1_per1 0 1 1 1 0 1 0
per2_per2 0 1 2 1 0 0 0
snp568_T snp569_T snp570_C snp571_A snp572_A snp573_A snp574_T
per0_per0 0 1 1 1 0 2 1
per1_per1 0 2 2 0 1 0 1
per2_per2 2 1 2 0 1 0 0
snp575_T snp576_G snp577_A snp578_T snp579_G snp580_C snp581_C
per0_per0 1 0 2 1 1 0 2
per1_per1 1 1 1 0 1 0 0
per2_per2 0 0 1 0 1 1 0
snp582_T snp583_G snp584_A snp585_G snp586_G snp587_G snp588_C
per0_per0 0 1 1 0 2 2 2
per1_per1 1 0 1 1 1 1 1
per2_per2 2 1 1 0 1 0 1
snp589_C snp590_G snp591_C snp592_G snp593_G snp594_G snp595_A
per0_per0 2 0 1 1 0 0 NA
per1_per1 2 2 1 1 1 2 1
per2_per2 2 0 0 1 0 0 2
snp596_A snp597_T snp598_T snp599_C snp600_A snp601_A snp602_A
per0_per0 1 1 0 2 1 0 NA
per1_per1 1 2 0 0 1 1 2
per2_per2 1 1 2 1 0 1 0
snp603_A snp604_G snp605_A snp606_G snp607_C snp608_C snp609_T
per0_per0 1 0 0 1 1 0 2
per1_per1 1 0 1 1 2 1 2
per2_per2 2 1 0 1 1 NA 0
snp610_C snp611_C snp612_G snp613_A snp614_T snp615_A snp616_C
per0_per0 0 0 1 1 0 1 1
per1_per1 2 1 1 0 1 1 0
per2_per2 1 1 0 2 0 1 2
snp617_G snp618_C snp619_G snp620_C snp621_C snp622_C snp623_C
per0_per0 1 0 2 1 0 0 0
per1_per1 1 2 1 2 0 1 0
per2_per2 2 2 1 2 0 1 1
snp624_A snp625_T snp626_T snp627_A snp628_T snp629_A snp630_C
per0_per0 1 0 1 1 0 NA 0
per1_per1 1 0 1 1 1 1 1
per2_per2 1 1 0 1 0 1 0
snp631_G snp632_T snp633_C snp634_A snp635_G snp636_G snp637_A
per0_per0 1 1 1 0 0 1 1
per1_per1 1 2 2 1 0 1 NA
per2_per2 2 1 1 1 0 NA 0
snp638_A snp639_G snp640_T snp641_T snp642_T snp643_G snp644_C
per0_per0 1 0 2 2 1 2 2
per1_per1 1 1 1 0 1 1 1
per2_per2 1 2 0 2 1 2 0
snp645_G snp646_A snp647_T snp648_G snp649_G snp650_G snp651_A
per0_per0 1 0 0 1 0 1 1
per1_per1 1 2 0 0 1 1 2
per2_per2 2 1 1 1 1 1 0
snp652_C snp653_C snp654_T snp655_T snp656_A snp657_G snp658_C
per0_per0 2 1 1 0 2 2 2
per1_per1 1 2 1 1 1 2 2
per2_per2 0 0 1 1 2 1 0
snp659_T snp660_C snp661_T snp662_T snp663_A snp664_A snp665_G
per0_per0 1 1 1 0 1 1 2
per1_per1 1 0 0 1 1 NA 1
per2_per2 2 0 1 0 1 1 1
snp666_G snp667_C snp668_T snp669_C snp670_C snp671_G snp672_C
per0_per0 0 0 1 1 0 2 0
per1_per1 2 2 1 0 1 1 1
per2_per2 0 1 2 1 1 2 0
snp673_A snp674_T snp675_C snp676_G snp677_C snp678_T snp679_T
per0_per0 1 1 1 0 1 0 1
per1_per1 0 1 1 0 0 1 1
per2_per2 1 1 1 1 0 1 1
snp680_T snp681_T snp682_G snp683_C snp684_A snp685_A snp686_G
per0_per0 2 0 2 1 1 0 1
per1_per1 1 2 1 1 0 1 0
per2_per2 1 1 1 2 1 1 2
snp687_A snp688_C snp689_C snp690_G snp691_G snp692_G snp693_G
per0_per0 1 0 NA 0 1 0 0
per1_per1 0 0 2 0 1 2 1
per2_per2 1 1 0 0 1 0 1
snp694_G snp695_G snp696_T snp697_C snp698_C snp699_G snp700_T
per0_per0 1 2 1 0 2 0 1
per1_per1 2 1 2 1 2 1 0
per2_per2 0 2 2 1 0 2 NA
snp701_C snp702_T snp703_T snp704_T snp705_T snp706_G snp707_G
per0_per0 0 0 0 1 1 NA 1
per1_per1 2 1 2 1 0 1 1
per2_per2 0 0 1 0 0 0 0
snp708_A snp709_T snp710_T snp711_C snp712_T snp713_A snp714_G
per0_per0 0 0 0 1 0 2 0
per1_per1 0 1 0 NA 1 2 1
per2_per2 0 1 1 2 NA 0 0
snp715_T snp716_A snp717_C snp718_G snp719_G snp720_A snp721_G
per0_per0 1 1 2 1 0 NA 1
per1_per1 2 1 2 0 1 1 0
per2_per2 1 1 1 2 1 1 0
snp722_G snp723_A snp724_C snp725_G snp726_A snp727_A snp728_G
per0_per0 1 1 1 0 0 0 0
per1_per1 2 1 2 1 1 1 1
per2_per2 1 1 1 1 1 0 1
snp729_T snp730_G snp731_A snp732_G snp733_T snp734_A snp735_G
per0_per0 2 0 0 1 1 0 0
per1_per1 2 2 1 1 2 0 2
per2_per2 2 1 2 1 1 2 1
snp736_G snp737_G snp738_T snp739_C snp740_A snp741_A snp742_G
per0_per0 1 0 1 2 1 0 0
per1_per1 0 0 2 0 1 0 1
per2_per2 NA 1 1 2 0 2 0
snp743_C snp744_C snp745_T snp746_C snp747_G snp748_A snp749_A
per0_per0 1 2 2 2 2 1 0
per1_per1 1 1 1 1 2 1 1
per2_per2 2 0 1 1 1 NA 2
snp750_C snp751_C snp752_A snp753_G snp754_G snp755_A snp756_T
per0_per0 0 0 1 1 1 0 1
per1_per1 2 1 1 1 0 0 1
per2_per2 1 0 2 1 1 1 0
snp757_C snp758_C snp759_T snp760_C snp761_T snp762_C snp763_T
per0_per0 0 2 0 0 2 1 2
per1_per1 0 0 0 1 0 1 2
per2_per2 2 0 2 0 2 0 1
snp764_G snp765_A snp766_C snp767_C snp768_C snp769_C snp770_C
per0_per0 0 2 1 1 0 0 2
per1_per1 NA 0 0 1 1 0 0
per2_per2 2 0 2 0 0 2 NA
snp771_T snp772_T snp773_G snp774_A snp775_C snp776_C snp777_A
per0_per0 1 0 1 0 2 0 0
per1_per1 1 0 1 0 2 0 0
per2_per2 1 0 0 2 1 1 1
snp778_G snp779_T snp780_C snp781_T snp782_G snp783_C snp784_A
per0_per0 0 2 1 2 1 1 2
per1_per1 1 1 1 1 1 0 0
per2_per2 2 1 1 1 0 1 0
snp785_T snp786_G snp787_G snp788_C snp789_G snp790_G snp791_C
per0_per0 1 0 0 0 1 NA 2
per1_per1 1 0 2 1 1 1 0
per2_per2 0 0 0 1 1 2 2
snp792_T snp793_T snp794_C snp795_A snp796_T snp797_C snp798_T
per0_per0 0 2 1 2 1 0 1
per1_per1 0 1 1 1 2 1 1
per2_per2 0 1 0 0 1 1 1
snp799_T snp800_T snp801_A snp802_G snp803_T snp804_T snp805_G
per0_per0 0 1 1 1 1 1 0
per1_per1 1 1 1 0 1 0 2
per2_per2 1 1 1 0 2 1 0
snp806_G snp807_A snp808_G snp809_T snp810_G snp811_A snp812_C
per0_per0 2 1 1 0 1 0 2
per1_per1 2 2 1 1 2 1 0
per2_per2 1 0 2 1 1 1 2
snp813_T snp814_T snp815_G snp816_A snp817_T snp818_G snp819_A
per0_per0 1 1 1 1 0 1 0
per1_per1 2 2 1 0 1 1 2
per2_per2 0 0 2 1 0 1 0
snp820_C snp821_A snp822_T snp823_G snp824_C snp825_T snp826_A
per0_per0 0 1 2 1 0 0 0
per1_per1 2 1 0 1 2 1 0
per2_per2 0 1 1 0 0 1 1
snp827_A snp828_G snp829_T snp830_T snp831_C snp832_A snp833_C
per0_per0 1 1 0 0 0 2 1
per1_per1 0 0 1 1 0 0 0
per2_per2 1 1 0 0 0 2 1
snp834_A snp835_G snp836_G snp837_A snp838_T snp839_T snp840_C
per0_per0 1 1 1 1 1 2 0
per1_per1 1 2 1 0 1 0 0
per2_per2 0 1 2 1 1 1 1
snp841_C snp842_A snp843_T snp844_G snp845_C snp846_A snp847_G
per0_per0 1 0 0 1 1 1 NA
per1_per1 2 1 2 0 0 1 1
per2_per2 0 0 0 1 1 0 1
snp848_G snp849_A snp850_G snp851_G snp852_G snp853_A snp854_A
per0_per0 1 1 1 0 1 0 0
per1_per1 0 1 1 0 1 0 0
per2_per2 0 2 2 2 1 1 0
snp855_C snp856_A snp857_T snp858_G snp859_A snp860_G snp861_T
per0_per0 2 1 0 0 1 1 0
per1_per1 1 2 2 1 1 NA 1
per2_per2 1 1 1 0 1 2 0
snp862_T snp863_C snp864_G snp865_A snp866_G snp867_C snp868_T
per0_per0 0 1 1 1 1 1 1
per1_per1 2 2 1 0 2 2 2
per2_per2 1 1 2 0 1 0 1
snp869_A snp870_A snp871_C snp872_A snp873_T snp874_T snp875_C
per0_per0 1 1 1 0 2 2 0
per1_per1 0 1 0 2 1 1 NA
per2_per2 2 0 2 1 1 2 0
snp876_T snp877_G snp878_C snp879_G snp880_G snp881_C snp882_T
per0_per0 1 0 0 0 1 1 1
per1_per1 1 1 1 1 1 0 0
per2_per2 1 2 2 2 0 1 0
snp883_C snp884_G snp885_G snp886_G snp887_C snp888_C snp889_T
per0_per0 0 1 1 1 1 1 2
per1_per1 1 2 2 0 0 0 1
per2_per2 0 1 1 1 1 NA 0
snp890_A snp891_T snp892_G snp893_T snp894_A snp895_C snp896_G
per0_per0 1 0 0 1 0 1 0
per1_per1 0 1 2 1 1 1 0
per2_per2 1 0 0 1 1 0 1
snp897_G snp898_T snp899_A snp900_C snp901_T snp902_G snp903_T
per0_per0 0 1 2 1 0 0 1
per1_per1 0 1 1 1 1 1 0
per2_per2 1 1 1 1 2 0 2
snp904_T snp905_C snp906_A snp907_C snp908_T snp909_T snp910_A
per0_per0 1 0 2 1 2 NA 1
per1_per1 2 1 2 2 1 1 NA
per2_per2 2 1 0 1 2 0 2
snp911_T snp912_G snp913_T snp914_T snp915_A snp916_T snp917_C
per0_per0 1 2 2 0 1 0 1
per1_per1 0 2 1 1 1 1 0
per2_per2 0 0 1 2 1 1 2
snp918_G snp919_C snp920_G snp921_T snp922_G snp923_A snp924_C
per0_per0 0 1 1 0 0 1 1
per1_per1 2 0 2 2 2 1 1
per2_per2 1 1 1 2 0 1 0
snp925_A snp926_T snp927_C snp928_G snp929_G snp930_A snp931_C
per0_per0 1 NA 1 2 2 0 1
per1_per1 0 1 0 0 0 1 1
per2_per2 0 1 2 1 0 1 2
snp932_T snp933_G snp934_G snp935_C snp936_A snp937_T snp938_G
per0_per0 2 2 1 2 2 1 1
per1_per1 0 2 0 0 1 1 1
per2_per2 2 0 1 1 1 1 1
snp939_C snp940_C snp941_T snp942_G snp943_G snp944_T snp945_T
per0_per0 0 1 1 2 1 1 2
per1_per1 0 0 1 2 1 2 1
per2_per2 1 1 1 1 2 1 1
snp946_A snp947_A snp948_A snp949_A snp950_C snp951_T snp952_G
per0_per0 1 0 1 2 0 1 1
per1_per1 1 1 1 1 0 1 1
per2_per2 1 2 1 0 1 0 2
snp953_G snp954_G snp955_A snp956_T snp957_T snp958_T snp959_G
per0_per0 2 1 1 1 1 2 0
per1_per1 1 1 0 0 2 1 1
per2_per2 0 1 0 1 0 0 1
snp960_T snp961_A snp962_C snp963_T snp964_A snp965_G snp966_A
per0_per0 0 1 2 2 0 1 0
per1_per1 2 1 2 1 1 0 1
per2_per2 1 2 1 0 1 1 2
snp967_C snp968_T snp969_A snp970_G snp971_C snp972_G snp973_A
per0_per0 0 0 1 1 1 0 2
per1_per1 1 2 1 1 0 1 0
per2_per2 2 1 0 1 0 1 0
snp974_A snp975_G snp976_T snp977_T snp978_A snp979_A snp980_A
per0_per0 1 1 1 0 1 0 0
per1_per1 1 1 0 1 1 1 1
per2_per2 0 2 0 1 1 1 0
snp981_T snp982_T snp983_C snp984_G snp985_C snp986_C snp987_C
per0_per0 1 1 1 2 0 1 1
per1_per1 0 1 1 1 0 0 0
per2_per2 2 2 0 1 2 1 2
snp988_C snp989_T snp990_G snp991_A snp992_T snp993_C snp994_T
per0_per0 1 2 1 1 0 2 1
per1_per1 1 1 0 1 1 1 1
per2_per2 0 1 1 1 2 1 0
snp995_T snp996_G snp997_T snp998_C snp999_G
per0_per0 1 1 0 1 NA
per1_per1 1 1 1 0 1
per2_per2 1 0 2 0 2
snp0_A snp1_C snp2_G snp3_G snp4_G snp5_T snp6_G snp7_A
0 1 1 1 0 2 1 0
snp8_A snp9_C snp10_A snp11_C snp12_A snp13_T snp14_A snp15_G
0 1 1 1 1 1 0 1
snp16_A snp17_T snp18_C snp19_G snp20_C snp21_G snp22_G snp23_C
1 1 0 1 1 2 0 NA
snp24_T snp25_A snp26_G snp27_G snp28_T snp29_T snp30_T snp31_A
0 1 1 1 2 1 1 1
snp32_T snp33_C snp34_T snp35_A snp36_G snp37_G snp38_T snp39_C
0 0 1 1 1 2 0 0
snp40_A snp41_C snp42_T snp43_T snp44_T snp45_C snp46_C snp47_A
2 1 0 0 1 0 0 NA
snp48_C snp49_C snp50_T snp51_T snp52_A snp53_C snp54_T snp55_C
2 2 1 0 1 1 2 2
snp56_C snp57_A snp58_A snp59_G snp60_A snp61_A snp62_G snp63_G
1 1 1 1 2 2 1 2
snp64_T snp65_G snp66_C snp67_G snp68_A snp69_A snp70_C snp71_G
0 1 1 1 0 1 2 2
snp72_A snp73_C snp74_G snp75_T snp76_C snp77_C snp78_C snp79_A
2 0 1 1 1 2 1 2
snp80_C snp81_A snp82_T snp83_G snp84_T snp85_T snp86_G snp87_A
2 1 0 1 0 1 1 2
snp88_G snp89_G snp90_C snp91_G snp92_T snp93_T snp94_T snp95_A
2 1 2 1 0 0 0 1
snp96_C snp97_G snp98_A snp99_T snp100_T snp101_T snp102_T snp103_G
0 2 2 2 2 0 NA 0
snp104_T snp105_C snp106_T snp107_T snp108_T snp109_A snp110_A snp111_A
1 1 1 1 0 0 0 1
snp112_G snp113_G snp114_T snp115_T snp116_T snp117_T snp118_C snp119_T
0 0 0 2 1 0 1 1
snp120_C snp121_T snp122_C snp123_A snp124_T snp125_C snp126_C snp127_A
0 1 0 1 NA NA 1 1
snp128_A snp129_T snp130_T snp131_G snp132_A snp133_T snp134_A snp135_G
1 0 0 1 0 1 0 2
snp136_A snp137_G snp138_A snp139_G snp140_T snp141_A snp142_T snp143_G
1 0 1 1 0 1 0 1
snp144_A snp145_C snp146_C snp147_T snp148_G snp149_A snp150_C snp151_C
1 0 1 1 0 1 1 2
snp152_C snp153_G snp154_A snp155_A snp156_A snp157_A snp158_T snp159_G
1 2 2 0 0 2 2 0
snp160_C snp161_A snp162_T snp163_A snp164_T snp165_G snp166_T snp167_T
1 1 2 1 0 0 2 2
snp168_C snp169_C snp170_A snp171_C snp172_G snp173_A snp174_A snp175_C
0 1 1 2 1 0 0 1
snp176_T snp177_C snp178_A snp179_G snp180_A snp181_C snp182_A snp183_G
1 0 0 2 0 0 1 1
snp184_T snp185_T snp186_T snp187_A snp188_G snp189_A snp190_C snp191_C
1 2 1 0 2 2 1 1
snp192_C snp193_T snp194_A snp195_C snp196_T snp197_T snp198_A snp199_T
1 1 1 1 0 0 1 0
snp200_C snp201_C snp202_C snp203_G snp204_G snp205_A snp206_T snp207_G
2 1 1 0 1 1 NA 2
snp208_G snp209_A snp210_A snp211_G snp212_T snp213_C snp214_A snp215_C
1 0 1 1 0 0 1 1
snp216_G snp217_A snp218_G snp219_G snp220_G snp221_G snp222_A snp223_C
2 0 0 1 0 1 1 1
snp224_T snp225_G snp226_C snp227_T snp228_T snp229_A snp230_G snp231_T
1 1 1 1 1 1 2 2
snp232_A snp233_A snp234_G snp235_A snp236_A snp237_C snp238_A snp239_T
0 0 2 1 0 1 0 1
snp240_C snp241_T snp242_T snp243_A snp244_C snp245_G snp246_A snp247_T
1 2 1 0 2 2 1 0
snp248_C snp249_T snp250_T snp251_C snp252_G snp253_A snp254_C snp255_A
2 0 2 1 0 1 2 0
snp256_T snp257_G snp258_A snp259_G snp260_C snp261_A snp262_A snp263_T
1 1 1 1 1 1 1 1
snp264_T snp265_T snp266_A snp267_G snp268_G snp269_T snp270_T snp271_G
1 2 0 0 1 1 2 0
snp272_T snp273_T snp274_A snp275_G snp276_A snp277_T snp278_T snp279_G
0 0 1 1 1 1 1 0
snp280_G snp281_T snp282_A snp283_A snp284_C snp285_T snp286_T snp287_G
0 0 0 2 1 1 1 1
snp288_T snp289_A snp290_T snp291_T snp292_T snp293_G snp294_G snp295_C
1 1 2 1 0 2 1 1
snp296_T snp297_A snp298_C snp299_C snp300_C snp301_T snp302_A snp303_G
0 1 1 1 1 NA 1 0
snp304_C snp305_G snp306_C snp307_T snp308_C snp309_A snp310_C snp311_G
2 0 1 0 1 1 2 0
snp312_T snp313_T snp314_C snp315_A snp316_C snp317_T snp318_T snp319_C
1 1 1 2 0 1 1 1
snp320_C snp321_C snp322_T snp323_A snp324_C snp325_A snp326_A snp327_A
1 0 1 2 1 1 0 1
snp328_C snp329_G snp330_G snp331_G snp332_G snp333_T snp334_A snp335_T
2 0 0 2 1 2 2 2
snp336_A snp337_C snp338_C snp339_A snp340_G snp341_C snp342_T snp343_A
0 1 0 1 2 0 1 1
snp344_T snp345_G snp346_C snp347_T snp348_C snp349_C snp350_C snp351_A
2 0 0 1 1 1 2 1
snp352_A snp353_T snp354_G snp355_T snp356_T snp357_A snp358_A snp359_A
2 1 2 1 2 2 1 0
snp360_A snp361_G snp362_A snp363_G snp364_C snp365_C snp366_A snp367_A
1 1 1 1 1 0 1 1
snp368_C snp369_G snp370_T snp371_T snp372_T snp373_G snp374_G snp375_T
0 0 1 1 0 1 1 1
snp376_A snp377_G snp378_G snp379_T snp380_A snp381_A snp382_T snp383_C
0 2 1 1 0 1 0 1
snp384_A snp385_T snp386_C snp387_A snp388_G snp389_C snp390_T snp391_A
1 0 1 2 1 1 1 2
snp392_G snp393_C snp394_T snp395_G snp396_C snp397_T snp398_C snp399_T
1 2 0 0 1 2 0 2
snp400_A snp401_C snp402_T snp403_A snp404_C snp405_A snp406_G snp407_A
1 2 1 0 1 0 1 0
snp408_T snp409_G snp410_A snp411_G snp412_G snp413_C snp414_T snp415_A
2 1 1 1 1 0 1 1
snp416_T snp417_A snp418_G snp419_C snp420_A snp421_C snp422_G snp423_G
1 0 1 0 1 1 2 2
snp424_C snp425_C snp426_G snp427_T snp428_G snp429_T snp430_A snp431_A
0 1 1 1 0 1 1 0
snp432_A snp433_A snp434_G snp435_A snp436_A snp437_C snp438_T snp439_T
2 2 0 2 2 1 2 1
snp440_C snp441_A snp442_C snp443_C snp444_G snp445_T snp446_C snp447_A
1 1 0 1 1 0 1 2
snp448_A snp449_T snp450_A snp451_A snp452_A snp453_T snp454_T snp455_A
0 0 1 0 1 1 2 1
snp456_A snp457_C snp458_A snp459_A snp460_C snp461_A snp462_T snp463_G
2 1 2 1 2 0 1 0
snp464_T snp465_T snp466_A snp467_T snp468_C snp469_T snp470_C snp471_G
2 0 2 1 2 1 1 1
snp472_A snp473_C snp474_A snp475_A snp476_T snp477_C snp478_G snp479_A
1 1 2 1 1 1 0 1
snp480_T snp481_G snp482_T snp483_C snp484_A snp485_G snp486_G snp487_T
1 0 1 1 2 1 2 1
snp488_A snp489_C snp490_A snp491_A snp492_C snp493_C snp494_T snp495_A
2 0 0 1 2 0 1 1
snp496_A snp497_A snp498_T snp499_A snp500_T snp501_G snp502_A snp503_T
1 1 1 2 1 0 0 1
snp504_G snp505_T snp506_C snp507_C snp508_A snp509_C snp510_A snp511_A
1 0 0 1 1 1 1 1
snp512_G snp513_C snp514_C snp515_G snp516_A snp517_C snp518_G snp519_C
0 2 1 1 2 2 2 2
snp520_C snp521_A snp522_A snp523_T snp524_A snp525_C snp526_G snp527_A
1 1 2 1 1 1 1 2
snp528_T snp529_C snp530_T snp531_C snp532_A snp533_A snp534_C snp535_A
1 2 0 0 1 0 2 1
snp536_A snp537_C snp538_T snp539_G snp540_C snp541_G snp542_A snp543_G
0 1 1 0 1 1 2 2
snp544_T snp545_C snp546_T snp547_C snp548_C snp549_G snp550_A snp551_C
0 2 2 1 0 1 1 0
snp552_A snp553_A snp554_C snp555_G snp556_G snp557_C snp558_G snp559_G
1 1 2 0 1 1 0 1
snp560_T snp561_C snp562_T snp563_T snp564_G snp565_C snp566_T snp567_C
2 2 2 2 0 0 0 1
snp568_T snp569_T snp570_C snp571_A snp572_A snp573_A snp574_T snp575_T
0 1 1 1 0 2 1 1
snp576_G snp577_A snp578_T snp579_G snp580_C snp581_C snp582_T snp583_G
0 2 1 1 0 2 0 1
snp584_A snp585_G snp586_G snp587_G snp588_C snp589_C snp590_G snp591_C
1 0 2 2 2 2 0 1
snp592_G snp593_G snp594_G snp595_A snp596_A snp597_T snp598_T snp599_C
1 0 0 NA 1 1 0 2
snp600_A snp601_A snp602_A snp603_A snp604_G snp605_A snp606_G snp607_C
1 0 NA 1 0 0 1 1
snp608_C snp609_T snp610_C snp611_C snp612_G snp613_A snp614_T snp615_A
0 2 0 0 1 1 0 1
snp616_C snp617_G snp618_C snp619_G snp620_C snp621_C snp622_C snp623_C
1 1 0 2 1 0 0 0
snp624_A snp625_T snp626_T snp627_A snp628_T snp629_A snp630_C snp631_G
1 0 1 1 0 NA 0 1
snp632_T snp633_C snp634_A snp635_G snp636_G snp637_A snp638_A snp639_G
1 1 0 0 1 1 1 0
snp640_T snp641_T snp642_T snp643_G snp644_C snp645_G snp646_A snp647_T
2 2 1 2 2 1 0 0
snp648_G snp649_G snp650_G snp651_A snp652_C snp653_C snp654_T snp655_T
1 0 1 1 2 1 1 0
snp656_A snp657_G snp658_C snp659_T snp660_C snp661_T snp662_T snp663_A
2 2 2 1 1 1 0 1
snp664_A snp665_G snp666_G snp667_C snp668_T snp669_C snp670_C snp671_G
1 2 0 0 1 1 0 2
snp672_C snp673_A snp674_T snp675_C snp676_G snp677_C snp678_T snp679_T
0 1 1 1 0 1 0 1
snp680_T snp681_T snp682_G snp683_C snp684_A snp685_A snp686_G snp687_A
2 0 2 1 1 0 1 1
snp688_C snp689_C snp690_G snp691_G snp692_G snp693_G snp694_G snp695_G
0 NA 0 1 0 0 1 2
snp696_T snp697_C snp698_C snp699_G snp700_T snp701_C snp702_T snp703_T
1 0 2 0 1 0 0 0
snp704_T snp705_T snp706_G snp707_G snp708_A snp709_T snp710_T snp711_C
1 1 NA 1 0 0 0 1
snp712_T snp713_A snp714_G snp715_T snp716_A snp717_C snp718_G snp719_G
0 2 0 1 1 2 1 0
snp720_A snp721_G snp722_G snp723_A snp724_C snp725_G snp726_A snp727_A
NA 1 1 1 1 0 0 0
snp728_G snp729_T snp730_G snp731_A snp732_G snp733_T snp734_A snp735_G
0 2 0 0 1 1 0 0
snp736_G snp737_G snp738_T snp739_C snp740_A snp741_A snp742_G snp743_C
1 0 1 2 1 0 0 1
snp744_C snp745_T snp746_C snp747_G snp748_A snp749_A snp750_C snp751_C
2 2 2 2 1 0 0 0
snp752_A snp753_G snp754_G snp755_A snp756_T snp757_C snp758_C snp759_T
1 1 1 0 1 0 2 0
snp760_C snp761_T snp762_C snp763_T snp764_G snp765_A snp766_C snp767_C
0 2 1 2 0 2 1 1
snp768_C snp769_C snp770_C snp771_T snp772_T snp773_G snp774_A snp775_C
0 0 2 1 0 1 0 2
snp776_C snp777_A snp778_G snp779_T snp780_C snp781_T snp782_G snp783_C
0 0 0 2 1 2 1 1
snp784_A snp785_T snp786_G snp787_G snp788_C snp789_G snp790_G snp791_C
2 1 0 0 0 1 NA 2
snp792_T snp793_T snp794_C snp795_A snp796_T snp797_C snp798_T snp799_T
0 2 1 2 1 0 1 0
snp800_T snp801_A snp802_G snp803_T snp804_T snp805_G snp806_G snp807_A
1 1 1 1 1 0 2 1
snp808_G snp809_T snp810_G snp811_A snp812_C snp813_T snp814_T snp815_G
1 0 1 0 2 1 1 1
snp816_A snp817_T snp818_G snp819_A snp820_C snp821_A snp822_T snp823_G
1 0 1 0 0 1 2 1
snp824_C snp825_T snp826_A snp827_A snp828_G snp829_T snp830_T snp831_C
0 0 0 1 1 0 0 0
snp832_A snp833_C snp834_A snp835_G snp836_G snp837_A snp838_T snp839_T
2 1 1 1 1 1 1 2
snp840_C snp841_C snp842_A snp843_T snp844_G snp845_C snp846_A snp847_G
0 1 0 0 1 1 1 NA
snp848_G snp849_A snp850_G snp851_G snp852_G snp853_A snp854_A snp855_C
1 1 1 0 1 0 0 2
snp856_A snp857_T snp858_G snp859_A snp860_G snp861_T snp862_T snp863_C
1 0 0 1 1 0 0 1
snp864_G snp865_A snp866_G snp867_C snp868_T snp869_A snp870_A snp871_C
1 1 1 1 1 1 1 1
snp872_A snp873_T snp874_T snp875_C snp876_T snp877_G snp878_C snp879_G
0 2 2 0 1 0 0 0
snp880_G snp881_C snp882_T snp883_C snp884_G snp885_G snp886_G snp887_C
1 1 1 0 1 1 1 1
snp888_C snp889_T snp890_A snp891_T snp892_G snp893_T snp894_A snp895_C
1 2 1 0 0 1 0 1
snp896_G snp897_G snp898_T snp899_A snp900_C snp901_T snp902_G snp903_T
0 0 1 2 1 0 0 1
snp904_T snp905_C snp906_A snp907_C snp908_T snp909_T snp910_A snp911_T
1 0 2 1 2 NA 1 1
snp912_G snp913_T snp914_T snp915_A snp916_T snp917_C snp918_G snp919_C
2 2 0 1 0 1 0 1
snp920_G snp921_T snp922_G snp923_A snp924_C snp925_A snp926_T snp927_C
1 0 0 1 1 1 NA 1
snp928_G snp929_G snp930_A snp931_C snp932_T snp933_G snp934_G snp935_C
2 2 0 1 2 2 1 2
snp936_A snp937_T snp938_G snp939_C snp940_C snp941_T snp942_G snp943_G
2 1 1 0 1 1 2 1
snp944_T snp945_T snp946_A snp947_A snp948_A snp949_A snp950_C snp951_T
1 2 1 0 1 2 0 1
snp952_G snp953_G snp954_G snp955_A snp956_T snp957_T snp958_T snp959_G
1 2 1 1 1 1 2 0
snp960_T snp961_A snp962_C snp963_T snp964_A snp965_G snp966_A snp967_C
0 1 2 2 0 1 0 0
snp968_T snp969_A snp970_G snp971_C snp972_G snp973_A snp974_A snp975_G
0 1 1 1 0 2 1 1
snp976_T snp977_T snp978_A snp979_A snp980_A snp981_T snp982_T snp983_C
1 0 1 0 0 1 1 1
snp984_G snp985_C snp986_C snp987_C snp988_C snp989_T snp990_G snp991_A
2 0 1 1 1 2 1 1
snp992_T snp993_C snp994_T snp995_T snp996_G snp997_T snp998_C snp999_G
0 2 1 1 1 0 1 NA
snp0_A snp1_C snp2_G snp3_G snp4_G snp5_T snp6_G snp7_A snp8_A snp9_C
per0_per0 0 1 1 1 0 2 1 0 0 1
per1_per1 1 1 1 1 NA 2 2 2 1 1
per2_per2 1 0 0 2 0 0 1 2 0 1
snp10_A snp11_C snp12_A snp13_T snp14_A snp15_G snp16_A snp17_T
per0_per0 1 1 1 1 0 1 1 1
per1_per1 2 1 1 1 2 0 0 1
per2_per2 2 2 1 2 0 1 0 1
snp18_C snp19_G snp20_C snp21_G snp22_G snp23_C snp24_T snp25_A
per0_per0 0 1 1 2 0 NA 0 1
per1_per1 1 0 0 2 1 0 1 2
per2_per2 1 2 2 1 NA 0 1 2
snp26_G snp27_G snp28_T snp29_T snp30_T snp31_A snp32_T snp33_C
per0_per0 1 1 2 1 1 1 0 0
per1_per1 2 0 1 0 1 0 0 0
per2_per2 2 2 2 2 0 0 2 0
snp34_T snp35_A snp36_G snp37_G snp38_T snp39_C snp40_A snp41_C
per0_per0 1 1 1 2 0 0 2 1
per1_per1 1 1 0 1 2 1 1 0
per2_per2 0 1 1 1 1 2 0 1
snp42_T snp43_T snp44_T snp45_C snp46_C snp47_A snp48_C snp49_C
per0_per0 0 0 1 0 0 NA 2 2
per1_per1 1 1 1 0 2 1 1 1
per2_per2 1 2 0 1 1 1 0 0
snp50_T snp51_T snp52_A snp53_C snp54_T snp55_C snp56_C snp57_A
per0_per0 1 0 1 1 2 2 1 1
per1_per1 2 1 2 0 2 0 1 2
per2_per2 1 0 2 1 1 1 0 1
snp58_A snp59_G snp60_A snp61_A snp62_G snp63_G snp64_T snp65_G
per0_per0 1 1 2 2 1 2 0 1
per1_per1 0 0 2 1 0 1 2 1
per2_per2 1 1 0 2 1 1 0 1
snp66_C snp67_G snp68_A snp69_A snp70_C snp71_G snp72_A snp73_C
per0_per0 1 1 0 1 2 2 2 0
per1_per1 1 1 1 1 1 1 1 1
per2_per2 0 1 1 2 1 2 NA 0
snp74_G snp75_T snp76_C snp77_C snp78_C snp79_A snp80_C snp81_A
per0_per0 1 1 1 2 1 2 2 1
per1_per1 2 0 1 2 1 2 2 1
per2_per2 1 1 1 2 0 0 1 0
snp82_T snp83_G snp84_T snp85_T snp86_G snp87_A snp88_G snp89_G
per0_per0 0 1 0 1 1 2 2 1
per1_per1 1 1 0 1 1 0 2 1
per2_per2 0 2 2 0 0 0 2 1
snp90_C snp91_G snp92_T snp93_T snp94_T snp95_A snp96_C snp97_G
per0_per0 2 1 0 0 0 1 0 2
per1_per1 2 1 2 1 1 1 0 1
per2_per2 1 1 0 1 1 1 1 1
snp98_A snp99_T snp100_T snp101_T snp102_T snp103_G snp104_T snp105_C
per0_per0 2 2 2 0 NA 0 1 1
per1_per1 NA 1 2 0 1 1 2 0
per2_per2 0 1 1 2 2 2 1 2
snp106_T snp107_T snp108_T snp109_A snp110_A snp111_A snp112_G
per0_per0 1 1 0 0 0 1 0
per1_per1 1 1 1 1 1 2 1
per2_per2 2 0 1 0 1 0 1
snp113_G snp114_T snp115_T snp116_T snp117_T snp118_C snp119_T
per0_per0 0 0 2 1 0 1 1
per1_per1 0 1 1 0 0 0 0
per2_per2 1 2 2 0 1 1 1
snp120_C snp121_T snp122_C snp123_A snp124_T snp125_C snp126_C
per0_per0 0 1 0 1 NA NA 1
per1_per1 1 2 2 1 1 1 1
per2_per2 0 0 0 1 0 1 0
snp127_A snp128_A snp129_T snp130_T snp131_G snp132_A snp133_T
per0_per0 1 1 0 0 1 0 1
per1_per1 0 1 1 1 0 0 2
per2_per2 0 1 1 1 1 1 0
snp134_A snp135_G snp136_A snp137_G snp138_A snp139_G snp140_T
per0_per0 0 2 1 0 1 1 0
per1_per1 0 1 1 1 0 1 1
per2_per2 1 0 2 1 2 1 2
snp141_A snp142_T snp143_G snp144_A snp145_C snp146_C snp147_T
per0_per0 1 0 1 1 0 1 1
per1_per1 0 0 2 2 1 0 0
per2_per2 0 1 1 0 1 0 2
snp148_G snp149_A snp150_C snp151_C snp152_C snp153_G snp154_A
per0_per0 0 1 1 2 1 2 2
per1_per1 1 1 2 1 1 2 1
per2_per2 2 1 1 1 0 1 0
snp155_A snp156_A snp157_A snp158_T snp159_G snp160_C snp161_A
per0_per0 0 0 2 2 0 1 1
per1_per1 1 2 1 2 2 2 1
per2_per2 0 0 2 0 1 0 1
snp162_T snp163_A snp164_T snp165_G snp166_T snp167_T snp168_C
per0_per0 2 1 0 0 2 2 0
per1_per1 2 1 1 1 1 1 1
per2_per2 1 0 1 1 1 1 1
snp169_C snp170_A snp171_C snp172_G snp173_A snp174_A snp175_C
per0_per0 1 1 2 1 0 0 1
per1_per1 1 1 2 1 1 NA 1
per2_per2 2 0 0 2 1 1 0
snp176_T snp177_C snp178_A snp179_G snp180_A snp181_C snp182_A
per0_per0 1 0 0 2 0 0 1
per1_per1 0 NA 2 0 0 1 0
per2_per2 2 1 1 0 1 1 0
snp183_G snp184_T snp185_T snp186_T snp187_A snp188_G snp189_A
per0_per0 1 1 2 1 0 2 2
per1_per1 NA 1 1 0 1 1 1
per2_per2 0 1 1 1 1 0 0
snp190_C snp191_C snp192_C snp193_T snp194_A snp195_C snp196_T
per0_per0 1 1 1 1 1 1 0
per1_per1 1 0 1 2 1 2 2
per2_per2 1 1 0 1 1 2 2
snp197_T snp198_A snp199_T snp200_C snp201_C snp202_C snp203_G
per0_per0 0 1 0 2 1 1 0
per1_per1 0 1 2 2 0 2 1
per2_per2 1 1 2 1 2 2 0
snp204_G snp205_A snp206_T snp207_G snp208_G snp209_A snp210_A
per0_per0 1 1 NA 2 1 0 1
per1_per1 1 1 2 0 0 1 2
per2_per2 1 1 0 2 0 0 1
snp211_G snp212_T snp213_C snp214_A snp215_C snp216_G snp217_A
per0_per0 1 0 0 1 1 2 0
per1_per1 1 2 0 1 1 0 1
per2_per2 1 0 1 0 0 2 NA
snp218_G snp219_G snp220_G snp221_G snp222_A snp223_C snp224_T
per0_per0 0 1 0 1 1 1 1
per1_per1 1 2 2 1 2 0 2
per2_per2 1 1 0 0 NA 2 1
snp225_G snp226_C snp227_T snp228_T snp229_A snp230_G snp231_T
per0_per0 1 1 1 1 1 2 2
per1_per1 2 0 2 1 1 0 2
per2_per2 1 0 2 1 0 1 1
snp232_A snp233_A snp234_G snp235_A snp236_A snp237_C snp238_A
per0_per0 0 0 2 1 0 1 0
per1_per1 1 1 0 0 0 1 1
per2_per2 1 2 1 0 1 2 0
snp239_T snp240_C snp241_T snp242_T snp243_A snp244_C snp245_G
per0_per0 1 1 2 1 0 2 2
per1_per1 2 1 1 1 1 2 0
per2_per2 1 1 0 1 0 1 1
snp246_A snp247_T snp248_C snp249_T snp250_T snp251_C snp252_G
per0_per0 1 0 2 0 2 1 0
per1_per1 2 0 0 0 1 1 1
per2_per2 0 1 1 1 NA 1 1
snp253_A snp254_C snp255_A snp256_T snp257_G snp258_A snp259_G
per0_per0 1 2 0 1 1 1 1
per1_per1 1 2 0 1 0 1 2
per2_per2 0 2 0 1 1 2 1
snp260_C snp261_A snp262_A snp263_T snp264_T snp265_T snp266_A
per0_per0 1 1 1 1 1 2 0
per1_per1 0 2 0 1 1 1 0
per2_per2 1 0 1 1 2 2 1
snp267_G snp268_G snp269_T snp270_T snp271_G snp272_T snp273_T
per0_per0 0 1 1 2 0 0 0
per1_per1 1 1 NA 0 1 1 1
per2_per2 2 0 1 2 0 0 2
snp274_A snp275_G snp276_A snp277_T snp278_T snp279_G snp280_G
per0_per0 1 1 1 1 1 0 0
per1_per1 1 0 2 0 1 1 2
per2_per2 1 1 1 2 0 0 2
snp281_T snp282_A snp283_A snp284_C snp285_T snp286_T snp287_G
per0_per0 0 0 2 1 1 1 1
per1_per1 0 1 1 2 0 0 0
per2_per2 1 1 1 1 1 1 1
snp288_T snp289_A snp290_T snp291_T snp292_T snp293_G snp294_G
per0_per0 1 1 2 1 0 2 1
per1_per1 0 2 1 2 1 0 2
per2_per2 1 1 1 2 1 0 2
snp295_C snp296_T snp297_A snp298_C snp299_C snp300_C snp301_T
per0_per0 1 0 1 1 1 1 NA
per1_per1 1 0 0 2 2 1 1
per2_per2 1 1 1 1 2 2 1
snp302_A snp303_G snp304_C snp305_G snp306_C snp307_T snp308_C
per0_per0 1 0 2 0 1 0 1
per1_per1 0 0 0 0 1 1 1
per2_per2 1 2 1 1 1 1 0
snp309_A snp310_C snp311_G snp312_T snp313_T snp314_C snp315_A
per0_per0 1 2 0 1 1 1 2
per1_per1 1 2 1 1 0 1 1
per2_per2 1 1 1 1 1 0 0
snp316_C snp317_T snp318_T snp319_C snp320_C snp321_C snp322_T
per0_per0 0 1 1 1 1 0 1
per1_per1 1 1 2 1 0 0 0
per2_per2 1 1 1 0 1 2 1
snp323_A snp324_C snp325_A snp326_A snp327_A snp328_C snp329_G
per0_per0 2 1 1 0 1 2 0
per1_per1 2 2 0 1 0 1 1
per2_per2 0 1 1 2 0 1 1
snp330_G snp331_G snp332_G snp333_T snp334_A snp335_T snp336_A
per0_per0 0 2 1 2 2 2 0
per1_per1 0 1 0 2 0 1 0
per2_per2 1 1 NA 2 1 1 1
snp337_C snp338_C snp339_A snp340_G snp341_C snp342_T snp343_A
per0_per0 1 0 1 2 0 1 1
per1_per1 1 2 1 1 0 2 2
per2_per2 1 1 0 1 1 0 2
snp344_T snp345_G snp346_C snp347_T snp348_C snp349_C snp350_C
per0_per0 2 0 0 1 1 1 2
per1_per1 1 0 0 2 2 0 0
per2_per2 2 1 1 1 1 1 0
snp351_A snp352_A snp353_T snp354_G snp355_T snp356_T snp357_A
per0_per0 1 2 1 2 1 2 2
per1_per1 1 2 NA 0 2 2 0
per2_per2 0 1 NA 0 2 1 1
snp358_A snp359_A snp360_A snp361_G snp362_A snp363_G snp364_C
per0_per0 1 0 1 1 1 1 1
per1_per1 1 1 0 1 1 0 1
per2_per2 0 0 0 1 2 1 1
snp365_C snp366_A snp367_A snp368_C snp369_G snp370_T snp371_T
per0_per0 0 1 1 0 0 1 1
per1_per1 1 1 2 1 1 1 1
per2_per2 2 0 2 2 1 1 0
snp372_T snp373_G snp374_G snp375_T snp376_A snp377_G snp378_G
per0_per0 0 1 1 1 0 2 1
per1_per1 2 1 1 1 1 1 1
per2_per2 2 0 2 0 1 1 1
snp379_T snp380_A snp381_A snp382_T snp383_C snp384_A snp385_T
per0_per0 1 0 1 0 1 1 0
per1_per1 1 1 1 0 0 0 2
per2_per2 0 0 1 1 1 2 1
snp386_C snp387_A snp388_G snp389_C snp390_T snp391_A snp392_G
per0_per0 1 2 1 1 1 2 1
per1_per1 1 0 0 0 1 1 1
per2_per2 1 1 NA 1 2 1 1
snp393_C snp394_T snp395_G snp396_C snp397_T snp398_C snp399_T
per0_per0 2 0 0 1 2 0 2
per1_per1 0 0 2 1 2 2 2
per2_per2 0 1 1 0 2 0 1
snp400_A snp401_C snp402_T snp403_A snp404_C snp405_A snp406_G
per0_per0 1 2 1 0 1 0 1
per1_per1 1 0 1 2 2 0 2
per2_per2 1 0 0 1 1 1 0
snp407_A snp408_T snp409_G snp410_A snp411_G snp412_G snp413_C
per0_per0 0 2 1 1 1 1 0
per1_per1 1 1 2 2 2 1 2
per2_per2 1 2 1 2 1 1 NA
snp414_T snp415_A snp416_T snp417_A snp418_G snp419_C snp420_A
per0_per0 1 1 1 0 1 0 1
per1_per1 1 1 1 0 2 1 1
per2_per2 1 1 1 0 1 2 2
snp421_C snp422_G snp423_G snp424_C snp425_C snp426_G snp427_T
per0_per0 1 2 2 0 1 1 1
per1_per1 1 2 2 2 0 1 1
per2_per2 2 1 0 1 0 1 0
snp428_G snp429_T snp430_A snp431_A snp432_A snp433_A snp434_G
per0_per0 0 1 1 0 2 2 0
per1_per1 1 1 0 1 1 2 1
per2_per2 2 2 1 2 2 1 2
snp435_A snp436_A snp437_C snp438_T snp439_T snp440_C snp441_A
per0_per0 2 2 1 2 1 1 1
per1_per1 1 1 0 0 0 1 1
per2_per2 1 1 1 1 1 2 0
snp442_C snp443_C snp444_G snp445_T snp446_C snp447_A snp448_A
per0_per0 0 1 1 0 1 2 0
per1_per1 1 1 1 2 1 1 1
per2_per2 0 0 2 1 0 1 0
snp449_T snp450_A snp451_A snp452_A snp453_T snp454_T snp455_A
per0_per0 0 1 0 1 1 2 1
per1_per1 1 0 2 2 1 1 2
per2_per2 1 1 0 0 2 1 1
snp456_A snp457_C snp458_A snp459_A snp460_C snp461_A snp462_T
per0_per0 2 1 2 1 2 0 1
per1_per1 0 2 2 1 1 2 1
per2_per2 2 1 1 1 1 1 0
snp463_G snp464_T snp465_T snp466_A snp467_T snp468_C snp469_T
per0_per0 0 2 0 2 1 2 1
per1_per1 1 2 1 2 0 1 0
per2_per2 0 1 1 1 1 0 1
snp470_C snp471_G snp472_A snp473_C snp474_A snp475_A snp476_T
per0_per0 1 1 1 1 2 1 1
per1_per1 2 0 2 1 1 1 1
per2_per2 0 0 0 0 1 NA 1
snp477_C snp478_G snp479_A snp480_T snp481_G snp482_T snp483_C
per0_per0 1 0 1 1 0 1 1
per1_per1 2 NA 1 1 1 1 1
per2_per2 1 2 1 1 0 0 0
snp484_A snp485_G snp486_G snp487_T snp488_A snp489_C snp490_A
per0_per0 2 1 2 1 2 0 0
per1_per1 1 NA 2 1 0 2 0
per2_per2 1 0 1 0 1 0 1
snp491_A snp492_C snp493_C snp494_T snp495_A snp496_A snp497_A
per0_per0 1 2 0 1 1 1 1
per1_per1 1 2 0 1 1 0 2
per2_per2 1 1 1 2 1 1 0
snp498_T snp499_A snp500_T snp501_G snp502_A snp503_T snp504_G
per0_per0 1 2 1 0 0 1 1
per1_per1 2 1 1 1 0 2 0
per2_per2 0 0 1 0 2 2 1
snp505_T snp506_C snp507_C snp508_A snp509_C snp510_A snp511_A
per0_per0 0 0 1 1 1 1 1
per1_per1 0 1 2 1 1 2 0
per2_per2 0 1 1 1 2 1 1
snp512_G snp513_C snp514_C snp515_G snp516_A snp517_C snp518_G
per0_per0 0 2 1 1 2 2 2
per1_per1 1 1 1 1 1 1 1
per2_per2 1 1 0 1 NA 2 1
snp519_C snp520_C snp521_A snp522_A snp523_T snp524_A snp525_C
per0_per0 2 1 1 2 1 1 1
per1_per1 2 0 1 0 1 1 2
per2_per2 1 1 1 1 0 1 1
snp526_G snp527_A snp528_T snp529_C snp530_T snp531_C snp532_A
per0_per0 1 2 1 2 0 0 1
per1_per1 1 1 2 1 1 1 2
per2_per2 1 2 1 2 0 1 1
snp533_A snp534_C snp535_A snp536_A snp537_C snp538_T snp539_G
per0_per0 0 2 1 0 1 1 0
per1_per1 2 1 1 1 2 1 1
per2_per2 2 1 1 1 1 0 2
snp540_C snp541_G snp542_A snp543_G snp544_T snp545_C snp546_T
per0_per0 1 1 2 2 0 2 2
per1_per1 1 2 2 1 0 1 2
per2_per2 0 1 1 1 1 2 0
snp547_C snp548_C snp549_G snp550_A snp551_C snp552_A snp553_A
per0_per0 1 0 1 1 0 1 1
per1_per1 0 1 1 0 1 1 0
per2_per2 1 2 0 0 1 0 1
snp554_C snp555_G snp556_G snp557_C snp558_G snp559_G snp560_T
per0_per0 2 0 1 1 0 1 2
per1_per1 1 0 0 1 0 1 1
per2_per2 2 2 2 0 1 0 0
snp561_C snp562_T snp563_T snp564_G snp565_C snp566_T snp567_C
per0_per0 2 2 2 0 0 0 1
per1_per1 0 1 1 1 0 1 0
per2_per2 0 1 2 1 0 0 0
snp568_T snp569_T snp570_C snp571_A snp572_A snp573_A snp574_T
per0_per0 0 1 1 1 0 2 1
per1_per1 0 2 2 0 1 0 1
per2_per2 2 1 2 0 1 0 0
snp575_T snp576_G snp577_A snp578_T snp579_G snp580_C snp581_C
per0_per0 1 0 2 1 1 0 2
per1_per1 1 1 1 0 1 0 0
per2_per2 0 0 1 0 1 1 0
snp582_T snp583_G snp584_A snp585_G snp586_G snp587_G snp588_C
per0_per0 0 1 1 0 2 2 2
per1_per1 1 0 1 1 1 1 1
per2_per2 2 1 1 0 1 0 1
snp589_C snp590_G snp591_C snp592_G snp593_G snp594_G snp595_A
per0_per0 2 0 1 1 0 0 NA
per1_per1 2 2 1 1 1 2 1
per2_per2 2 0 0 1 0 0 2
snp596_A snp597_T snp598_T snp599_C snp600_A snp601_A snp602_A
per0_per0 1 1 0 2 1 0 NA
per1_per1 1 2 0 0 1 1 2
per2_per2 1 1 2 1 0 1 0
snp603_A snp604_G snp605_A snp606_G snp607_C snp608_C snp609_T
per0_per0 1 0 0 1 1 0 2
per1_per1 1 0 1 1 2 1 2
per2_per2 2 1 0 1 1 NA 0
snp610_C snp611_C snp612_G snp613_A snp614_T snp615_A snp616_C
per0_per0 0 0 1 1 0 1 1
per1_per1 2 1 1 0 1 1 0
per2_per2 1 1 0 2 0 1 2
snp617_G snp618_C snp619_G snp620_C snp621_C snp622_C snp623_C
per0_per0 1 0 2 1 0 0 0
per1_per1 1 2 1 2 0 1 0
per2_per2 2 2 1 2 0 1 1
snp624_A snp625_T snp626_T snp627_A snp628_T snp629_A snp630_C
per0_per0 1 0 1 1 0 NA 0
per1_per1 1 0 1 1 1 1 1
per2_per2 1 1 0 1 0 1 0
snp631_G snp632_T snp633_C snp634_A snp635_G snp636_G snp637_A
per0_per0 1 1 1 0 0 1 1
per1_per1 1 2 2 1 0 1 NA
per2_per2 2 1 1 1 0 NA 0
snp638_A snp639_G snp640_T snp641_T snp642_T snp643_G snp644_C
per0_per0 1 0 2 2 1 2 2
per1_per1 1 1 1 0 1 1 1
per2_per2 1 2 0 2 1 2 0
snp645_G snp646_A snp647_T snp648_G snp649_G snp650_G snp651_A
per0_per0 1 0 0 1 0 1 1
per1_per1 1 2 0 0 1 1 2
per2_per2 2 1 1 1 1 1 0
snp652_C snp653_C snp654_T snp655_T snp656_A snp657_G snp658_C
per0_per0 2 1 1 0 2 2 2
per1_per1 1 2 1 1 1 2 2
per2_per2 0 0 1 1 2 1 0
snp659_T snp660_C snp661_T snp662_T snp663_A snp664_A snp665_G
per0_per0 1 1 1 0 1 1 2
per1_per1 1 0 0 1 1 NA 1
per2_per2 2 0 1 0 1 1 1
snp666_G snp667_C snp668_T snp669_C snp670_C snp671_G snp672_C
per0_per0 0 0 1 1 0 2 0
per1_per1 2 2 1 0 1 1 1
per2_per2 0 1 2 1 1 2 0
snp673_A snp674_T snp675_C snp676_G snp677_C snp678_T snp679_T
per0_per0 1 1 1 0 1 0 1
per1_per1 0 1 1 0 0 1 1
per2_per2 1 1 1 1 0 1 1
snp680_T snp681_T snp682_G snp683_C snp684_A snp685_A snp686_G
per0_per0 2 0 2 1 1 0 1
per1_per1 1 2 1 1 0 1 0
per2_per2 1 1 1 2 1 1 2
snp687_A snp688_C snp689_C snp690_G snp691_G snp692_G snp693_G
per0_per0 1 0 NA 0 1 0 0
per1_per1 0 0 2 0 1 2 1
per2_per2 1 1 0 0 1 0 1
snp694_G snp695_G snp696_T snp697_C snp698_C snp699_G snp700_T
per0_per0 1 2 1 0 2 0 1
per1_per1 2 1 2 1 2 1 0
per2_per2 0 2 2 1 0 2 NA
snp701_C snp702_T snp703_T snp704_T snp705_T snp706_G snp707_G
per0_per0 0 0 0 1 1 NA 1
per1_per1 2 1 2 1 0 1 1
per2_per2 0 0 1 0 0 0 0
snp708_A snp709_T snp710_T snp711_C snp712_T snp713_A snp714_G
per0_per0 0 0 0 1 0 2 0
per1_per1 0 1 0 NA 1 2 1
per2_per2 0 1 1 2 NA 0 0
snp715_T snp716_A snp717_C snp718_G snp719_G snp720_A snp721_G
per0_per0 1 1 2 1 0 NA 1
per1_per1 2 1 2 0 1 1 0
per2_per2 1 1 1 2 1 1 0
snp722_G snp723_A snp724_C snp725_G snp726_A snp727_A snp728_G
per0_per0 1 1 1 0 0 0 0
per1_per1 2 1 2 1 1 1 1
per2_per2 1 1 1 1 1 0 1
snp729_T snp730_G snp731_A snp732_G snp733_T snp734_A snp735_G
per0_per0 2 0 0 1 1 0 0
per1_per1 2 2 1 1 2 0 2
per2_per2 2 1 2 1 1 2 1
snp736_G snp737_G snp738_T snp739_C snp740_A snp741_A snp742_G
per0_per0 1 0 1 2 1 0 0
per1_per1 0 0 2 0 1 0 1
per2_per2 NA 1 1 2 0 2 0
snp743_C snp744_C snp745_T snp746_C snp747_G snp748_A snp749_A
per0_per0 1 2 2 2 2 1 0
per1_per1 1 1 1 1 2 1 1
per2_per2 2 0 1 1 1 NA 2
snp750_C snp751_C snp752_A snp753_G snp754_G snp755_A snp756_T
per0_per0 0 0 1 1 1 0 1
per1_per1 2 1 1 1 0 0 1
per2_per2 1 0 2 1 1 1 0
snp757_C snp758_C snp759_T snp760_C snp761_T snp762_C snp763_T
per0_per0 0 2 0 0 2 1 2
per1_per1 0 0 0 1 0 1 2
per2_per2 2 0 2 0 2 0 1
snp764_G snp765_A snp766_C snp767_C snp768_C snp769_C snp770_C
per0_per0 0 2 1 1 0 0 2
per1_per1 NA 0 0 1 1 0 0
per2_per2 2 0 2 0 0 2 NA
snp771_T snp772_T snp773_G snp774_A snp775_C snp776_C snp777_A
per0_per0 1 0 1 0 2 0 0
per1_per1 1 0 1 0 2 0 0
per2_per2 1 0 0 2 1 1 1
snp778_G snp779_T snp780_C snp781_T snp782_G snp783_C snp784_A
per0_per0 0 2 1 2 1 1 2
per1_per1 1 1 1 1 1 0 0
per2_per2 2 1 1 1 0 1 0
snp785_T snp786_G snp787_G snp788_C snp789_G snp790_G snp791_C
per0_per0 1 0 0 0 1 NA 2
per1_per1 1 0 2 1 1 1 0
per2_per2 0 0 0 1 1 2 2
snp792_T snp793_T snp794_C snp795_A snp796_T snp797_C snp798_T
per0_per0 0 2 1 2 1 0 1
per1_per1 0 1 1 1 2 1 1
per2_per2 0 1 0 0 1 1 1
snp799_T snp800_T snp801_A snp802_G snp803_T snp804_T snp805_G
per0_per0 0 1 1 1 1 1 0
per1_per1 1 1 1 0 1 0 2
per2_per2 1 1 1 0 2 1 0
snp806_G snp807_A snp808_G snp809_T snp810_G snp811_A snp812_C
per0_per0 2 1 1 0 1 0 2
per1_per1 2 2 1 1 2 1 0
per2_per2 1 0 2 1 1 1 2
snp813_T snp814_T snp815_G snp816_A snp817_T snp818_G snp819_A
per0_per0 1 1 1 1 0 1 0
per1_per1 2 2 1 0 1 1 2
per2_per2 0 0 2 1 0 1 0
snp820_C snp821_A snp822_T snp823_G snp824_C snp825_T snp826_A
per0_per0 0 1 2 1 0 0 0
per1_per1 2 1 0 1 2 1 0
per2_per2 0 1 1 0 0 1 1
snp827_A snp828_G snp829_T snp830_T snp831_C snp832_A snp833_C
per0_per0 1 1 0 0 0 2 1
per1_per1 0 0 1 1 0 0 0
per2_per2 1 1 0 0 0 2 1
snp834_A snp835_G snp836_G snp837_A snp838_T snp839_T snp840_C
per0_per0 1 1 1 1 1 2 0
per1_per1 1 2 1 0 1 0 0
per2_per2 0 1 2 1 1 1 1
snp841_C snp842_A snp843_T snp844_G snp845_C snp846_A snp847_G
per0_per0 1 0 0 1 1 1 NA
per1_per1 2 1 2 0 0 1 1
per2_per2 0 0 0 1 1 0 1
snp848_G snp849_A snp850_G snp851_G snp852_G snp853_A snp854_A
per0_per0 1 1 1 0 1 0 0
per1_per1 0 1 1 0 1 0 0
per2_per2 0 2 2 2 1 1 0
snp855_C snp856_A snp857_T snp858_G snp859_A snp860_G snp861_T
per0_per0 2 1 0 0 1 1 0
per1_per1 1 2 2 1 1 NA 1
per2_per2 1 1 1 0 1 2 0
snp862_T snp863_C snp864_G snp865_A snp866_G snp867_C snp868_T
per0_per0 0 1 1 1 1 1 1
per1_per1 2 2 1 0 2 2 2
per2_per2 1 1 2 0 1 0 1
snp869_A snp870_A snp871_C snp872_A snp873_T snp874_T snp875_C
per0_per0 1 1 1 0 2 2 0
per1_per1 0 1 0 2 1 1 NA
per2_per2 2 0 2 1 1 2 0
snp876_T snp877_G snp878_C snp879_G snp880_G snp881_C snp882_T
per0_per0 1 0 0 0 1 1 1
per1_per1 1 1 1 1 1 0 0
per2_per2 1 2 2 2 0 1 0
snp883_C snp884_G snp885_G snp886_G snp887_C snp888_C snp889_T
per0_per0 0 1 1 1 1 1 2
per1_per1 1 2 2 0 0 0 1
per2_per2 0 1 1 1 1 NA 0
snp890_A snp891_T snp892_G snp893_T snp894_A snp895_C snp896_G
per0_per0 1 0 0 1 0 1 0
per1_per1 0 1 2 1 1 1 0
per2_per2 1 0 0 1 1 0 1
snp897_G snp898_T snp899_A snp900_C snp901_T snp902_G snp903_T
per0_per0 0 1 2 1 0 0 1
per1_per1 0 1 1 1 1 1 0
per2_per2 1 1 1 1 2 0 2
snp904_T snp905_C snp906_A snp907_C snp908_T snp909_T snp910_A
per0_per0 1 0 2 1 2 NA 1
per1_per1 2 1 2 2 1 1 NA
per2_per2 2 1 0 1 2 0 2
snp911_T snp912_G snp913_T snp914_T snp915_A snp916_T snp917_C
per0_per0 1 2 2 0 1 0 1
per1_per1 0 2 1 1 1 1 0
per2_per2 0 0 1 2 1 1 2
snp918_G snp919_C snp920_G snp921_T snp922_G snp923_A snp924_C
per0_per0 0 1 1 0 0 1 1
per1_per1 2 0 2 2 2 1 1
per2_per2 1 1 1 2 0 1 0
snp925_A snp926_T snp927_C snp928_G snp929_G snp930_A snp931_C
per0_per0 1 NA 1 2 2 0 1
per1_per1 0 1 0 0 0 1 1
per2_per2 0 1 2 1 0 1 2
snp932_T snp933_G snp934_G snp935_C snp936_A snp937_T snp938_G
per0_per0 2 2 1 2 2 1 1
per1_per1 0 2 0 0 1 1 1
per2_per2 2 0 1 1 1 1 1
snp939_C snp940_C snp941_T snp942_G snp943_G snp944_T snp945_T
per0_per0 0 1 1 2 1 1 2
per1_per1 0 0 1 2 1 2 1
per2_per2 1 1 1 1 2 1 1
snp946_A snp947_A snp948_A snp949_A snp950_C snp951_T snp952_G
per0_per0 1 0 1 2 0 1 1
per1_per1 1 1 1 1 0 1 1
per2_per2 1 2 1 0 1 0 2
snp953_G snp954_G snp955_A snp956_T snp957_T snp958_T snp959_G
per0_per0 2 1 1 1 1 2 0
per1_per1 1 1 0 0 2 1 1
per2_per2 0 1 0 1 0 0 1
snp960_T snp961_A snp962_C snp963_T snp964_A snp965_G snp966_A
per0_per0 0 1 2 2 0 1 0
per1_per1 2 1 2 1 1 0 1
per2_per2 1 2 1 0 1 1 2
snp967_C snp968_T snp969_A snp970_G snp971_C snp972_G snp973_A
per0_per0 0 0 1 1 1 0 2
per1_per1 1 2 1 1 0 1 0
per2_per2 2 1 0 1 0 1 0
snp974_A snp975_G snp976_T snp977_T snp978_A snp979_A snp980_A
per0_per0 1 1 1 0 1 0 0
per1_per1 1 1 0 1 1 1 1
per2_per2 0 2 0 1 1 1 0
snp981_T snp982_T snp983_C snp984_G snp985_C snp986_C snp987_C
per0_per0 1 1 1 2 0 1 1
per1_per1 0 1 1 1 0 0 0
per2_per2 2 2 0 1 2 1 2
snp988_C snp989_T snp990_G snp991_A snp992_T snp993_C snp994_T
per0_per0 1 2 1 1 0 2 1
per1_per1 1 1 0 1 1 1 1
per2_per2 0 1 1 1 2 1 0
snp995_T snp996_G snp997_T snp998_C snp999_G
per0_per0 1 1 0 1 NA
per1_per1 1 1 1 0 1
per2_per2 1 0 2 0 2
per0_per0 per1_per1 per2_per2 per3_per3 per4_per4 per5_per5
0 1 1 2 0 1
per6_per6 per7_per7 per8_per8 per9_per9 per10_per10 per11_per11
1 1 1 1 2 2
per12_per12 per13_per13 per14_per14 per15_per15 per16_per16 per17_per17
1 1 1 0 0 1
per18_per18 per19_per19 per20_per20 per21_per21 per22_per22 per23_per23
2 1 2 1 1 0
per24_per24 per25_per25 per26_per26 per27_per27 per28_per28 per29_per29
1 0 2 1 2 1
per30_per30 per31_per31 per32_per32 per33_per33 per34_per34 per35_per35
0 1 1 0 0 1
per36_per36 per37_per37 per38_per38 per39_per39 per40_per40 per41_per41
0 0 1 2 0 2
per42_per42 per43_per43 per44_per44 per45_per45 per46_per46 per47_per47
1 2 1 1 1 0
per48_per48 per49_per49
0 1
snp0_A snp1_C snp2_G
per0_per0 0 1 1
per1_per1 1 1 1
per2_per2 1 0 0
per3_per3 2 0 0
per4_per4 0 1 0
per5_per5 1 1 1
per6_per6 1 0 2
per7_per7 1 2 2
per8_per8 1 1 0
per9_per9 1 2 1
per10_per10 2 1 1
per11_per11 2 0 0
per12_per12 1 1 1
per13_per13 1 2 1
per14_per14 1 1 0
per15_per15 0 1 1
per16_per16 0 1 1
per17_per17 1 2 1
per18_per18 2 1 1
per19_per19 1 0 0
per20_per20 2 1 2
per21_per21 1 1 NA
per22_per22 1 1 1
per23_per23 0 1 1
per24_per24 1 2 NA
per25_per25 0 2 0
per26_per26 2 2 1
per27_per27 1 0 1
per28_per28 2 1 1
per29_per29 1 2 0
per30_per30 0 0 1
per31_per31 1 1 0
per32_per32 1 1 1
per33_per33 0 1 0
per34_per34 0 2 1
per35_per35 1 1 1
per36_per36 0 1 0
per37_per37 0 2 1
per38_per38 1 1 0
per39_per39 2 0 0
per40_per40 0 0 2
per41_per41 2 1 2
per42_per42 1 0 0
per43_per43 2 0 0
per44_per44 1 1 2
per45_per45 1 2 1
per46_per46 1 0 2
per47_per47 0 0 1
per48_per48 0 1 1
per49_per49 1 1 1
snp0_A snp1_C snp2_G
per0_per0 0 1 1
per1_per1 1 1 1
per2_per2 1 0 0
BEDMatrix documentation built on July 8, 2020, 7:26 p.m.
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Description Details Slots Methods See Also Examples
Description
BEDMatrix is a class that maps a
PLINK .bed file
into memory and behaves similarly to a regular matrix by
implementing key methods such as [, dim, and dimnames.
Subsets are extracted directly and on-demand from the .bed file without
loading the entire file into memory.
Details
The subsets extracted from a BEDMatrix object are coded as the
allelic dosages of the first allele in the .bim file (A1), similarly to
.raw files
generated with the --recode A argument in
PLINK).
Internally, this class is an S4 class with the following slots that should
not be relied upon in actual code: xptr, dims, dnames,
and path. The .bed file is mapped into memory using mmap on
Unix and MapViewOfFile on Windows.
Slots
xptr:-
An external pointer to the underlying
Ccode. dims:-
An integer vector specifying the number of samples and variants as determined by the the accompanying .fam and .bim files or by the
nandpparameters of theBEDMatrixconstructor function. dnames:-
A list describing the row names and column names of the object as determined by the accompanying .fam and .bim files, or
NULLif thenandpparameters of theBEDMatrixconstructor function were provided. path:-
A character string containing the path to the .bed file.
Methods
[:Extract parts of an object
dim:Retrieve the dimension of an object
dimnames:Retrieve the dimnames of an object
dimnames<-:Set the dimnames of an object
as.matrix:Turn the object into a matrix
is.matrix:Test if the object is a matrix
length:Get the length of an object
str:Display the internal structure of an object
show:Display the object
See Also
BEDMatrix to create a BEDMatrix object from a .bed
file, BEDMatrix-package to learn more about the
BEDMatrix package,
LinkedMatrix to link
several BEDMatrix objects together.
Examples
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 | # Get the path to the example .bed file
path <- system.file("extdata", "example.bed",
package = "BEDMatrix")
# Create a BEDMatrix object the example .bed file
m <- BEDMatrix(path)
# Get the dimensions of the BEDMatrix object
dim(m)
# Get the row names of the BEDMatrix object
rownames(m)
# Get the column names of the BEDMatrix object
colnames(m)
# Extract genotypes for the specified sample(s)
m[1, ]
m[1:3, ]
m["per0_per0", ]
m[c("per0_per0", "per1_per1", "per2_per2"), ]
# Extract genotypes for a particular variant
m[, 1]
m[, c("snp0_A", "snp1_C", "snp2_G")]
# Extract genotypes for the specified samples and variants
m[
c("per0_per0", "per1_per1", "per2_per2"),
c("snp0_A", "snp1_C", "snp2_G")
]
|
Example output
Extracting number of samples and rownames from example.fam...
Extracting number of variants and colnames from example.bim...
[1] 50 1000
[1] "per0_per0" "per1_per1" "per2_per2" "per3_per3" "per4_per4"
[6] "per5_per5" "per6_per6" "per7_per7" "per8_per8" "per9_per9"
[11] "per10_per10" "per11_per11" "per12_per12" "per13_per13" "per14_per14"
[16] "per15_per15" "per16_per16" "per17_per17" "per18_per18" "per19_per19"
[21] "per20_per20" "per21_per21" "per22_per22" "per23_per23" "per24_per24"
[26] "per25_per25" "per26_per26" "per27_per27" "per28_per28" "per29_per29"
[31] "per30_per30" "per31_per31" "per32_per32" "per33_per33" "per34_per34"
[36] "per35_per35" "per36_per36" "per37_per37" "per38_per38" "per39_per39"
[41] "per40_per40" "per41_per41" "per42_per42" "per43_per43" "per44_per44"
[46] "per45_per45" "per46_per46" "per47_per47" "per48_per48" "per49_per49"
[1] "snp0_A" "snp1_C" "snp2_G" "snp3_G" "snp4_G" "snp5_T"
[7] "snp6_G" "snp7_A" "snp8_A" "snp9_C" "snp10_A" "snp11_C"
[13] "snp12_A" "snp13_T" "snp14_A" "snp15_G" "snp16_A" "snp17_T"
[19] "snp18_C" "snp19_G" "snp20_C" "snp21_G" "snp22_G" "snp23_C"
[25] "snp24_T" "snp25_A" "snp26_G" "snp27_G" "snp28_T" "snp29_T"
[31] "snp30_T" "snp31_A" "snp32_T" "snp33_C" "snp34_T" "snp35_A"
[37] "snp36_G" "snp37_G" "snp38_T" "snp39_C" "snp40_A" "snp41_C"
[43] "snp42_T" "snp43_T" "snp44_T" "snp45_C" "snp46_C" "snp47_A"
[49] "snp48_C" "snp49_C" "snp50_T" "snp51_T" "snp52_A" "snp53_C"
[55] "snp54_T" "snp55_C" "snp56_C" "snp57_A" "snp58_A" "snp59_G"
[61] "snp60_A" "snp61_A" "snp62_G" "snp63_G" "snp64_T" "snp65_G"
[67] "snp66_C" "snp67_G" "snp68_A" "snp69_A" "snp70_C" "snp71_G"
[73] "snp72_A" "snp73_C" "snp74_G" "snp75_T" "snp76_C" "snp77_C"
[79] "snp78_C" "snp79_A" "snp80_C" "snp81_A" "snp82_T" "snp83_G"
[85] "snp84_T" "snp85_T" "snp86_G" "snp87_A" "snp88_G" "snp89_G"
[91] "snp90_C" "snp91_G" "snp92_T" "snp93_T" "snp94_T" "snp95_A"
[97] "snp96_C" "snp97_G" "snp98_A" "snp99_T" "snp100_T" "snp101_T"
[103] "snp102_T" "snp103_G" "snp104_T" "snp105_C" "snp106_T" "snp107_T"
[109] "snp108_T" "snp109_A" "snp110_A" "snp111_A" "snp112_G" "snp113_G"
[115] "snp114_T" "snp115_T" "snp116_T" "snp117_T" "snp118_C" "snp119_T"
[121] "snp120_C" "snp121_T" "snp122_C" "snp123_A" "snp124_T" "snp125_C"
[127] "snp126_C" "snp127_A" "snp128_A" "snp129_T" "snp130_T" "snp131_G"
[133] "snp132_A" "snp133_T" "snp134_A" "snp135_G" "snp136_A" "snp137_G"
[139] "snp138_A" "snp139_G" "snp140_T" "snp141_A" "snp142_T" "snp143_G"
[145] "snp144_A" "snp145_C" "snp146_C" "snp147_T" "snp148_G" "snp149_A"
[151] "snp150_C" "snp151_C" "snp152_C" "snp153_G" "snp154_A" "snp155_A"
[157] "snp156_A" "snp157_A" "snp158_T" "snp159_G" "snp160_C" "snp161_A"
[163] "snp162_T" "snp163_A" "snp164_T" "snp165_G" "snp166_T" "snp167_T"
[169] "snp168_C" "snp169_C" "snp170_A" "snp171_C" "snp172_G" "snp173_A"
[175] "snp174_A" "snp175_C" "snp176_T" "snp177_C" "snp178_A" "snp179_G"
[181] "snp180_A" "snp181_C" "snp182_A" "snp183_G" "snp184_T" "snp185_T"
[187] "snp186_T" "snp187_A" "snp188_G" "snp189_A" "snp190_C" "snp191_C"
[193] "snp192_C" "snp193_T" "snp194_A" "snp195_C" "snp196_T" "snp197_T"
[199] "snp198_A" "snp199_T" "snp200_C" "snp201_C" "snp202_C" "snp203_G"
[205] "snp204_G" "snp205_A" "snp206_T" "snp207_G" "snp208_G" "snp209_A"
[211] "snp210_A" "snp211_G" "snp212_T" "snp213_C" "snp214_A" "snp215_C"
[217] "snp216_G" "snp217_A" "snp218_G" "snp219_G" "snp220_G" "snp221_G"
[223] "snp222_A" "snp223_C" "snp224_T" "snp225_G" "snp226_C" "snp227_T"
[229] "snp228_T" "snp229_A" "snp230_G" "snp231_T" "snp232_A" "snp233_A"
[235] "snp234_G" "snp235_A" "snp236_A" "snp237_C" "snp238_A" "snp239_T"
[241] "snp240_C" "snp241_T" "snp242_T" "snp243_A" "snp244_C" "snp245_G"
[247] "snp246_A" "snp247_T" "snp248_C" "snp249_T" "snp250_T" "snp251_C"
[253] "snp252_G" "snp253_A" "snp254_C" "snp255_A" "snp256_T" "snp257_G"
[259] "snp258_A" "snp259_G" "snp260_C" "snp261_A" "snp262_A" "snp263_T"
[265] "snp264_T" "snp265_T" "snp266_A" "snp267_G" "snp268_G" "snp269_T"
[271] "snp270_T" "snp271_G" "snp272_T" "snp273_T" "snp274_A" "snp275_G"
[277] "snp276_A" "snp277_T" "snp278_T" "snp279_G" "snp280_G" "snp281_T"
[283] "snp282_A" "snp283_A" "snp284_C" "snp285_T" "snp286_T" "snp287_G"
[289] "snp288_T" "snp289_A" "snp290_T" "snp291_T" "snp292_T" "snp293_G"
[295] "snp294_G" "snp295_C" "snp296_T" "snp297_A" "snp298_C" "snp299_C"
[301] "snp300_C" "snp301_T" "snp302_A" "snp303_G" "snp304_C" "snp305_G"
[307] "snp306_C" "snp307_T" "snp308_C" "snp309_A" "snp310_C" "snp311_G"
[313] "snp312_T" "snp313_T" "snp314_C" "snp315_A" "snp316_C" "snp317_T"
[319] "snp318_T" "snp319_C" "snp320_C" "snp321_C" "snp322_T" "snp323_A"
[325] "snp324_C" "snp325_A" "snp326_A" "snp327_A" "snp328_C" "snp329_G"
[331] "snp330_G" "snp331_G" "snp332_G" "snp333_T" "snp334_A" "snp335_T"
[337] "snp336_A" "snp337_C" "snp338_C" "snp339_A" "snp340_G" "snp341_C"
[343] "snp342_T" "snp343_A" "snp344_T" "snp345_G" "snp346_C" "snp347_T"
[349] "snp348_C" "snp349_C" "snp350_C" "snp351_A" "snp352_A" "snp353_T"
[355] "snp354_G" "snp355_T" "snp356_T" "snp357_A" "snp358_A" "snp359_A"
[361] "snp360_A" "snp361_G" "snp362_A" "snp363_G" "snp364_C" "snp365_C"
[367] "snp366_A" "snp367_A" "snp368_C" "snp369_G" "snp370_T" "snp371_T"
[373] "snp372_T" "snp373_G" "snp374_G" "snp375_T" "snp376_A" "snp377_G"
[379] "snp378_G" "snp379_T" "snp380_A" "snp381_A" "snp382_T" "snp383_C"
[385] "snp384_A" "snp385_T" "snp386_C" "snp387_A" "snp388_G" "snp389_C"
[391] "snp390_T" "snp391_A" "snp392_G" "snp393_C" "snp394_T" "snp395_G"
[397] "snp396_C" "snp397_T" "snp398_C" "snp399_T" "snp400_A" "snp401_C"
[403] "snp402_T" "snp403_A" "snp404_C" "snp405_A" "snp406_G" "snp407_A"
[409] "snp408_T" "snp409_G" "snp410_A" "snp411_G" "snp412_G" "snp413_C"
[415] "snp414_T" "snp415_A" "snp416_T" "snp417_A" "snp418_G" "snp419_C"
[421] "snp420_A" "snp421_C" "snp422_G" "snp423_G" "snp424_C" "snp425_C"
[427] "snp426_G" "snp427_T" "snp428_G" "snp429_T" "snp430_A" "snp431_A"
[433] "snp432_A" "snp433_A" "snp434_G" "snp435_A" "snp436_A" "snp437_C"
[439] "snp438_T" "snp439_T" "snp440_C" "snp441_A" "snp442_C" "snp443_C"
[445] "snp444_G" "snp445_T" "snp446_C" "snp447_A" "snp448_A" "snp449_T"
[451] "snp450_A" "snp451_A" "snp452_A" "snp453_T" "snp454_T" "snp455_A"
[457] "snp456_A" "snp457_C" "snp458_A" "snp459_A" "snp460_C" "snp461_A"
[463] "snp462_T" "snp463_G" "snp464_T" "snp465_T" "snp466_A" "snp467_T"
[469] "snp468_C" "snp469_T" "snp470_C" "snp471_G" "snp472_A" "snp473_C"
[475] "snp474_A" "snp475_A" "snp476_T" "snp477_C" "snp478_G" "snp479_A"
[481] "snp480_T" "snp481_G" "snp482_T" "snp483_C" "snp484_A" "snp485_G"
[487] "snp486_G" "snp487_T" "snp488_A" "snp489_C" "snp490_A" "snp491_A"
[493] "snp492_C" "snp493_C" "snp494_T" "snp495_A" "snp496_A" "snp497_A"
[499] "snp498_T" "snp499_A" "snp500_T" "snp501_G" "snp502_A" "snp503_T"
[505] "snp504_G" "snp505_T" "snp506_C" "snp507_C" "snp508_A" "snp509_C"
[511] "snp510_A" "snp511_A" "snp512_G" "snp513_C" "snp514_C" "snp515_G"
[517] "snp516_A" "snp517_C" "snp518_G" "snp519_C" "snp520_C" "snp521_A"
[523] "snp522_A" "snp523_T" "snp524_A" "snp525_C" "snp526_G" "snp527_A"
[529] "snp528_T" "snp529_C" "snp530_T" "snp531_C" "snp532_A" "snp533_A"
[535] "snp534_C" "snp535_A" "snp536_A" "snp537_C" "snp538_T" "snp539_G"
[541] "snp540_C" "snp541_G" "snp542_A" "snp543_G" "snp544_T" "snp545_C"
[547] "snp546_T" "snp547_C" "snp548_C" "snp549_G" "snp550_A" "snp551_C"
[553] "snp552_A" "snp553_A" "snp554_C" "snp555_G" "snp556_G" "snp557_C"
[559] "snp558_G" "snp559_G" "snp560_T" "snp561_C" "snp562_T" "snp563_T"
[565] "snp564_G" "snp565_C" "snp566_T" "snp567_C" "snp568_T" "snp569_T"
[571] "snp570_C" "snp571_A" "snp572_A" "snp573_A" "snp574_T" "snp575_T"
[577] "snp576_G" "snp577_A" "snp578_T" "snp579_G" "snp580_C" "snp581_C"
[583] "snp582_T" "snp583_G" "snp584_A" "snp585_G" "snp586_G" "snp587_G"
[589] "snp588_C" "snp589_C" "snp590_G" "snp591_C" "snp592_G" "snp593_G"
[595] "snp594_G" "snp595_A" "snp596_A" "snp597_T" "snp598_T" "snp599_C"
[601] "snp600_A" "snp601_A" "snp602_A" "snp603_A" "snp604_G" "snp605_A"
[607] "snp606_G" "snp607_C" "snp608_C" "snp609_T" "snp610_C" "snp611_C"
[613] "snp612_G" "snp613_A" "snp614_T" "snp615_A" "snp616_C" "snp617_G"
[619] "snp618_C" "snp619_G" "snp620_C" "snp621_C" "snp622_C" "snp623_C"
[625] "snp624_A" "snp625_T" "snp626_T" "snp627_A" "snp628_T" "snp629_A"
[631] "snp630_C" "snp631_G" "snp632_T" "snp633_C" "snp634_A" "snp635_G"
[637] "snp636_G" "snp637_A" "snp638_A" "snp639_G" "snp640_T" "snp641_T"
[643] "snp642_T" "snp643_G" "snp644_C" "snp645_G" "snp646_A" "snp647_T"
[649] "snp648_G" "snp649_G" "snp650_G" "snp651_A" "snp652_C" "snp653_C"
[655] "snp654_T" "snp655_T" "snp656_A" "snp657_G" "snp658_C" "snp659_T"
[661] "snp660_C" "snp661_T" "snp662_T" "snp663_A" "snp664_A" "snp665_G"
[667] "snp666_G" "snp667_C" "snp668_T" "snp669_C" "snp670_C" "snp671_G"
[673] "snp672_C" "snp673_A" "snp674_T" "snp675_C" "snp676_G" "snp677_C"
[679] "snp678_T" "snp679_T" "snp680_T" "snp681_T" "snp682_G" "snp683_C"
[685] "snp684_A" "snp685_A" "snp686_G" "snp687_A" "snp688_C" "snp689_C"
[691] "snp690_G" "snp691_G" "snp692_G" "snp693_G" "snp694_G" "snp695_G"
[697] "snp696_T" "snp697_C" "snp698_C" "snp699_G" "snp700_T" "snp701_C"
[703] "snp702_T" "snp703_T" "snp704_T" "snp705_T" "snp706_G" "snp707_G"
[709] "snp708_A" "snp709_T" "snp710_T" "snp711_C" "snp712_T" "snp713_A"
[715] "snp714_G" "snp715_T" "snp716_A" "snp717_C" "snp718_G" "snp719_G"
[721] "snp720_A" "snp721_G" "snp722_G" "snp723_A" "snp724_C" "snp725_G"
[727] "snp726_A" "snp727_A" "snp728_G" "snp729_T" "snp730_G" "snp731_A"
[733] "snp732_G" "snp733_T" "snp734_A" "snp735_G" "snp736_G" "snp737_G"
[739] "snp738_T" "snp739_C" "snp740_A" "snp741_A" "snp742_G" "snp743_C"
[745] "snp744_C" "snp745_T" "snp746_C" "snp747_G" "snp748_A" "snp749_A"
[751] "snp750_C" "snp751_C" "snp752_A" "snp753_G" "snp754_G" "snp755_A"
[757] "snp756_T" "snp757_C" "snp758_C" "snp759_T" "snp760_C" "snp761_T"
[763] "snp762_C" "snp763_T" "snp764_G" "snp765_A" "snp766_C" "snp767_C"
[769] "snp768_C" "snp769_C" "snp770_C" "snp771_T" "snp772_T" "snp773_G"
[775] "snp774_A" "snp775_C" "snp776_C" "snp777_A" "snp778_G" "snp779_T"
[781] "snp780_C" "snp781_T" "snp782_G" "snp783_C" "snp784_A" "snp785_T"
[787] "snp786_G" "snp787_G" "snp788_C" "snp789_G" "snp790_G" "snp791_C"
[793] "snp792_T" "snp793_T" "snp794_C" "snp795_A" "snp796_T" "snp797_C"
[799] "snp798_T" "snp799_T" "snp800_T" "snp801_A" "snp802_G" "snp803_T"
[805] "snp804_T" "snp805_G" "snp806_G" "snp807_A" "snp808_G" "snp809_T"
[811] "snp810_G" "snp811_A" "snp812_C" "snp813_T" "snp814_T" "snp815_G"
[817] "snp816_A" "snp817_T" "snp818_G" "snp819_A" "snp820_C" "snp821_A"
[823] "snp822_T" "snp823_G" "snp824_C" "snp825_T" "snp826_A" "snp827_A"
[829] "snp828_G" "snp829_T" "snp830_T" "snp831_C" "snp832_A" "snp833_C"
[835] "snp834_A" "snp835_G" "snp836_G" "snp837_A" "snp838_T" "snp839_T"
[841] "snp840_C" "snp841_C" "snp842_A" "snp843_T" "snp844_G" "snp845_C"
[847] "snp846_A" "snp847_G" "snp848_G" "snp849_A" "snp850_G" "snp851_G"
[853] "snp852_G" "snp853_A" "snp854_A" "snp855_C" "snp856_A" "snp857_T"
[859] "snp858_G" "snp859_A" "snp860_G" "snp861_T" "snp862_T" "snp863_C"
[865] "snp864_G" "snp865_A" "snp866_G" "snp867_C" "snp868_T" "snp869_A"
[871] "snp870_A" "snp871_C" "snp872_A" "snp873_T" "snp874_T" "snp875_C"
[877] "snp876_T" "snp877_G" "snp878_C" "snp879_G" "snp880_G" "snp881_C"
[883] "snp882_T" "snp883_C" "snp884_G" "snp885_G" "snp886_G" "snp887_C"
[889] "snp888_C" "snp889_T" "snp890_A" "snp891_T" "snp892_G" "snp893_T"
[895] "snp894_A" "snp895_C" "snp896_G" "snp897_G" "snp898_T" "snp899_A"
[901] "snp900_C" "snp901_T" "snp902_G" "snp903_T" "snp904_T" "snp905_C"
[907] "snp906_A" "snp907_C" "snp908_T" "snp909_T" "snp910_A" "snp911_T"
[913] "snp912_G" "snp913_T" "snp914_T" "snp915_A" "snp916_T" "snp917_C"
[919] "snp918_G" "snp919_C" "snp920_G" "snp921_T" "snp922_G" "snp923_A"
[925] "snp924_C" "snp925_A" "snp926_T" "snp927_C" "snp928_G" "snp929_G"
[931] "snp930_A" "snp931_C" "snp932_T" "snp933_G" "snp934_G" "snp935_C"
[937] "snp936_A" "snp937_T" "snp938_G" "snp939_C" "snp940_C" "snp941_T"
[943] "snp942_G" "snp943_G" "snp944_T" "snp945_T" "snp946_A" "snp947_A"
[949] "snp948_A" "snp949_A" "snp950_C" "snp951_T" "snp952_G" "snp953_G"
[955] "snp954_G" "snp955_A" "snp956_T" "snp957_T" "snp958_T" "snp959_G"
[961] "snp960_T" "snp961_A" "snp962_C" "snp963_T" "snp964_A" "snp965_G"
[967] "snp966_A" "snp967_C" "snp968_T" "snp969_A" "snp970_G" "snp971_C"
[973] "snp972_G" "snp973_A" "snp974_A" "snp975_G" "snp976_T" "snp977_T"
[979] "snp978_A" "snp979_A" "snp980_A" "snp981_T" "snp982_T" "snp983_C"
[985] "snp984_G" "snp985_C" "snp986_C" "snp987_C" "snp988_C" "snp989_T"
[991] "snp990_G" "snp991_A" "snp992_T" "snp993_C" "snp994_T" "snp995_T"
[997] "snp996_G" "snp997_T" "snp998_C" "snp999_G"
snp0_A snp1_C snp2_G snp3_G snp4_G snp5_T snp6_G snp7_A
0 1 1 1 0 2 1 0
snp8_A snp9_C snp10_A snp11_C snp12_A snp13_T snp14_A snp15_G
0 1 1 1 1 1 0 1
snp16_A snp17_T snp18_C snp19_G snp20_C snp21_G snp22_G snp23_C
1 1 0 1 1 2 0 NA
snp24_T snp25_A snp26_G snp27_G snp28_T snp29_T snp30_T snp31_A
0 1 1 1 2 1 1 1
snp32_T snp33_C snp34_T snp35_A snp36_G snp37_G snp38_T snp39_C
0 0 1 1 1 2 0 0
snp40_A snp41_C snp42_T snp43_T snp44_T snp45_C snp46_C snp47_A
2 1 0 0 1 0 0 NA
snp48_C snp49_C snp50_T snp51_T snp52_A snp53_C snp54_T snp55_C
2 2 1 0 1 1 2 2
snp56_C snp57_A snp58_A snp59_G snp60_A snp61_A snp62_G snp63_G
1 1 1 1 2 2 1 2
snp64_T snp65_G snp66_C snp67_G snp68_A snp69_A snp70_C snp71_G
0 1 1 1 0 1 2 2
snp72_A snp73_C snp74_G snp75_T snp76_C snp77_C snp78_C snp79_A
2 0 1 1 1 2 1 2
snp80_C snp81_A snp82_T snp83_G snp84_T snp85_T snp86_G snp87_A
2 1 0 1 0 1 1 2
snp88_G snp89_G snp90_C snp91_G snp92_T snp93_T snp94_T snp95_A
2 1 2 1 0 0 0 1
snp96_C snp97_G snp98_A snp99_T snp100_T snp101_T snp102_T snp103_G
0 2 2 2 2 0 NA 0
snp104_T snp105_C snp106_T snp107_T snp108_T snp109_A snp110_A snp111_A
1 1 1 1 0 0 0 1
snp112_G snp113_G snp114_T snp115_T snp116_T snp117_T snp118_C snp119_T
0 0 0 2 1 0 1 1
snp120_C snp121_T snp122_C snp123_A snp124_T snp125_C snp126_C snp127_A
0 1 0 1 NA NA 1 1
snp128_A snp129_T snp130_T snp131_G snp132_A snp133_T snp134_A snp135_G
1 0 0 1 0 1 0 2
snp136_A snp137_G snp138_A snp139_G snp140_T snp141_A snp142_T snp143_G
1 0 1 1 0 1 0 1
snp144_A snp145_C snp146_C snp147_T snp148_G snp149_A snp150_C snp151_C
1 0 1 1 0 1 1 2
snp152_C snp153_G snp154_A snp155_A snp156_A snp157_A snp158_T snp159_G
1 2 2 0 0 2 2 0
snp160_C snp161_A snp162_T snp163_A snp164_T snp165_G snp166_T snp167_T
1 1 2 1 0 0 2 2
snp168_C snp169_C snp170_A snp171_C snp172_G snp173_A snp174_A snp175_C
0 1 1 2 1 0 0 1
snp176_T snp177_C snp178_A snp179_G snp180_A snp181_C snp182_A snp183_G
1 0 0 2 0 0 1 1
snp184_T snp185_T snp186_T snp187_A snp188_G snp189_A snp190_C snp191_C
1 2 1 0 2 2 1 1
snp192_C snp193_T snp194_A snp195_C snp196_T snp197_T snp198_A snp199_T
1 1 1 1 0 0 1 0
snp200_C snp201_C snp202_C snp203_G snp204_G snp205_A snp206_T snp207_G
2 1 1 0 1 1 NA 2
snp208_G snp209_A snp210_A snp211_G snp212_T snp213_C snp214_A snp215_C
1 0 1 1 0 0 1 1
snp216_G snp217_A snp218_G snp219_G snp220_G snp221_G snp222_A snp223_C
2 0 0 1 0 1 1 1
snp224_T snp225_G snp226_C snp227_T snp228_T snp229_A snp230_G snp231_T
1 1 1 1 1 1 2 2
snp232_A snp233_A snp234_G snp235_A snp236_A snp237_C snp238_A snp239_T
0 0 2 1 0 1 0 1
snp240_C snp241_T snp242_T snp243_A snp244_C snp245_G snp246_A snp247_T
1 2 1 0 2 2 1 0
snp248_C snp249_T snp250_T snp251_C snp252_G snp253_A snp254_C snp255_A
2 0 2 1 0 1 2 0
snp256_T snp257_G snp258_A snp259_G snp260_C snp261_A snp262_A snp263_T
1 1 1 1 1 1 1 1
snp264_T snp265_T snp266_A snp267_G snp268_G snp269_T snp270_T snp271_G
1 2 0 0 1 1 2 0
snp272_T snp273_T snp274_A snp275_G snp276_A snp277_T snp278_T snp279_G
0 0 1 1 1 1 1 0
snp280_G snp281_T snp282_A snp283_A snp284_C snp285_T snp286_T snp287_G
0 0 0 2 1 1 1 1
snp288_T snp289_A snp290_T snp291_T snp292_T snp293_G snp294_G snp295_C
1 1 2 1 0 2 1 1
snp296_T snp297_A snp298_C snp299_C snp300_C snp301_T snp302_A snp303_G
0 1 1 1 1 NA 1 0
snp304_C snp305_G snp306_C snp307_T snp308_C snp309_A snp310_C snp311_G
2 0 1 0 1 1 2 0
snp312_T snp313_T snp314_C snp315_A snp316_C snp317_T snp318_T snp319_C
1 1 1 2 0 1 1 1
snp320_C snp321_C snp322_T snp323_A snp324_C snp325_A snp326_A snp327_A
1 0 1 2 1 1 0 1
snp328_C snp329_G snp330_G snp331_G snp332_G snp333_T snp334_A snp335_T
2 0 0 2 1 2 2 2
snp336_A snp337_C snp338_C snp339_A snp340_G snp341_C snp342_T snp343_A
0 1 0 1 2 0 1 1
snp344_T snp345_G snp346_C snp347_T snp348_C snp349_C snp350_C snp351_A
2 0 0 1 1 1 2 1
snp352_A snp353_T snp354_G snp355_T snp356_T snp357_A snp358_A snp359_A
2 1 2 1 2 2 1 0
snp360_A snp361_G snp362_A snp363_G snp364_C snp365_C snp366_A snp367_A
1 1 1 1 1 0 1 1
snp368_C snp369_G snp370_T snp371_T snp372_T snp373_G snp374_G snp375_T
0 0 1 1 0 1 1 1
snp376_A snp377_G snp378_G snp379_T snp380_A snp381_A snp382_T snp383_C
0 2 1 1 0 1 0 1
snp384_A snp385_T snp386_C snp387_A snp388_G snp389_C snp390_T snp391_A
1 0 1 2 1 1 1 2
snp392_G snp393_C snp394_T snp395_G snp396_C snp397_T snp398_C snp399_T
1 2 0 0 1 2 0 2
snp400_A snp401_C snp402_T snp403_A snp404_C snp405_A snp406_G snp407_A
1 2 1 0 1 0 1 0
snp408_T snp409_G snp410_A snp411_G snp412_G snp413_C snp414_T snp415_A
2 1 1 1 1 0 1 1
snp416_T snp417_A snp418_G snp419_C snp420_A snp421_C snp422_G snp423_G
1 0 1 0 1 1 2 2
snp424_C snp425_C snp426_G snp427_T snp428_G snp429_T snp430_A snp431_A
0 1 1 1 0 1 1 0
snp432_A snp433_A snp434_G snp435_A snp436_A snp437_C snp438_T snp439_T
2 2 0 2 2 1 2 1
snp440_C snp441_A snp442_C snp443_C snp444_G snp445_T snp446_C snp447_A
1 1 0 1 1 0 1 2
snp448_A snp449_T snp450_A snp451_A snp452_A snp453_T snp454_T snp455_A
0 0 1 0 1 1 2 1
snp456_A snp457_C snp458_A snp459_A snp460_C snp461_A snp462_T snp463_G
2 1 2 1 2 0 1 0
snp464_T snp465_T snp466_A snp467_T snp468_C snp469_T snp470_C snp471_G
2 0 2 1 2 1 1 1
snp472_A snp473_C snp474_A snp475_A snp476_T snp477_C snp478_G snp479_A
1 1 2 1 1 1 0 1
snp480_T snp481_G snp482_T snp483_C snp484_A snp485_G snp486_G snp487_T
1 0 1 1 2 1 2 1
snp488_A snp489_C snp490_A snp491_A snp492_C snp493_C snp494_T snp495_A
2 0 0 1 2 0 1 1
snp496_A snp497_A snp498_T snp499_A snp500_T snp501_G snp502_A snp503_T
1 1 1 2 1 0 0 1
snp504_G snp505_T snp506_C snp507_C snp508_A snp509_C snp510_A snp511_A
1 0 0 1 1 1 1 1
snp512_G snp513_C snp514_C snp515_G snp516_A snp517_C snp518_G snp519_C
0 2 1 1 2 2 2 2
snp520_C snp521_A snp522_A snp523_T snp524_A snp525_C snp526_G snp527_A
1 1 2 1 1 1 1 2
snp528_T snp529_C snp530_T snp531_C snp532_A snp533_A snp534_C snp535_A
1 2 0 0 1 0 2 1
snp536_A snp537_C snp538_T snp539_G snp540_C snp541_G snp542_A snp543_G
0 1 1 0 1 1 2 2
snp544_T snp545_C snp546_T snp547_C snp548_C snp549_G snp550_A snp551_C
0 2 2 1 0 1 1 0
snp552_A snp553_A snp554_C snp555_G snp556_G snp557_C snp558_G snp559_G
1 1 2 0 1 1 0 1
snp560_T snp561_C snp562_T snp563_T snp564_G snp565_C snp566_T snp567_C
2 2 2 2 0 0 0 1
snp568_T snp569_T snp570_C snp571_A snp572_A snp573_A snp574_T snp575_T
0 1 1 1 0 2 1 1
snp576_G snp577_A snp578_T snp579_G snp580_C snp581_C snp582_T snp583_G
0 2 1 1 0 2 0 1
snp584_A snp585_G snp586_G snp587_G snp588_C snp589_C snp590_G snp591_C
1 0 2 2 2 2 0 1
snp592_G snp593_G snp594_G snp595_A snp596_A snp597_T snp598_T snp599_C
1 0 0 NA 1 1 0 2
snp600_A snp601_A snp602_A snp603_A snp604_G snp605_A snp606_G snp607_C
1 0 NA 1 0 0 1 1
snp608_C snp609_T snp610_C snp611_C snp612_G snp613_A snp614_T snp615_A
0 2 0 0 1 1 0 1
snp616_C snp617_G snp618_C snp619_G snp620_C snp621_C snp622_C snp623_C
1 1 0 2 1 0 0 0
snp624_A snp625_T snp626_T snp627_A snp628_T snp629_A snp630_C snp631_G
1 0 1 1 0 NA 0 1
snp632_T snp633_C snp634_A snp635_G snp636_G snp637_A snp638_A snp639_G
1 1 0 0 1 1 1 0
snp640_T snp641_T snp642_T snp643_G snp644_C snp645_G snp646_A snp647_T
2 2 1 2 2 1 0 0
snp648_G snp649_G snp650_G snp651_A snp652_C snp653_C snp654_T snp655_T
1 0 1 1 2 1 1 0
snp656_A snp657_G snp658_C snp659_T snp660_C snp661_T snp662_T snp663_A
2 2 2 1 1 1 0 1
snp664_A snp665_G snp666_G snp667_C snp668_T snp669_C snp670_C snp671_G
1 2 0 0 1 1 0 2
snp672_C snp673_A snp674_T snp675_C snp676_G snp677_C snp678_T snp679_T
0 1 1 1 0 1 0 1
snp680_T snp681_T snp682_G snp683_C snp684_A snp685_A snp686_G snp687_A
2 0 2 1 1 0 1 1
snp688_C snp689_C snp690_G snp691_G snp692_G snp693_G snp694_G snp695_G
0 NA 0 1 0 0 1 2
snp696_T snp697_C snp698_C snp699_G snp700_T snp701_C snp702_T snp703_T
1 0 2 0 1 0 0 0
snp704_T snp705_T snp706_G snp707_G snp708_A snp709_T snp710_T snp711_C
1 1 NA 1 0 0 0 1
snp712_T snp713_A snp714_G snp715_T snp716_A snp717_C snp718_G snp719_G
0 2 0 1 1 2 1 0
snp720_A snp721_G snp722_G snp723_A snp724_C snp725_G snp726_A snp727_A
NA 1 1 1 1 0 0 0
snp728_G snp729_T snp730_G snp731_A snp732_G snp733_T snp734_A snp735_G
0 2 0 0 1 1 0 0
snp736_G snp737_G snp738_T snp739_C snp740_A snp741_A snp742_G snp743_C
1 0 1 2 1 0 0 1
snp744_C snp745_T snp746_C snp747_G snp748_A snp749_A snp750_C snp751_C
2 2 2 2 1 0 0 0
snp752_A snp753_G snp754_G snp755_A snp756_T snp757_C snp758_C snp759_T
1 1 1 0 1 0 2 0
snp760_C snp761_T snp762_C snp763_T snp764_G snp765_A snp766_C snp767_C
0 2 1 2 0 2 1 1
snp768_C snp769_C snp770_C snp771_T snp772_T snp773_G snp774_A snp775_C
0 0 2 1 0 1 0 2
snp776_C snp777_A snp778_G snp779_T snp780_C snp781_T snp782_G snp783_C
0 0 0 2 1 2 1 1
snp784_A snp785_T snp786_G snp787_G snp788_C snp789_G snp790_G snp791_C
2 1 0 0 0 1 NA 2
snp792_T snp793_T snp794_C snp795_A snp796_T snp797_C snp798_T snp799_T
0 2 1 2 1 0 1 0
snp800_T snp801_A snp802_G snp803_T snp804_T snp805_G snp806_G snp807_A
1 1 1 1 1 0 2 1
snp808_G snp809_T snp810_G snp811_A snp812_C snp813_T snp814_T snp815_G
1 0 1 0 2 1 1 1
snp816_A snp817_T snp818_G snp819_A snp820_C snp821_A snp822_T snp823_G
1 0 1 0 0 1 2 1
snp824_C snp825_T snp826_A snp827_A snp828_G snp829_T snp830_T snp831_C
0 0 0 1 1 0 0 0
snp832_A snp833_C snp834_A snp835_G snp836_G snp837_A snp838_T snp839_T
2 1 1 1 1 1 1 2
snp840_C snp841_C snp842_A snp843_T snp844_G snp845_C snp846_A snp847_G
0 1 0 0 1 1 1 NA
snp848_G snp849_A snp850_G snp851_G snp852_G snp853_A snp854_A snp855_C
1 1 1 0 1 0 0 2
snp856_A snp857_T snp858_G snp859_A snp860_G snp861_T snp862_T snp863_C
1 0 0 1 1 0 0 1
snp864_G snp865_A snp866_G snp867_C snp868_T snp869_A snp870_A snp871_C
1 1 1 1 1 1 1 1
snp872_A snp873_T snp874_T snp875_C snp876_T snp877_G snp878_C snp879_G
0 2 2 0 1 0 0 0
snp880_G snp881_C snp882_T snp883_C snp884_G snp885_G snp886_G snp887_C
1 1 1 0 1 1 1 1
snp888_C snp889_T snp890_A snp891_T snp892_G snp893_T snp894_A snp895_C
1 2 1 0 0 1 0 1
snp896_G snp897_G snp898_T snp899_A snp900_C snp901_T snp902_G snp903_T
0 0 1 2 1 0 0 1
snp904_T snp905_C snp906_A snp907_C snp908_T snp909_T snp910_A snp911_T
1 0 2 1 2 NA 1 1
snp912_G snp913_T snp914_T snp915_A snp916_T snp917_C snp918_G snp919_C
2 2 0 1 0 1 0 1
snp920_G snp921_T snp922_G snp923_A snp924_C snp925_A snp926_T snp927_C
1 0 0 1 1 1 NA 1
snp928_G snp929_G snp930_A snp931_C snp932_T snp933_G snp934_G snp935_C
2 2 0 1 2 2 1 2
snp936_A snp937_T snp938_G snp939_C snp940_C snp941_T snp942_G snp943_G
2 1 1 0 1 1 2 1
snp944_T snp945_T snp946_A snp947_A snp948_A snp949_A snp950_C snp951_T
1 2 1 0 1 2 0 1
snp952_G snp953_G snp954_G snp955_A snp956_T snp957_T snp958_T snp959_G
1 2 1 1 1 1 2 0
snp960_T snp961_A snp962_C snp963_T snp964_A snp965_G snp966_A snp967_C
0 1 2 2 0 1 0 0
snp968_T snp969_A snp970_G snp971_C snp972_G snp973_A snp974_A snp975_G
0 1 1 1 0 2 1 1
snp976_T snp977_T snp978_A snp979_A snp980_A snp981_T snp982_T snp983_C
1 0 1 0 0 1 1 1
snp984_G snp985_C snp986_C snp987_C snp988_C snp989_T snp990_G snp991_A
2 0 1 1 1 2 1 1
snp992_T snp993_C snp994_T snp995_T snp996_G snp997_T snp998_C snp999_G
0 2 1 1 1 0 1 NA
snp0_A snp1_C snp2_G snp3_G snp4_G snp5_T snp6_G snp7_A snp8_A snp9_C
per0_per0 0 1 1 1 0 2 1 0 0 1
per1_per1 1 1 1 1 NA 2 2 2 1 1
per2_per2 1 0 0 2 0 0 1 2 0 1
snp10_A snp11_C snp12_A snp13_T snp14_A snp15_G snp16_A snp17_T
per0_per0 1 1 1 1 0 1 1 1
per1_per1 2 1 1 1 2 0 0 1
per2_per2 2 2 1 2 0 1 0 1
snp18_C snp19_G snp20_C snp21_G snp22_G snp23_C snp24_T snp25_A
per0_per0 0 1 1 2 0 NA 0 1
per1_per1 1 0 0 2 1 0 1 2
per2_per2 1 2 2 1 NA 0 1 2
snp26_G snp27_G snp28_T snp29_T snp30_T snp31_A snp32_T snp33_C
per0_per0 1 1 2 1 1 1 0 0
per1_per1 2 0 1 0 1 0 0 0
per2_per2 2 2 2 2 0 0 2 0
snp34_T snp35_A snp36_G snp37_G snp38_T snp39_C snp40_A snp41_C
per0_per0 1 1 1 2 0 0 2 1
per1_per1 1 1 0 1 2 1 1 0
per2_per2 0 1 1 1 1 2 0 1
snp42_T snp43_T snp44_T snp45_C snp46_C snp47_A snp48_C snp49_C
per0_per0 0 0 1 0 0 NA 2 2
per1_per1 1 1 1 0 2 1 1 1
per2_per2 1 2 0 1 1 1 0 0
snp50_T snp51_T snp52_A snp53_C snp54_T snp55_C snp56_C snp57_A
per0_per0 1 0 1 1 2 2 1 1
per1_per1 2 1 2 0 2 0 1 2
per2_per2 1 0 2 1 1 1 0 1
snp58_A snp59_G snp60_A snp61_A snp62_G snp63_G snp64_T snp65_G
per0_per0 1 1 2 2 1 2 0 1
per1_per1 0 0 2 1 0 1 2 1
per2_per2 1 1 0 2 1 1 0 1
snp66_C snp67_G snp68_A snp69_A snp70_C snp71_G snp72_A snp73_C
per0_per0 1 1 0 1 2 2 2 0
per1_per1 1 1 1 1 1 1 1 1
per2_per2 0 1 1 2 1 2 NA 0
snp74_G snp75_T snp76_C snp77_C snp78_C snp79_A snp80_C snp81_A
per0_per0 1 1 1 2 1 2 2 1
per1_per1 2 0 1 2 1 2 2 1
per2_per2 1 1 1 2 0 0 1 0
snp82_T snp83_G snp84_T snp85_T snp86_G snp87_A snp88_G snp89_G
per0_per0 0 1 0 1 1 2 2 1
per1_per1 1 1 0 1 1 0 2 1
per2_per2 0 2 2 0 0 0 2 1
snp90_C snp91_G snp92_T snp93_T snp94_T snp95_A snp96_C snp97_G
per0_per0 2 1 0 0 0 1 0 2
per1_per1 2 1 2 1 1 1 0 1
per2_per2 1 1 0 1 1 1 1 1
snp98_A snp99_T snp100_T snp101_T snp102_T snp103_G snp104_T snp105_C
per0_per0 2 2 2 0 NA 0 1 1
per1_per1 NA 1 2 0 1 1 2 0
per2_per2 0 1 1 2 2 2 1 2
snp106_T snp107_T snp108_T snp109_A snp110_A snp111_A snp112_G
per0_per0 1 1 0 0 0 1 0
per1_per1 1 1 1 1 1 2 1
per2_per2 2 0 1 0 1 0 1
snp113_G snp114_T snp115_T snp116_T snp117_T snp118_C snp119_T
per0_per0 0 0 2 1 0 1 1
per1_per1 0 1 1 0 0 0 0
per2_per2 1 2 2 0 1 1 1
snp120_C snp121_T snp122_C snp123_A snp124_T snp125_C snp126_C
per0_per0 0 1 0 1 NA NA 1
per1_per1 1 2 2 1 1 1 1
per2_per2 0 0 0 1 0 1 0
snp127_A snp128_A snp129_T snp130_T snp131_G snp132_A snp133_T
per0_per0 1 1 0 0 1 0 1
per1_per1 0 1 1 1 0 0 2
per2_per2 0 1 1 1 1 1 0
snp134_A snp135_G snp136_A snp137_G snp138_A snp139_G snp140_T
per0_per0 0 2 1 0 1 1 0
per1_per1 0 1 1 1 0 1 1
per2_per2 1 0 2 1 2 1 2
snp141_A snp142_T snp143_G snp144_A snp145_C snp146_C snp147_T
per0_per0 1 0 1 1 0 1 1
per1_per1 0 0 2 2 1 0 0
per2_per2 0 1 1 0 1 0 2
snp148_G snp149_A snp150_C snp151_C snp152_C snp153_G snp154_A
per0_per0 0 1 1 2 1 2 2
per1_per1 1 1 2 1 1 2 1
per2_per2 2 1 1 1 0 1 0
snp155_A snp156_A snp157_A snp158_T snp159_G snp160_C snp161_A
per0_per0 0 0 2 2 0 1 1
per1_per1 1 2 1 2 2 2 1
per2_per2 0 0 2 0 1 0 1
snp162_T snp163_A snp164_T snp165_G snp166_T snp167_T snp168_C
per0_per0 2 1 0 0 2 2 0
per1_per1 2 1 1 1 1 1 1
per2_per2 1 0 1 1 1 1 1
snp169_C snp170_A snp171_C snp172_G snp173_A snp174_A snp175_C
per0_per0 1 1 2 1 0 0 1
per1_per1 1 1 2 1 1 NA 1
per2_per2 2 0 0 2 1 1 0
snp176_T snp177_C snp178_A snp179_G snp180_A snp181_C snp182_A
per0_per0 1 0 0 2 0 0 1
per1_per1 0 NA 2 0 0 1 0
per2_per2 2 1 1 0 1 1 0
snp183_G snp184_T snp185_T snp186_T snp187_A snp188_G snp189_A
per0_per0 1 1 2 1 0 2 2
per1_per1 NA 1 1 0 1 1 1
per2_per2 0 1 1 1 1 0 0
snp190_C snp191_C snp192_C snp193_T snp194_A snp195_C snp196_T
per0_per0 1 1 1 1 1 1 0
per1_per1 1 0 1 2 1 2 2
per2_per2 1 1 0 1 1 2 2
snp197_T snp198_A snp199_T snp200_C snp201_C snp202_C snp203_G
per0_per0 0 1 0 2 1 1 0
per1_per1 0 1 2 2 0 2 1
per2_per2 1 1 2 1 2 2 0
snp204_G snp205_A snp206_T snp207_G snp208_G snp209_A snp210_A
per0_per0 1 1 NA 2 1 0 1
per1_per1 1 1 2 0 0 1 2
per2_per2 1 1 0 2 0 0 1
snp211_G snp212_T snp213_C snp214_A snp215_C snp216_G snp217_A
per0_per0 1 0 0 1 1 2 0
per1_per1 1 2 0 1 1 0 1
per2_per2 1 0 1 0 0 2 NA
snp218_G snp219_G snp220_G snp221_G snp222_A snp223_C snp224_T
per0_per0 0 1 0 1 1 1 1
per1_per1 1 2 2 1 2 0 2
per2_per2 1 1 0 0 NA 2 1
snp225_G snp226_C snp227_T snp228_T snp229_A snp230_G snp231_T
per0_per0 1 1 1 1 1 2 2
per1_per1 2 0 2 1 1 0 2
per2_per2 1 0 2 1 0 1 1
snp232_A snp233_A snp234_G snp235_A snp236_A snp237_C snp238_A
per0_per0 0 0 2 1 0 1 0
per1_per1 1 1 0 0 0 1 1
per2_per2 1 2 1 0 1 2 0
snp239_T snp240_C snp241_T snp242_T snp243_A snp244_C snp245_G
per0_per0 1 1 2 1 0 2 2
per1_per1 2 1 1 1 1 2 0
per2_per2 1 1 0 1 0 1 1
snp246_A snp247_T snp248_C snp249_T snp250_T snp251_C snp252_G
per0_per0 1 0 2 0 2 1 0
per1_per1 2 0 0 0 1 1 1
per2_per2 0 1 1 1 NA 1 1
snp253_A snp254_C snp255_A snp256_T snp257_G snp258_A snp259_G
per0_per0 1 2 0 1 1 1 1
per1_per1 1 2 0 1 0 1 2
per2_per2 0 2 0 1 1 2 1
snp260_C snp261_A snp262_A snp263_T snp264_T snp265_T snp266_A
per0_per0 1 1 1 1 1 2 0
per1_per1 0 2 0 1 1 1 0
per2_per2 1 0 1 1 2 2 1
snp267_G snp268_G snp269_T snp270_T snp271_G snp272_T snp273_T
per0_per0 0 1 1 2 0 0 0
per1_per1 1 1 NA 0 1 1 1
per2_per2 2 0 1 2 0 0 2
snp274_A snp275_G snp276_A snp277_T snp278_T snp279_G snp280_G
per0_per0 1 1 1 1 1 0 0
per1_per1 1 0 2 0 1 1 2
per2_per2 1 1 1 2 0 0 2
snp281_T snp282_A snp283_A snp284_C snp285_T snp286_T snp287_G
per0_per0 0 0 2 1 1 1 1
per1_per1 0 1 1 2 0 0 0
per2_per2 1 1 1 1 1 1 1
snp288_T snp289_A snp290_T snp291_T snp292_T snp293_G snp294_G
per0_per0 1 1 2 1 0 2 1
per1_per1 0 2 1 2 1 0 2
per2_per2 1 1 1 2 1 0 2
snp295_C snp296_T snp297_A snp298_C snp299_C snp300_C snp301_T
per0_per0 1 0 1 1 1 1 NA
per1_per1 1 0 0 2 2 1 1
per2_per2 1 1 1 1 2 2 1
snp302_A snp303_G snp304_C snp305_G snp306_C snp307_T snp308_C
per0_per0 1 0 2 0 1 0 1
per1_per1 0 0 0 0 1 1 1
per2_per2 1 2 1 1 1 1 0
snp309_A snp310_C snp311_G snp312_T snp313_T snp314_C snp315_A
per0_per0 1 2 0 1 1 1 2
per1_per1 1 2 1 1 0 1 1
per2_per2 1 1 1 1 1 0 0
snp316_C snp317_T snp318_T snp319_C snp320_C snp321_C snp322_T
per0_per0 0 1 1 1 1 0 1
per1_per1 1 1 2 1 0 0 0
per2_per2 1 1 1 0 1 2 1
snp323_A snp324_C snp325_A snp326_A snp327_A snp328_C snp329_G
per0_per0 2 1 1 0 1 2 0
per1_per1 2 2 0 1 0 1 1
per2_per2 0 1 1 2 0 1 1
snp330_G snp331_G snp332_G snp333_T snp334_A snp335_T snp336_A
per0_per0 0 2 1 2 2 2 0
per1_per1 0 1 0 2 0 1 0
per2_per2 1 1 NA 2 1 1 1
snp337_C snp338_C snp339_A snp340_G snp341_C snp342_T snp343_A
per0_per0 1 0 1 2 0 1 1
per1_per1 1 2 1 1 0 2 2
per2_per2 1 1 0 1 1 0 2
snp344_T snp345_G snp346_C snp347_T snp348_C snp349_C snp350_C
per0_per0 2 0 0 1 1 1 2
per1_per1 1 0 0 2 2 0 0
per2_per2 2 1 1 1 1 1 0
snp351_A snp352_A snp353_T snp354_G snp355_T snp356_T snp357_A
per0_per0 1 2 1 2 1 2 2
per1_per1 1 2 NA 0 2 2 0
per2_per2 0 1 NA 0 2 1 1
snp358_A snp359_A snp360_A snp361_G snp362_A snp363_G snp364_C
per0_per0 1 0 1 1 1 1 1
per1_per1 1 1 0 1 1 0 1
per2_per2 0 0 0 1 2 1 1
snp365_C snp366_A snp367_A snp368_C snp369_G snp370_T snp371_T
per0_per0 0 1 1 0 0 1 1
per1_per1 1 1 2 1 1 1 1
per2_per2 2 0 2 2 1 1 0
snp372_T snp373_G snp374_G snp375_T snp376_A snp377_G snp378_G
per0_per0 0 1 1 1 0 2 1
per1_per1 2 1 1 1 1 1 1
per2_per2 2 0 2 0 1 1 1
snp379_T snp380_A snp381_A snp382_T snp383_C snp384_A snp385_T
per0_per0 1 0 1 0 1 1 0
per1_per1 1 1 1 0 0 0 2
per2_per2 0 0 1 1 1 2 1
snp386_C snp387_A snp388_G snp389_C snp390_T snp391_A snp392_G
per0_per0 1 2 1 1 1 2 1
per1_per1 1 0 0 0 1 1 1
per2_per2 1 1 NA 1 2 1 1
snp393_C snp394_T snp395_G snp396_C snp397_T snp398_C snp399_T
per0_per0 2 0 0 1 2 0 2
per1_per1 0 0 2 1 2 2 2
per2_per2 0 1 1 0 2 0 1
snp400_A snp401_C snp402_T snp403_A snp404_C snp405_A snp406_G
per0_per0 1 2 1 0 1 0 1
per1_per1 1 0 1 2 2 0 2
per2_per2 1 0 0 1 1 1 0
snp407_A snp408_T snp409_G snp410_A snp411_G snp412_G snp413_C
per0_per0 0 2 1 1 1 1 0
per1_per1 1 1 2 2 2 1 2
per2_per2 1 2 1 2 1 1 NA
snp414_T snp415_A snp416_T snp417_A snp418_G snp419_C snp420_A
per0_per0 1 1 1 0 1 0 1
per1_per1 1 1 1 0 2 1 1
per2_per2 1 1 1 0 1 2 2
snp421_C snp422_G snp423_G snp424_C snp425_C snp426_G snp427_T
per0_per0 1 2 2 0 1 1 1
per1_per1 1 2 2 2 0 1 1
per2_per2 2 1 0 1 0 1 0
snp428_G snp429_T snp430_A snp431_A snp432_A snp433_A snp434_G
per0_per0 0 1 1 0 2 2 0
per1_per1 1 1 0 1 1 2 1
per2_per2 2 2 1 2 2 1 2
snp435_A snp436_A snp437_C snp438_T snp439_T snp440_C snp441_A
per0_per0 2 2 1 2 1 1 1
per1_per1 1 1 0 0 0 1 1
per2_per2 1 1 1 1 1 2 0
snp442_C snp443_C snp444_G snp445_T snp446_C snp447_A snp448_A
per0_per0 0 1 1 0 1 2 0
per1_per1 1 1 1 2 1 1 1
per2_per2 0 0 2 1 0 1 0
snp449_T snp450_A snp451_A snp452_A snp453_T snp454_T snp455_A
per0_per0 0 1 0 1 1 2 1
per1_per1 1 0 2 2 1 1 2
per2_per2 1 1 0 0 2 1 1
snp456_A snp457_C snp458_A snp459_A snp460_C snp461_A snp462_T
per0_per0 2 1 2 1 2 0 1
per1_per1 0 2 2 1 1 2 1
per2_per2 2 1 1 1 1 1 0
snp463_G snp464_T snp465_T snp466_A snp467_T snp468_C snp469_T
per0_per0 0 2 0 2 1 2 1
per1_per1 1 2 1 2 0 1 0
per2_per2 0 1 1 1 1 0 1
snp470_C snp471_G snp472_A snp473_C snp474_A snp475_A snp476_T
per0_per0 1 1 1 1 2 1 1
per1_per1 2 0 2 1 1 1 1
per2_per2 0 0 0 0 1 NA 1
snp477_C snp478_G snp479_A snp480_T snp481_G snp482_T snp483_C
per0_per0 1 0 1 1 0 1 1
per1_per1 2 NA 1 1 1 1 1
per2_per2 1 2 1 1 0 0 0
snp484_A snp485_G snp486_G snp487_T snp488_A snp489_C snp490_A
per0_per0 2 1 2 1 2 0 0
per1_per1 1 NA 2 1 0 2 0
per2_per2 1 0 1 0 1 0 1
snp491_A snp492_C snp493_C snp494_T snp495_A snp496_A snp497_A
per0_per0 1 2 0 1 1 1 1
per1_per1 1 2 0 1 1 0 2
per2_per2 1 1 1 2 1 1 0
snp498_T snp499_A snp500_T snp501_G snp502_A snp503_T snp504_G
per0_per0 1 2 1 0 0 1 1
per1_per1 2 1 1 1 0 2 0
per2_per2 0 0 1 0 2 2 1
snp505_T snp506_C snp507_C snp508_A snp509_C snp510_A snp511_A
per0_per0 0 0 1 1 1 1 1
per1_per1 0 1 2 1 1 2 0
per2_per2 0 1 1 1 2 1 1
snp512_G snp513_C snp514_C snp515_G snp516_A snp517_C snp518_G
per0_per0 0 2 1 1 2 2 2
per1_per1 1 1 1 1 1 1 1
per2_per2 1 1 0 1 NA 2 1
snp519_C snp520_C snp521_A snp522_A snp523_T snp524_A snp525_C
per0_per0 2 1 1 2 1 1 1
per1_per1 2 0 1 0 1 1 2
per2_per2 1 1 1 1 0 1 1
snp526_G snp527_A snp528_T snp529_C snp530_T snp531_C snp532_A
per0_per0 1 2 1 2 0 0 1
per1_per1 1 1 2 1 1 1 2
per2_per2 1 2 1 2 0 1 1
snp533_A snp534_C snp535_A snp536_A snp537_C snp538_T snp539_G
per0_per0 0 2 1 0 1 1 0
per1_per1 2 1 1 1 2 1 1
per2_per2 2 1 1 1 1 0 2
snp540_C snp541_G snp542_A snp543_G snp544_T snp545_C snp546_T
per0_per0 1 1 2 2 0 2 2
per1_per1 1 2 2 1 0 1 2
per2_per2 0 1 1 1 1 2 0
snp547_C snp548_C snp549_G snp550_A snp551_C snp552_A snp553_A
per0_per0 1 0 1 1 0 1 1
per1_per1 0 1 1 0 1 1 0
per2_per2 1 2 0 0 1 0 1
snp554_C snp555_G snp556_G snp557_C snp558_G snp559_G snp560_T
per0_per0 2 0 1 1 0 1 2
per1_per1 1 0 0 1 0 1 1
per2_per2 2 2 2 0 1 0 0
snp561_C snp562_T snp563_T snp564_G snp565_C snp566_T snp567_C
per0_per0 2 2 2 0 0 0 1
per1_per1 0 1 1 1 0 1 0
per2_per2 0 1 2 1 0 0 0
snp568_T snp569_T snp570_C snp571_A snp572_A snp573_A snp574_T
per0_per0 0 1 1 1 0 2 1
per1_per1 0 2 2 0 1 0 1
per2_per2 2 1 2 0 1 0 0
snp575_T snp576_G snp577_A snp578_T snp579_G snp580_C snp581_C
per0_per0 1 0 2 1 1 0 2
per1_per1 1 1 1 0 1 0 0
per2_per2 0 0 1 0 1 1 0
snp582_T snp583_G snp584_A snp585_G snp586_G snp587_G snp588_C
per0_per0 0 1 1 0 2 2 2
per1_per1 1 0 1 1 1 1 1
per2_per2 2 1 1 0 1 0 1
snp589_C snp590_G snp591_C snp592_G snp593_G snp594_G snp595_A
per0_per0 2 0 1 1 0 0 NA
per1_per1 2 2 1 1 1 2 1
per2_per2 2 0 0 1 0 0 2
snp596_A snp597_T snp598_T snp599_C snp600_A snp601_A snp602_A
per0_per0 1 1 0 2 1 0 NA
per1_per1 1 2 0 0 1 1 2
per2_per2 1 1 2 1 0 1 0
snp603_A snp604_G snp605_A snp606_G snp607_C snp608_C snp609_T
per0_per0 1 0 0 1 1 0 2
per1_per1 1 0 1 1 2 1 2
per2_per2 2 1 0 1 1 NA 0
snp610_C snp611_C snp612_G snp613_A snp614_T snp615_A snp616_C
per0_per0 0 0 1 1 0 1 1
per1_per1 2 1 1 0 1 1 0
per2_per2 1 1 0 2 0 1 2
snp617_G snp618_C snp619_G snp620_C snp621_C snp622_C snp623_C
per0_per0 1 0 2 1 0 0 0
per1_per1 1 2 1 2 0 1 0
per2_per2 2 2 1 2 0 1 1
snp624_A snp625_T snp626_T snp627_A snp628_T snp629_A snp630_C
per0_per0 1 0 1 1 0 NA 0
per1_per1 1 0 1 1 1 1 1
per2_per2 1 1 0 1 0 1 0
snp631_G snp632_T snp633_C snp634_A snp635_G snp636_G snp637_A
per0_per0 1 1 1 0 0 1 1
per1_per1 1 2 2 1 0 1 NA
per2_per2 2 1 1 1 0 NA 0
snp638_A snp639_G snp640_T snp641_T snp642_T snp643_G snp644_C
per0_per0 1 0 2 2 1 2 2
per1_per1 1 1 1 0 1 1 1
per2_per2 1 2 0 2 1 2 0
snp645_G snp646_A snp647_T snp648_G snp649_G snp650_G snp651_A
per0_per0 1 0 0 1 0 1 1
per1_per1 1 2 0 0 1 1 2
per2_per2 2 1 1 1 1 1 0
snp652_C snp653_C snp654_T snp655_T snp656_A snp657_G snp658_C
per0_per0 2 1 1 0 2 2 2
per1_per1 1 2 1 1 1 2 2
per2_per2 0 0 1 1 2 1 0
snp659_T snp660_C snp661_T snp662_T snp663_A snp664_A snp665_G
per0_per0 1 1 1 0 1 1 2
per1_per1 1 0 0 1 1 NA 1
per2_per2 2 0 1 0 1 1 1
snp666_G snp667_C snp668_T snp669_C snp670_C snp671_G snp672_C
per0_per0 0 0 1 1 0 2 0
per1_per1 2 2 1 0 1 1 1
per2_per2 0 1 2 1 1 2 0
snp673_A snp674_T snp675_C snp676_G snp677_C snp678_T snp679_T
per0_per0 1 1 1 0 1 0 1
per1_per1 0 1 1 0 0 1 1
per2_per2 1 1 1 1 0 1 1
snp680_T snp681_T snp682_G snp683_C snp684_A snp685_A snp686_G
per0_per0 2 0 2 1 1 0 1
per1_per1 1 2 1 1 0 1 0
per2_per2 1 1 1 2 1 1 2
snp687_A snp688_C snp689_C snp690_G snp691_G snp692_G snp693_G
per0_per0 1 0 NA 0 1 0 0
per1_per1 0 0 2 0 1 2 1
per2_per2 1 1 0 0 1 0 1
snp694_G snp695_G snp696_T snp697_C snp698_C snp699_G snp700_T
per0_per0 1 2 1 0 2 0 1
per1_per1 2 1 2 1 2 1 0
per2_per2 0 2 2 1 0 2 NA
snp701_C snp702_T snp703_T snp704_T snp705_T snp706_G snp707_G
per0_per0 0 0 0 1 1 NA 1
per1_per1 2 1 2 1 0 1 1
per2_per2 0 0 1 0 0 0 0
snp708_A snp709_T snp710_T snp711_C snp712_T snp713_A snp714_G
per0_per0 0 0 0 1 0 2 0
per1_per1 0 1 0 NA 1 2 1
per2_per2 0 1 1 2 NA 0 0
snp715_T snp716_A snp717_C snp718_G snp719_G snp720_A snp721_G
per0_per0 1 1 2 1 0 NA 1
per1_per1 2 1 2 0 1 1 0
per2_per2 1 1 1 2 1 1 0
snp722_G snp723_A snp724_C snp725_G snp726_A snp727_A snp728_G
per0_per0 1 1 1 0 0 0 0
per1_per1 2 1 2 1 1 1 1
per2_per2 1 1 1 1 1 0 1
snp729_T snp730_G snp731_A snp732_G snp733_T snp734_A snp735_G
per0_per0 2 0 0 1 1 0 0
per1_per1 2 2 1 1 2 0 2
per2_per2 2 1 2 1 1 2 1
snp736_G snp737_G snp738_T snp739_C snp740_A snp741_A snp742_G
per0_per0 1 0 1 2 1 0 0
per1_per1 0 0 2 0 1 0 1
per2_per2 NA 1 1 2 0 2 0
snp743_C snp744_C snp745_T snp746_C snp747_G snp748_A snp749_A
per0_per0 1 2 2 2 2 1 0
per1_per1 1 1 1 1 2 1 1
per2_per2 2 0 1 1 1 NA 2
snp750_C snp751_C snp752_A snp753_G snp754_G snp755_A snp756_T
per0_per0 0 0 1 1 1 0 1
per1_per1 2 1 1 1 0 0 1
per2_per2 1 0 2 1 1 1 0
snp757_C snp758_C snp759_T snp760_C snp761_T snp762_C snp763_T
per0_per0 0 2 0 0 2 1 2
per1_per1 0 0 0 1 0 1 2
per2_per2 2 0 2 0 2 0 1
snp764_G snp765_A snp766_C snp767_C snp768_C snp769_C snp770_C
per0_per0 0 2 1 1 0 0 2
per1_per1 NA 0 0 1 1 0 0
per2_per2 2 0 2 0 0 2 NA
snp771_T snp772_T snp773_G snp774_A snp775_C snp776_C snp777_A
per0_per0 1 0 1 0 2 0 0
per1_per1 1 0 1 0 2 0 0
per2_per2 1 0 0 2 1 1 1
snp778_G snp779_T snp780_C snp781_T snp782_G snp783_C snp784_A
per0_per0 0 2 1 2 1 1 2
per1_per1 1 1 1 1 1 0 0
per2_per2 2 1 1 1 0 1 0
snp785_T snp786_G snp787_G snp788_C snp789_G snp790_G snp791_C
per0_per0 1 0 0 0 1 NA 2
per1_per1 1 0 2 1 1 1 0
per2_per2 0 0 0 1 1 2 2
snp792_T snp793_T snp794_C snp795_A snp796_T snp797_C snp798_T
per0_per0 0 2 1 2 1 0 1
per1_per1 0 1 1 1 2 1 1
per2_per2 0 1 0 0 1 1 1
snp799_T snp800_T snp801_A snp802_G snp803_T snp804_T snp805_G
per0_per0 0 1 1 1 1 1 0
per1_per1 1 1 1 0 1 0 2
per2_per2 1 1 1 0 2 1 0
snp806_G snp807_A snp808_G snp809_T snp810_G snp811_A snp812_C
per0_per0 2 1 1 0 1 0 2
per1_per1 2 2 1 1 2 1 0
per2_per2 1 0 2 1 1 1 2
snp813_T snp814_T snp815_G snp816_A snp817_T snp818_G snp819_A
per0_per0 1 1 1 1 0 1 0
per1_per1 2 2 1 0 1 1 2
per2_per2 0 0 2 1 0 1 0
snp820_C snp821_A snp822_T snp823_G snp824_C snp825_T snp826_A
per0_per0 0 1 2 1 0 0 0
per1_per1 2 1 0 1 2 1 0
per2_per2 0 1 1 0 0 1 1
snp827_A snp828_G snp829_T snp830_T snp831_C snp832_A snp833_C
per0_per0 1 1 0 0 0 2 1
per1_per1 0 0 1 1 0 0 0
per2_per2 1 1 0 0 0 2 1
snp834_A snp835_G snp836_G snp837_A snp838_T snp839_T snp840_C
per0_per0 1 1 1 1 1 2 0
per1_per1 1 2 1 0 1 0 0
per2_per2 0 1 2 1 1 1 1
snp841_C snp842_A snp843_T snp844_G snp845_C snp846_A snp847_G
per0_per0 1 0 0 1 1 1 NA
per1_per1 2 1 2 0 0 1 1
per2_per2 0 0 0 1 1 0 1
snp848_G snp849_A snp850_G snp851_G snp852_G snp853_A snp854_A
per0_per0 1 1 1 0 1 0 0
per1_per1 0 1 1 0 1 0 0
per2_per2 0 2 2 2 1 1 0
snp855_C snp856_A snp857_T snp858_G snp859_A snp860_G snp861_T
per0_per0 2 1 0 0 1 1 0
per1_per1 1 2 2 1 1 NA 1
per2_per2 1 1 1 0 1 2 0
snp862_T snp863_C snp864_G snp865_A snp866_G snp867_C snp868_T
per0_per0 0 1 1 1 1 1 1
per1_per1 2 2 1 0 2 2 2
per2_per2 1 1 2 0 1 0 1
snp869_A snp870_A snp871_C snp872_A snp873_T snp874_T snp875_C
per0_per0 1 1 1 0 2 2 0
per1_per1 0 1 0 2 1 1 NA
per2_per2 2 0 2 1 1 2 0
snp876_T snp877_G snp878_C snp879_G snp880_G snp881_C snp882_T
per0_per0 1 0 0 0 1 1 1
per1_per1 1 1 1 1 1 0 0
per2_per2 1 2 2 2 0 1 0
snp883_C snp884_G snp885_G snp886_G snp887_C snp888_C snp889_T
per0_per0 0 1 1 1 1 1 2
per1_per1 1 2 2 0 0 0 1
per2_per2 0 1 1 1 1 NA 0
snp890_A snp891_T snp892_G snp893_T snp894_A snp895_C snp896_G
per0_per0 1 0 0 1 0 1 0
per1_per1 0 1 2 1 1 1 0
per2_per2 1 0 0 1 1 0 1
snp897_G snp898_T snp899_A snp900_C snp901_T snp902_G snp903_T
per0_per0 0 1 2 1 0 0 1
per1_per1 0 1 1 1 1 1 0
per2_per2 1 1 1 1 2 0 2
snp904_T snp905_C snp906_A snp907_C snp908_T snp909_T snp910_A
per0_per0 1 0 2 1 2 NA 1
per1_per1 2 1 2 2 1 1 NA
per2_per2 2 1 0 1 2 0 2
snp911_T snp912_G snp913_T snp914_T snp915_A snp916_T snp917_C
per0_per0 1 2 2 0 1 0 1
per1_per1 0 2 1 1 1 1 0
per2_per2 0 0 1 2 1 1 2
snp918_G snp919_C snp920_G snp921_T snp922_G snp923_A snp924_C
per0_per0 0 1 1 0 0 1 1
per1_per1 2 0 2 2 2 1 1
per2_per2 1 1 1 2 0 1 0
snp925_A snp926_T snp927_C snp928_G snp929_G snp930_A snp931_C
per0_per0 1 NA 1 2 2 0 1
per1_per1 0 1 0 0 0 1 1
per2_per2 0 1 2 1 0 1 2
snp932_T snp933_G snp934_G snp935_C snp936_A snp937_T snp938_G
per0_per0 2 2 1 2 2 1 1
per1_per1 0 2 0 0 1 1 1
per2_per2 2 0 1 1 1 1 1
snp939_C snp940_C snp941_T snp942_G snp943_G snp944_T snp945_T
per0_per0 0 1 1 2 1 1 2
per1_per1 0 0 1 2 1 2 1
per2_per2 1 1 1 1 2 1 1
snp946_A snp947_A snp948_A snp949_A snp950_C snp951_T snp952_G
per0_per0 1 0 1 2 0 1 1
per1_per1 1 1 1 1 0 1 1
per2_per2 1 2 1 0 1 0 2
snp953_G snp954_G snp955_A snp956_T snp957_T snp958_T snp959_G
per0_per0 2 1 1 1 1 2 0
per1_per1 1 1 0 0 2 1 1
per2_per2 0 1 0 1 0 0 1
snp960_T snp961_A snp962_C snp963_T snp964_A snp965_G snp966_A
per0_per0 0 1 2 2 0 1 0
per1_per1 2 1 2 1 1 0 1
per2_per2 1 2 1 0 1 1 2
snp967_C snp968_T snp969_A snp970_G snp971_C snp972_G snp973_A
per0_per0 0 0 1 1 1 0 2
per1_per1 1 2 1 1 0 1 0
per2_per2 2 1 0 1 0 1 0
snp974_A snp975_G snp976_T snp977_T snp978_A snp979_A snp980_A
per0_per0 1 1 1 0 1 0 0
per1_per1 1 1 0 1 1 1 1
per2_per2 0 2 0 1 1 1 0
snp981_T snp982_T snp983_C snp984_G snp985_C snp986_C snp987_C
per0_per0 1 1 1 2 0 1 1
per1_per1 0 1 1 1 0 0 0
per2_per2 2 2 0 1 2 1 2
snp988_C snp989_T snp990_G snp991_A snp992_T snp993_C snp994_T
per0_per0 1 2 1 1 0 2 1
per1_per1 1 1 0 1 1 1 1
per2_per2 0 1 1 1 2 1 0
snp995_T snp996_G snp997_T snp998_C snp999_G
per0_per0 1 1 0 1 NA
per1_per1 1 1 1 0 1
per2_per2 1 0 2 0 2
snp0_A snp1_C snp2_G snp3_G snp4_G snp5_T snp6_G snp7_A
0 1 1 1 0 2 1 0
snp8_A snp9_C snp10_A snp11_C snp12_A snp13_T snp14_A snp15_G
0 1 1 1 1 1 0 1
snp16_A snp17_T snp18_C snp19_G snp20_C snp21_G snp22_G snp23_C
1 1 0 1 1 2 0 NA
snp24_T snp25_A snp26_G snp27_G snp28_T snp29_T snp30_T snp31_A
0 1 1 1 2 1 1 1
snp32_T snp33_C snp34_T snp35_A snp36_G snp37_G snp38_T snp39_C
0 0 1 1 1 2 0 0
snp40_A snp41_C snp42_T snp43_T snp44_T snp45_C snp46_C snp47_A
2 1 0 0 1 0 0 NA
snp48_C snp49_C snp50_T snp51_T snp52_A snp53_C snp54_T snp55_C
2 2 1 0 1 1 2 2
snp56_C snp57_A snp58_A snp59_G snp60_A snp61_A snp62_G snp63_G
1 1 1 1 2 2 1 2
snp64_T snp65_G snp66_C snp67_G snp68_A snp69_A snp70_C snp71_G
0 1 1 1 0 1 2 2
snp72_A snp73_C snp74_G snp75_T snp76_C snp77_C snp78_C snp79_A
2 0 1 1 1 2 1 2
snp80_C snp81_A snp82_T snp83_G snp84_T snp85_T snp86_G snp87_A
2 1 0 1 0 1 1 2
snp88_G snp89_G snp90_C snp91_G snp92_T snp93_T snp94_T snp95_A
2 1 2 1 0 0 0 1
snp96_C snp97_G snp98_A snp99_T snp100_T snp101_T snp102_T snp103_G
0 2 2 2 2 0 NA 0
snp104_T snp105_C snp106_T snp107_T snp108_T snp109_A snp110_A snp111_A
1 1 1 1 0 0 0 1
snp112_G snp113_G snp114_T snp115_T snp116_T snp117_T snp118_C snp119_T
0 0 0 2 1 0 1 1
snp120_C snp121_T snp122_C snp123_A snp124_T snp125_C snp126_C snp127_A
0 1 0 1 NA NA 1 1
snp128_A snp129_T snp130_T snp131_G snp132_A snp133_T snp134_A snp135_G
1 0 0 1 0 1 0 2
snp136_A snp137_G snp138_A snp139_G snp140_T snp141_A snp142_T snp143_G
1 0 1 1 0 1 0 1
snp144_A snp145_C snp146_C snp147_T snp148_G snp149_A snp150_C snp151_C
1 0 1 1 0 1 1 2
snp152_C snp153_G snp154_A snp155_A snp156_A snp157_A snp158_T snp159_G
1 2 2 0 0 2 2 0
snp160_C snp161_A snp162_T snp163_A snp164_T snp165_G snp166_T snp167_T
1 1 2 1 0 0 2 2
snp168_C snp169_C snp170_A snp171_C snp172_G snp173_A snp174_A snp175_C
0 1 1 2 1 0 0 1
snp176_T snp177_C snp178_A snp179_G snp180_A snp181_C snp182_A snp183_G
1 0 0 2 0 0 1 1
snp184_T snp185_T snp186_T snp187_A snp188_G snp189_A snp190_C snp191_C
1 2 1 0 2 2 1 1
snp192_C snp193_T snp194_A snp195_C snp196_T snp197_T snp198_A snp199_T
1 1 1 1 0 0 1 0
snp200_C snp201_C snp202_C snp203_G snp204_G snp205_A snp206_T snp207_G
2 1 1 0 1 1 NA 2
snp208_G snp209_A snp210_A snp211_G snp212_T snp213_C snp214_A snp215_C
1 0 1 1 0 0 1 1
snp216_G snp217_A snp218_G snp219_G snp220_G snp221_G snp222_A snp223_C
2 0 0 1 0 1 1 1
snp224_T snp225_G snp226_C snp227_T snp228_T snp229_A snp230_G snp231_T
1 1 1 1 1 1 2 2
snp232_A snp233_A snp234_G snp235_A snp236_A snp237_C snp238_A snp239_T
0 0 2 1 0 1 0 1
snp240_C snp241_T snp242_T snp243_A snp244_C snp245_G snp246_A snp247_T
1 2 1 0 2 2 1 0
snp248_C snp249_T snp250_T snp251_C snp252_G snp253_A snp254_C snp255_A
2 0 2 1 0 1 2 0
snp256_T snp257_G snp258_A snp259_G snp260_C snp261_A snp262_A snp263_T
1 1 1 1 1 1 1 1
snp264_T snp265_T snp266_A snp267_G snp268_G snp269_T snp270_T snp271_G
1 2 0 0 1 1 2 0
snp272_T snp273_T snp274_A snp275_G snp276_A snp277_T snp278_T snp279_G
0 0 1 1 1 1 1 0
snp280_G snp281_T snp282_A snp283_A snp284_C snp285_T snp286_T snp287_G
0 0 0 2 1 1 1 1
snp288_T snp289_A snp290_T snp291_T snp292_T snp293_G snp294_G snp295_C
1 1 2 1 0 2 1 1
snp296_T snp297_A snp298_C snp299_C snp300_C snp301_T snp302_A snp303_G
0 1 1 1 1 NA 1 0
snp304_C snp305_G snp306_C snp307_T snp308_C snp309_A snp310_C snp311_G
2 0 1 0 1 1 2 0
snp312_T snp313_T snp314_C snp315_A snp316_C snp317_T snp318_T snp319_C
1 1 1 2 0 1 1 1
snp320_C snp321_C snp322_T snp323_A snp324_C snp325_A snp326_A snp327_A
1 0 1 2 1 1 0 1
snp328_C snp329_G snp330_G snp331_G snp332_G snp333_T snp334_A snp335_T
2 0 0 2 1 2 2 2
snp336_A snp337_C snp338_C snp339_A snp340_G snp341_C snp342_T snp343_A
0 1 0 1 2 0 1 1
snp344_T snp345_G snp346_C snp347_T snp348_C snp349_C snp350_C snp351_A
2 0 0 1 1 1 2 1
snp352_A snp353_T snp354_G snp355_T snp356_T snp357_A snp358_A snp359_A
2 1 2 1 2 2 1 0
snp360_A snp361_G snp362_A snp363_G snp364_C snp365_C snp366_A snp367_A
1 1 1 1 1 0 1 1
snp368_C snp369_G snp370_T snp371_T snp372_T snp373_G snp374_G snp375_T
0 0 1 1 0 1 1 1
snp376_A snp377_G snp378_G snp379_T snp380_A snp381_A snp382_T snp383_C
0 2 1 1 0 1 0 1
snp384_A snp385_T snp386_C snp387_A snp388_G snp389_C snp390_T snp391_A
1 0 1 2 1 1 1 2
snp392_G snp393_C snp394_T snp395_G snp396_C snp397_T snp398_C snp399_T
1 2 0 0 1 2 0 2
snp400_A snp401_C snp402_T snp403_A snp404_C snp405_A snp406_G snp407_A
1 2 1 0 1 0 1 0
snp408_T snp409_G snp410_A snp411_G snp412_G snp413_C snp414_T snp415_A
2 1 1 1 1 0 1 1
snp416_T snp417_A snp418_G snp419_C snp420_A snp421_C snp422_G snp423_G
1 0 1 0 1 1 2 2
snp424_C snp425_C snp426_G snp427_T snp428_G snp429_T snp430_A snp431_A
0 1 1 1 0 1 1 0
snp432_A snp433_A snp434_G snp435_A snp436_A snp437_C snp438_T snp439_T
2 2 0 2 2 1 2 1
snp440_C snp441_A snp442_C snp443_C snp444_G snp445_T snp446_C snp447_A
1 1 0 1 1 0 1 2
snp448_A snp449_T snp450_A snp451_A snp452_A snp453_T snp454_T snp455_A
0 0 1 0 1 1 2 1
snp456_A snp457_C snp458_A snp459_A snp460_C snp461_A snp462_T snp463_G
2 1 2 1 2 0 1 0
snp464_T snp465_T snp466_A snp467_T snp468_C snp469_T snp470_C snp471_G
2 0 2 1 2 1 1 1
snp472_A snp473_C snp474_A snp475_A snp476_T snp477_C snp478_G snp479_A
1 1 2 1 1 1 0 1
snp480_T snp481_G snp482_T snp483_C snp484_A snp485_G snp486_G snp487_T
1 0 1 1 2 1 2 1
snp488_A snp489_C snp490_A snp491_A snp492_C snp493_C snp494_T snp495_A
2 0 0 1 2 0 1 1
snp496_A snp497_A snp498_T snp499_A snp500_T snp501_G snp502_A snp503_T
1 1 1 2 1 0 0 1
snp504_G snp505_T snp506_C snp507_C snp508_A snp509_C snp510_A snp511_A
1 0 0 1 1 1 1 1
snp512_G snp513_C snp514_C snp515_G snp516_A snp517_C snp518_G snp519_C
0 2 1 1 2 2 2 2
snp520_C snp521_A snp522_A snp523_T snp524_A snp525_C snp526_G snp527_A
1 1 2 1 1 1 1 2
snp528_T snp529_C snp530_T snp531_C snp532_A snp533_A snp534_C snp535_A
1 2 0 0 1 0 2 1
snp536_A snp537_C snp538_T snp539_G snp540_C snp541_G snp542_A snp543_G
0 1 1 0 1 1 2 2
snp544_T snp545_C snp546_T snp547_C snp548_C snp549_G snp550_A snp551_C
0 2 2 1 0 1 1 0
snp552_A snp553_A snp554_C snp555_G snp556_G snp557_C snp558_G snp559_G
1 1 2 0 1 1 0 1
snp560_T snp561_C snp562_T snp563_T snp564_G snp565_C snp566_T snp567_C
2 2 2 2 0 0 0 1
snp568_T snp569_T snp570_C snp571_A snp572_A snp573_A snp574_T snp575_T
0 1 1 1 0 2 1 1
snp576_G snp577_A snp578_T snp579_G snp580_C snp581_C snp582_T snp583_G
0 2 1 1 0 2 0 1
snp584_A snp585_G snp586_G snp587_G snp588_C snp589_C snp590_G snp591_C
1 0 2 2 2 2 0 1
snp592_G snp593_G snp594_G snp595_A snp596_A snp597_T snp598_T snp599_C
1 0 0 NA 1 1 0 2
snp600_A snp601_A snp602_A snp603_A snp604_G snp605_A snp606_G snp607_C
1 0 NA 1 0 0 1 1
snp608_C snp609_T snp610_C snp611_C snp612_G snp613_A snp614_T snp615_A
0 2 0 0 1 1 0 1
snp616_C snp617_G snp618_C snp619_G snp620_C snp621_C snp622_C snp623_C
1 1 0 2 1 0 0 0
snp624_A snp625_T snp626_T snp627_A snp628_T snp629_A snp630_C snp631_G
1 0 1 1 0 NA 0 1
snp632_T snp633_C snp634_A snp635_G snp636_G snp637_A snp638_A snp639_G
1 1 0 0 1 1 1 0
snp640_T snp641_T snp642_T snp643_G snp644_C snp645_G snp646_A snp647_T
2 2 1 2 2 1 0 0
snp648_G snp649_G snp650_G snp651_A snp652_C snp653_C snp654_T snp655_T
1 0 1 1 2 1 1 0
snp656_A snp657_G snp658_C snp659_T snp660_C snp661_T snp662_T snp663_A
2 2 2 1 1 1 0 1
snp664_A snp665_G snp666_G snp667_C snp668_T snp669_C snp670_C snp671_G
1 2 0 0 1 1 0 2
snp672_C snp673_A snp674_T snp675_C snp676_G snp677_C snp678_T snp679_T
0 1 1 1 0 1 0 1
snp680_T snp681_T snp682_G snp683_C snp684_A snp685_A snp686_G snp687_A
2 0 2 1 1 0 1 1
snp688_C snp689_C snp690_G snp691_G snp692_G snp693_G snp694_G snp695_G
0 NA 0 1 0 0 1 2
snp696_T snp697_C snp698_C snp699_G snp700_T snp701_C snp702_T snp703_T
1 0 2 0 1 0 0 0
snp704_T snp705_T snp706_G snp707_G snp708_A snp709_T snp710_T snp711_C
1 1 NA 1 0 0 0 1
snp712_T snp713_A snp714_G snp715_T snp716_A snp717_C snp718_G snp719_G
0 2 0 1 1 2 1 0
snp720_A snp721_G snp722_G snp723_A snp724_C snp725_G snp726_A snp727_A
NA 1 1 1 1 0 0 0
snp728_G snp729_T snp730_G snp731_A snp732_G snp733_T snp734_A snp735_G
0 2 0 0 1 1 0 0
snp736_G snp737_G snp738_T snp739_C snp740_A snp741_A snp742_G snp743_C
1 0 1 2 1 0 0 1
snp744_C snp745_T snp746_C snp747_G snp748_A snp749_A snp750_C snp751_C
2 2 2 2 1 0 0 0
snp752_A snp753_G snp754_G snp755_A snp756_T snp757_C snp758_C snp759_T
1 1 1 0 1 0 2 0
snp760_C snp761_T snp762_C snp763_T snp764_G snp765_A snp766_C snp767_C
0 2 1 2 0 2 1 1
snp768_C snp769_C snp770_C snp771_T snp772_T snp773_G snp774_A snp775_C
0 0 2 1 0 1 0 2
snp776_C snp777_A snp778_G snp779_T snp780_C snp781_T snp782_G snp783_C
0 0 0 2 1 2 1 1
snp784_A snp785_T snp786_G snp787_G snp788_C snp789_G snp790_G snp791_C
2 1 0 0 0 1 NA 2
snp792_T snp793_T snp794_C snp795_A snp796_T snp797_C snp798_T snp799_T
0 2 1 2 1 0 1 0
snp800_T snp801_A snp802_G snp803_T snp804_T snp805_G snp806_G snp807_A
1 1 1 1 1 0 2 1
snp808_G snp809_T snp810_G snp811_A snp812_C snp813_T snp814_T snp815_G
1 0 1 0 2 1 1 1
snp816_A snp817_T snp818_G snp819_A snp820_C snp821_A snp822_T snp823_G
1 0 1 0 0 1 2 1
snp824_C snp825_T snp826_A snp827_A snp828_G snp829_T snp830_T snp831_C
0 0 0 1 1 0 0 0
snp832_A snp833_C snp834_A snp835_G snp836_G snp837_A snp838_T snp839_T
2 1 1 1 1 1 1 2
snp840_C snp841_C snp842_A snp843_T snp844_G snp845_C snp846_A snp847_G
0 1 0 0 1 1 1 NA
snp848_G snp849_A snp850_G snp851_G snp852_G snp853_A snp854_A snp855_C
1 1 1 0 1 0 0 2
snp856_A snp857_T snp858_G snp859_A snp860_G snp861_T snp862_T snp863_C
1 0 0 1 1 0 0 1
snp864_G snp865_A snp866_G snp867_C snp868_T snp869_A snp870_A snp871_C
1 1 1 1 1 1 1 1
snp872_A snp873_T snp874_T snp875_C snp876_T snp877_G snp878_C snp879_G
0 2 2 0 1 0 0 0
snp880_G snp881_C snp882_T snp883_C snp884_G snp885_G snp886_G snp887_C
1 1 1 0 1 1 1 1
snp888_C snp889_T snp890_A snp891_T snp892_G snp893_T snp894_A snp895_C
1 2 1 0 0 1 0 1
snp896_G snp897_G snp898_T snp899_A snp900_C snp901_T snp902_G snp903_T
0 0 1 2 1 0 0 1
snp904_T snp905_C snp906_A snp907_C snp908_T snp909_T snp910_A snp911_T
1 0 2 1 2 NA 1 1
snp912_G snp913_T snp914_T snp915_A snp916_T snp917_C snp918_G snp919_C
2 2 0 1 0 1 0 1
snp920_G snp921_T snp922_G snp923_A snp924_C snp925_A snp926_T snp927_C
1 0 0 1 1 1 NA 1
snp928_G snp929_G snp930_A snp931_C snp932_T snp933_G snp934_G snp935_C
2 2 0 1 2 2 1 2
snp936_A snp937_T snp938_G snp939_C snp940_C snp941_T snp942_G snp943_G
2 1 1 0 1 1 2 1
snp944_T snp945_T snp946_A snp947_A snp948_A snp949_A snp950_C snp951_T
1 2 1 0 1 2 0 1
snp952_G snp953_G snp954_G snp955_A snp956_T snp957_T snp958_T snp959_G
1 2 1 1 1 1 2 0
snp960_T snp961_A snp962_C snp963_T snp964_A snp965_G snp966_A snp967_C
0 1 2 2 0 1 0 0
snp968_T snp969_A snp970_G snp971_C snp972_G snp973_A snp974_A snp975_G
0 1 1 1 0 2 1 1
snp976_T snp977_T snp978_A snp979_A snp980_A snp981_T snp982_T snp983_C
1 0 1 0 0 1 1 1
snp984_G snp985_C snp986_C snp987_C snp988_C snp989_T snp990_G snp991_A
2 0 1 1 1 2 1 1
snp992_T snp993_C snp994_T snp995_T snp996_G snp997_T snp998_C snp999_G
0 2 1 1 1 0 1 NA
snp0_A snp1_C snp2_G snp3_G snp4_G snp5_T snp6_G snp7_A snp8_A snp9_C
per0_per0 0 1 1 1 0 2 1 0 0 1
per1_per1 1 1 1 1 NA 2 2 2 1 1
per2_per2 1 0 0 2 0 0 1 2 0 1
snp10_A snp11_C snp12_A snp13_T snp14_A snp15_G snp16_A snp17_T
per0_per0 1 1 1 1 0 1 1 1
per1_per1 2 1 1 1 2 0 0 1
per2_per2 2 2 1 2 0 1 0 1
snp18_C snp19_G snp20_C snp21_G snp22_G snp23_C snp24_T snp25_A
per0_per0 0 1 1 2 0 NA 0 1
per1_per1 1 0 0 2 1 0 1 2
per2_per2 1 2 2 1 NA 0 1 2
snp26_G snp27_G snp28_T snp29_T snp30_T snp31_A snp32_T snp33_C
per0_per0 1 1 2 1 1 1 0 0
per1_per1 2 0 1 0 1 0 0 0
per2_per2 2 2 2 2 0 0 2 0
snp34_T snp35_A snp36_G snp37_G snp38_T snp39_C snp40_A snp41_C
per0_per0 1 1 1 2 0 0 2 1
per1_per1 1 1 0 1 2 1 1 0
per2_per2 0 1 1 1 1 2 0 1
snp42_T snp43_T snp44_T snp45_C snp46_C snp47_A snp48_C snp49_C
per0_per0 0 0 1 0 0 NA 2 2
per1_per1 1 1 1 0 2 1 1 1
per2_per2 1 2 0 1 1 1 0 0
snp50_T snp51_T snp52_A snp53_C snp54_T snp55_C snp56_C snp57_A
per0_per0 1 0 1 1 2 2 1 1
per1_per1 2 1 2 0 2 0 1 2
per2_per2 1 0 2 1 1 1 0 1
snp58_A snp59_G snp60_A snp61_A snp62_G snp63_G snp64_T snp65_G
per0_per0 1 1 2 2 1 2 0 1
per1_per1 0 0 2 1 0 1 2 1
per2_per2 1 1 0 2 1 1 0 1
snp66_C snp67_G snp68_A snp69_A snp70_C snp71_G snp72_A snp73_C
per0_per0 1 1 0 1 2 2 2 0
per1_per1 1 1 1 1 1 1 1 1
per2_per2 0 1 1 2 1 2 NA 0
snp74_G snp75_T snp76_C snp77_C snp78_C snp79_A snp80_C snp81_A
per0_per0 1 1 1 2 1 2 2 1
per1_per1 2 0 1 2 1 2 2 1
per2_per2 1 1 1 2 0 0 1 0
snp82_T snp83_G snp84_T snp85_T snp86_G snp87_A snp88_G snp89_G
per0_per0 0 1 0 1 1 2 2 1
per1_per1 1 1 0 1 1 0 2 1
per2_per2 0 2 2 0 0 0 2 1
snp90_C snp91_G snp92_T snp93_T snp94_T snp95_A snp96_C snp97_G
per0_per0 2 1 0 0 0 1 0 2
per1_per1 2 1 2 1 1 1 0 1
per2_per2 1 1 0 1 1 1 1 1
snp98_A snp99_T snp100_T snp101_T snp102_T snp103_G snp104_T snp105_C
per0_per0 2 2 2 0 NA 0 1 1
per1_per1 NA 1 2 0 1 1 2 0
per2_per2 0 1 1 2 2 2 1 2
snp106_T snp107_T snp108_T snp109_A snp110_A snp111_A snp112_G
per0_per0 1 1 0 0 0 1 0
per1_per1 1 1 1 1 1 2 1
per2_per2 2 0 1 0 1 0 1
snp113_G snp114_T snp115_T snp116_T snp117_T snp118_C snp119_T
per0_per0 0 0 2 1 0 1 1
per1_per1 0 1 1 0 0 0 0
per2_per2 1 2 2 0 1 1 1
snp120_C snp121_T snp122_C snp123_A snp124_T snp125_C snp126_C
per0_per0 0 1 0 1 NA NA 1
per1_per1 1 2 2 1 1 1 1
per2_per2 0 0 0 1 0 1 0
snp127_A snp128_A snp129_T snp130_T snp131_G snp132_A snp133_T
per0_per0 1 1 0 0 1 0 1
per1_per1 0 1 1 1 0 0 2
per2_per2 0 1 1 1 1 1 0
snp134_A snp135_G snp136_A snp137_G snp138_A snp139_G snp140_T
per0_per0 0 2 1 0 1 1 0
per1_per1 0 1 1 1 0 1 1
per2_per2 1 0 2 1 2 1 2
snp141_A snp142_T snp143_G snp144_A snp145_C snp146_C snp147_T
per0_per0 1 0 1 1 0 1 1
per1_per1 0 0 2 2 1 0 0
per2_per2 0 1 1 0 1 0 2
snp148_G snp149_A snp150_C snp151_C snp152_C snp153_G snp154_A
per0_per0 0 1 1 2 1 2 2
per1_per1 1 1 2 1 1 2 1
per2_per2 2 1 1 1 0 1 0
snp155_A snp156_A snp157_A snp158_T snp159_G snp160_C snp161_A
per0_per0 0 0 2 2 0 1 1
per1_per1 1 2 1 2 2 2 1
per2_per2 0 0 2 0 1 0 1
snp162_T snp163_A snp164_T snp165_G snp166_T snp167_T snp168_C
per0_per0 2 1 0 0 2 2 0
per1_per1 2 1 1 1 1 1 1
per2_per2 1 0 1 1 1 1 1
snp169_C snp170_A snp171_C snp172_G snp173_A snp174_A snp175_C
per0_per0 1 1 2 1 0 0 1
per1_per1 1 1 2 1 1 NA 1
per2_per2 2 0 0 2 1 1 0
snp176_T snp177_C snp178_A snp179_G snp180_A snp181_C snp182_A
per0_per0 1 0 0 2 0 0 1
per1_per1 0 NA 2 0 0 1 0
per2_per2 2 1 1 0 1 1 0
snp183_G snp184_T snp185_T snp186_T snp187_A snp188_G snp189_A
per0_per0 1 1 2 1 0 2 2
per1_per1 NA 1 1 0 1 1 1
per2_per2 0 1 1 1 1 0 0
snp190_C snp191_C snp192_C snp193_T snp194_A snp195_C snp196_T
per0_per0 1 1 1 1 1 1 0
per1_per1 1 0 1 2 1 2 2
per2_per2 1 1 0 1 1 2 2
snp197_T snp198_A snp199_T snp200_C snp201_C snp202_C snp203_G
per0_per0 0 1 0 2 1 1 0
per1_per1 0 1 2 2 0 2 1
per2_per2 1 1 2 1 2 2 0
snp204_G snp205_A snp206_T snp207_G snp208_G snp209_A snp210_A
per0_per0 1 1 NA 2 1 0 1
per1_per1 1 1 2 0 0 1 2
per2_per2 1 1 0 2 0 0 1
snp211_G snp212_T snp213_C snp214_A snp215_C snp216_G snp217_A
per0_per0 1 0 0 1 1 2 0
per1_per1 1 2 0 1 1 0 1
per2_per2 1 0 1 0 0 2 NA
snp218_G snp219_G snp220_G snp221_G snp222_A snp223_C snp224_T
per0_per0 0 1 0 1 1 1 1
per1_per1 1 2 2 1 2 0 2
per2_per2 1 1 0 0 NA 2 1
snp225_G snp226_C snp227_T snp228_T snp229_A snp230_G snp231_T
per0_per0 1 1 1 1 1 2 2
per1_per1 2 0 2 1 1 0 2
per2_per2 1 0 2 1 0 1 1
snp232_A snp233_A snp234_G snp235_A snp236_A snp237_C snp238_A
per0_per0 0 0 2 1 0 1 0
per1_per1 1 1 0 0 0 1 1
per2_per2 1 2 1 0 1 2 0
snp239_T snp240_C snp241_T snp242_T snp243_A snp244_C snp245_G
per0_per0 1 1 2 1 0 2 2
per1_per1 2 1 1 1 1 2 0
per2_per2 1 1 0 1 0 1 1
snp246_A snp247_T snp248_C snp249_T snp250_T snp251_C snp252_G
per0_per0 1 0 2 0 2 1 0
per1_per1 2 0 0 0 1 1 1
per2_per2 0 1 1 1 NA 1 1
snp253_A snp254_C snp255_A snp256_T snp257_G snp258_A snp259_G
per0_per0 1 2 0 1 1 1 1
per1_per1 1 2 0 1 0 1 2
per2_per2 0 2 0 1 1 2 1
snp260_C snp261_A snp262_A snp263_T snp264_T snp265_T snp266_A
per0_per0 1 1 1 1 1 2 0
per1_per1 0 2 0 1 1 1 0
per2_per2 1 0 1 1 2 2 1
snp267_G snp268_G snp269_T snp270_T snp271_G snp272_T snp273_T
per0_per0 0 1 1 2 0 0 0
per1_per1 1 1 NA 0 1 1 1
per2_per2 2 0 1 2 0 0 2
snp274_A snp275_G snp276_A snp277_T snp278_T snp279_G snp280_G
per0_per0 1 1 1 1 1 0 0
per1_per1 1 0 2 0 1 1 2
per2_per2 1 1 1 2 0 0 2
snp281_T snp282_A snp283_A snp284_C snp285_T snp286_T snp287_G
per0_per0 0 0 2 1 1 1 1
per1_per1 0 1 1 2 0 0 0
per2_per2 1 1 1 1 1 1 1
snp288_T snp289_A snp290_T snp291_T snp292_T snp293_G snp294_G
per0_per0 1 1 2 1 0 2 1
per1_per1 0 2 1 2 1 0 2
per2_per2 1 1 1 2 1 0 2
snp295_C snp296_T snp297_A snp298_C snp299_C snp300_C snp301_T
per0_per0 1 0 1 1 1 1 NA
per1_per1 1 0 0 2 2 1 1
per2_per2 1 1 1 1 2 2 1
snp302_A snp303_G snp304_C snp305_G snp306_C snp307_T snp308_C
per0_per0 1 0 2 0 1 0 1
per1_per1 0 0 0 0 1 1 1
per2_per2 1 2 1 1 1 1 0
snp309_A snp310_C snp311_G snp312_T snp313_T snp314_C snp315_A
per0_per0 1 2 0 1 1 1 2
per1_per1 1 2 1 1 0 1 1
per2_per2 1 1 1 1 1 0 0
snp316_C snp317_T snp318_T snp319_C snp320_C snp321_C snp322_T
per0_per0 0 1 1 1 1 0 1
per1_per1 1 1 2 1 0 0 0
per2_per2 1 1 1 0 1 2 1
snp323_A snp324_C snp325_A snp326_A snp327_A snp328_C snp329_G
per0_per0 2 1 1 0 1 2 0
per1_per1 2 2 0 1 0 1 1
per2_per2 0 1 1 2 0 1 1
snp330_G snp331_G snp332_G snp333_T snp334_A snp335_T snp336_A
per0_per0 0 2 1 2 2 2 0
per1_per1 0 1 0 2 0 1 0
per2_per2 1 1 NA 2 1 1 1
snp337_C snp338_C snp339_A snp340_G snp341_C snp342_T snp343_A
per0_per0 1 0 1 2 0 1 1
per1_per1 1 2 1 1 0 2 2
per2_per2 1 1 0 1 1 0 2
snp344_T snp345_G snp346_C snp347_T snp348_C snp349_C snp350_C
per0_per0 2 0 0 1 1 1 2
per1_per1 1 0 0 2 2 0 0
per2_per2 2 1 1 1 1 1 0
snp351_A snp352_A snp353_T snp354_G snp355_T snp356_T snp357_A
per0_per0 1 2 1 2 1 2 2
per1_per1 1 2 NA 0 2 2 0
per2_per2 0 1 NA 0 2 1 1
snp358_A snp359_A snp360_A snp361_G snp362_A snp363_G snp364_C
per0_per0 1 0 1 1 1 1 1
per1_per1 1 1 0 1 1 0 1
per2_per2 0 0 0 1 2 1 1
snp365_C snp366_A snp367_A snp368_C snp369_G snp370_T snp371_T
per0_per0 0 1 1 0 0 1 1
per1_per1 1 1 2 1 1 1 1
per2_per2 2 0 2 2 1 1 0
snp372_T snp373_G snp374_G snp375_T snp376_A snp377_G snp378_G
per0_per0 0 1 1 1 0 2 1
per1_per1 2 1 1 1 1 1 1
per2_per2 2 0 2 0 1 1 1
snp379_T snp380_A snp381_A snp382_T snp383_C snp384_A snp385_T
per0_per0 1 0 1 0 1 1 0
per1_per1 1 1 1 0 0 0 2
per2_per2 0 0 1 1 1 2 1
snp386_C snp387_A snp388_G snp389_C snp390_T snp391_A snp392_G
per0_per0 1 2 1 1 1 2 1
per1_per1 1 0 0 0 1 1 1
per2_per2 1 1 NA 1 2 1 1
snp393_C snp394_T snp395_G snp396_C snp397_T snp398_C snp399_T
per0_per0 2 0 0 1 2 0 2
per1_per1 0 0 2 1 2 2 2
per2_per2 0 1 1 0 2 0 1
snp400_A snp401_C snp402_T snp403_A snp404_C snp405_A snp406_G
per0_per0 1 2 1 0 1 0 1
per1_per1 1 0 1 2 2 0 2
per2_per2 1 0 0 1 1 1 0
snp407_A snp408_T snp409_G snp410_A snp411_G snp412_G snp413_C
per0_per0 0 2 1 1 1 1 0
per1_per1 1 1 2 2 2 1 2
per2_per2 1 2 1 2 1 1 NA
snp414_T snp415_A snp416_T snp417_A snp418_G snp419_C snp420_A
per0_per0 1 1 1 0 1 0 1
per1_per1 1 1 1 0 2 1 1
per2_per2 1 1 1 0 1 2 2
snp421_C snp422_G snp423_G snp424_C snp425_C snp426_G snp427_T
per0_per0 1 2 2 0 1 1 1
per1_per1 1 2 2 2 0 1 1
per2_per2 2 1 0 1 0 1 0
snp428_G snp429_T snp430_A snp431_A snp432_A snp433_A snp434_G
per0_per0 0 1 1 0 2 2 0
per1_per1 1 1 0 1 1 2 1
per2_per2 2 2 1 2 2 1 2
snp435_A snp436_A snp437_C snp438_T snp439_T snp440_C snp441_A
per0_per0 2 2 1 2 1 1 1
per1_per1 1 1 0 0 0 1 1
per2_per2 1 1 1 1 1 2 0
snp442_C snp443_C snp444_G snp445_T snp446_C snp447_A snp448_A
per0_per0 0 1 1 0 1 2 0
per1_per1 1 1 1 2 1 1 1
per2_per2 0 0 2 1 0 1 0
snp449_T snp450_A snp451_A snp452_A snp453_T snp454_T snp455_A
per0_per0 0 1 0 1 1 2 1
per1_per1 1 0 2 2 1 1 2
per2_per2 1 1 0 0 2 1 1
snp456_A snp457_C snp458_A snp459_A snp460_C snp461_A snp462_T
per0_per0 2 1 2 1 2 0 1
per1_per1 0 2 2 1 1 2 1
per2_per2 2 1 1 1 1 1 0
snp463_G snp464_T snp465_T snp466_A snp467_T snp468_C snp469_T
per0_per0 0 2 0 2 1 2 1
per1_per1 1 2 1 2 0 1 0
per2_per2 0 1 1 1 1 0 1
snp470_C snp471_G snp472_A snp473_C snp474_A snp475_A snp476_T
per0_per0 1 1 1 1 2 1 1
per1_per1 2 0 2 1 1 1 1
per2_per2 0 0 0 0 1 NA 1
snp477_C snp478_G snp479_A snp480_T snp481_G snp482_T snp483_C
per0_per0 1 0 1 1 0 1 1
per1_per1 2 NA 1 1 1 1 1
per2_per2 1 2 1 1 0 0 0
snp484_A snp485_G snp486_G snp487_T snp488_A snp489_C snp490_A
per0_per0 2 1 2 1 2 0 0
per1_per1 1 NA 2 1 0 2 0
per2_per2 1 0 1 0 1 0 1
snp491_A snp492_C snp493_C snp494_T snp495_A snp496_A snp497_A
per0_per0 1 2 0 1 1 1 1
per1_per1 1 2 0 1 1 0 2
per2_per2 1 1 1 2 1 1 0
snp498_T snp499_A snp500_T snp501_G snp502_A snp503_T snp504_G
per0_per0 1 2 1 0 0 1 1
per1_per1 2 1 1 1 0 2 0
per2_per2 0 0 1 0 2 2 1
snp505_T snp506_C snp507_C snp508_A snp509_C snp510_A snp511_A
per0_per0 0 0 1 1 1 1 1
per1_per1 0 1 2 1 1 2 0
per2_per2 0 1 1 1 2 1 1
snp512_G snp513_C snp514_C snp515_G snp516_A snp517_C snp518_G
per0_per0 0 2 1 1 2 2 2
per1_per1 1 1 1 1 1 1 1
per2_per2 1 1 0 1 NA 2 1
snp519_C snp520_C snp521_A snp522_A snp523_T snp524_A snp525_C
per0_per0 2 1 1 2 1 1 1
per1_per1 2 0 1 0 1 1 2
per2_per2 1 1 1 1 0 1 1
snp526_G snp527_A snp528_T snp529_C snp530_T snp531_C snp532_A
per0_per0 1 2 1 2 0 0 1
per1_per1 1 1 2 1 1 1 2
per2_per2 1 2 1 2 0 1 1
snp533_A snp534_C snp535_A snp536_A snp537_C snp538_T snp539_G
per0_per0 0 2 1 0 1 1 0
per1_per1 2 1 1 1 2 1 1
per2_per2 2 1 1 1 1 0 2
snp540_C snp541_G snp542_A snp543_G snp544_T snp545_C snp546_T
per0_per0 1 1 2 2 0 2 2
per1_per1 1 2 2 1 0 1 2
per2_per2 0 1 1 1 1 2 0
snp547_C snp548_C snp549_G snp550_A snp551_C snp552_A snp553_A
per0_per0 1 0 1 1 0 1 1
per1_per1 0 1 1 0 1 1 0
per2_per2 1 2 0 0 1 0 1
snp554_C snp555_G snp556_G snp557_C snp558_G snp559_G snp560_T
per0_per0 2 0 1 1 0 1 2
per1_per1 1 0 0 1 0 1 1
per2_per2 2 2 2 0 1 0 0
snp561_C snp562_T snp563_T snp564_G snp565_C snp566_T snp567_C
per0_per0 2 2 2 0 0 0 1
per1_per1 0 1 1 1 0 1 0
per2_per2 0 1 2 1 0 0 0
snp568_T snp569_T snp570_C snp571_A snp572_A snp573_A snp574_T
per0_per0 0 1 1 1 0 2 1
per1_per1 0 2 2 0 1 0 1
per2_per2 2 1 2 0 1 0 0
snp575_T snp576_G snp577_A snp578_T snp579_G snp580_C snp581_C
per0_per0 1 0 2 1 1 0 2
per1_per1 1 1 1 0 1 0 0
per2_per2 0 0 1 0 1 1 0
snp582_T snp583_G snp584_A snp585_G snp586_G snp587_G snp588_C
per0_per0 0 1 1 0 2 2 2
per1_per1 1 0 1 1 1 1 1
per2_per2 2 1 1 0 1 0 1
snp589_C snp590_G snp591_C snp592_G snp593_G snp594_G snp595_A
per0_per0 2 0 1 1 0 0 NA
per1_per1 2 2 1 1 1 2 1
per2_per2 2 0 0 1 0 0 2
snp596_A snp597_T snp598_T snp599_C snp600_A snp601_A snp602_A
per0_per0 1 1 0 2 1 0 NA
per1_per1 1 2 0 0 1 1 2
per2_per2 1 1 2 1 0 1 0
snp603_A snp604_G snp605_A snp606_G snp607_C snp608_C snp609_T
per0_per0 1 0 0 1 1 0 2
per1_per1 1 0 1 1 2 1 2
per2_per2 2 1 0 1 1 NA 0
snp610_C snp611_C snp612_G snp613_A snp614_T snp615_A snp616_C
per0_per0 0 0 1 1 0 1 1
per1_per1 2 1 1 0 1 1 0
per2_per2 1 1 0 2 0 1 2
snp617_G snp618_C snp619_G snp620_C snp621_C snp622_C snp623_C
per0_per0 1 0 2 1 0 0 0
per1_per1 1 2 1 2 0 1 0
per2_per2 2 2 1 2 0 1 1
snp624_A snp625_T snp626_T snp627_A snp628_T snp629_A snp630_C
per0_per0 1 0 1 1 0 NA 0
per1_per1 1 0 1 1 1 1 1
per2_per2 1 1 0 1 0 1 0
snp631_G snp632_T snp633_C snp634_A snp635_G snp636_G snp637_A
per0_per0 1 1 1 0 0 1 1
per1_per1 1 2 2 1 0 1 NA
per2_per2 2 1 1 1 0 NA 0
snp638_A snp639_G snp640_T snp641_T snp642_T snp643_G snp644_C
per0_per0 1 0 2 2 1 2 2
per1_per1 1 1 1 0 1 1 1
per2_per2 1 2 0 2 1 2 0
snp645_G snp646_A snp647_T snp648_G snp649_G snp650_G snp651_A
per0_per0 1 0 0 1 0 1 1
per1_per1 1 2 0 0 1 1 2
per2_per2 2 1 1 1 1 1 0
snp652_C snp653_C snp654_T snp655_T snp656_A snp657_G snp658_C
per0_per0 2 1 1 0 2 2 2
per1_per1 1 2 1 1 1 2 2
per2_per2 0 0 1 1 2 1 0
snp659_T snp660_C snp661_T snp662_T snp663_A snp664_A snp665_G
per0_per0 1 1 1 0 1 1 2
per1_per1 1 0 0 1 1 NA 1
per2_per2 2 0 1 0 1 1 1
snp666_G snp667_C snp668_T snp669_C snp670_C snp671_G snp672_C
per0_per0 0 0 1 1 0 2 0
per1_per1 2 2 1 0 1 1 1
per2_per2 0 1 2 1 1 2 0
snp673_A snp674_T snp675_C snp676_G snp677_C snp678_T snp679_T
per0_per0 1 1 1 0 1 0 1
per1_per1 0 1 1 0 0 1 1
per2_per2 1 1 1 1 0 1 1
snp680_T snp681_T snp682_G snp683_C snp684_A snp685_A snp686_G
per0_per0 2 0 2 1 1 0 1
per1_per1 1 2 1 1 0 1 0
per2_per2 1 1 1 2 1 1 2
snp687_A snp688_C snp689_C snp690_G snp691_G snp692_G snp693_G
per0_per0 1 0 NA 0 1 0 0
per1_per1 0 0 2 0 1 2 1
per2_per2 1 1 0 0 1 0 1
snp694_G snp695_G snp696_T snp697_C snp698_C snp699_G snp700_T
per0_per0 1 2 1 0 2 0 1
per1_per1 2 1 2 1 2 1 0
per2_per2 0 2 2 1 0 2 NA
snp701_C snp702_T snp703_T snp704_T snp705_T snp706_G snp707_G
per0_per0 0 0 0 1 1 NA 1
per1_per1 2 1 2 1 0 1 1
per2_per2 0 0 1 0 0 0 0
snp708_A snp709_T snp710_T snp711_C snp712_T snp713_A snp714_G
per0_per0 0 0 0 1 0 2 0
per1_per1 0 1 0 NA 1 2 1
per2_per2 0 1 1 2 NA 0 0
snp715_T snp716_A snp717_C snp718_G snp719_G snp720_A snp721_G
per0_per0 1 1 2 1 0 NA 1
per1_per1 2 1 2 0 1 1 0
per2_per2 1 1 1 2 1 1 0
snp722_G snp723_A snp724_C snp725_G snp726_A snp727_A snp728_G
per0_per0 1 1 1 0 0 0 0
per1_per1 2 1 2 1 1 1 1
per2_per2 1 1 1 1 1 0 1
snp729_T snp730_G snp731_A snp732_G snp733_T snp734_A snp735_G
per0_per0 2 0 0 1 1 0 0
per1_per1 2 2 1 1 2 0 2
per2_per2 2 1 2 1 1 2 1
snp736_G snp737_G snp738_T snp739_C snp740_A snp741_A snp742_G
per0_per0 1 0 1 2 1 0 0
per1_per1 0 0 2 0 1 0 1
per2_per2 NA 1 1 2 0 2 0
snp743_C snp744_C snp745_T snp746_C snp747_G snp748_A snp749_A
per0_per0 1 2 2 2 2 1 0
per1_per1 1 1 1 1 2 1 1
per2_per2 2 0 1 1 1 NA 2
snp750_C snp751_C snp752_A snp753_G snp754_G snp755_A snp756_T
per0_per0 0 0 1 1 1 0 1
per1_per1 2 1 1 1 0 0 1
per2_per2 1 0 2 1 1 1 0
snp757_C snp758_C snp759_T snp760_C snp761_T snp762_C snp763_T
per0_per0 0 2 0 0 2 1 2
per1_per1 0 0 0 1 0 1 2
per2_per2 2 0 2 0 2 0 1
snp764_G snp765_A snp766_C snp767_C snp768_C snp769_C snp770_C
per0_per0 0 2 1 1 0 0 2
per1_per1 NA 0 0 1 1 0 0
per2_per2 2 0 2 0 0 2 NA
snp771_T snp772_T snp773_G snp774_A snp775_C snp776_C snp777_A
per0_per0 1 0 1 0 2 0 0
per1_per1 1 0 1 0 2 0 0
per2_per2 1 0 0 2 1 1 1
snp778_G snp779_T snp780_C snp781_T snp782_G snp783_C snp784_A
per0_per0 0 2 1 2 1 1 2
per1_per1 1 1 1 1 1 0 0
per2_per2 2 1 1 1 0 1 0
snp785_T snp786_G snp787_G snp788_C snp789_G snp790_G snp791_C
per0_per0 1 0 0 0 1 NA 2
per1_per1 1 0 2 1 1 1 0
per2_per2 0 0 0 1 1 2 2
snp792_T snp793_T snp794_C snp795_A snp796_T snp797_C snp798_T
per0_per0 0 2 1 2 1 0 1
per1_per1 0 1 1 1 2 1 1
per2_per2 0 1 0 0 1 1 1
snp799_T snp800_T snp801_A snp802_G snp803_T snp804_T snp805_G
per0_per0 0 1 1 1 1 1 0
per1_per1 1 1 1 0 1 0 2
per2_per2 1 1 1 0 2 1 0
snp806_G snp807_A snp808_G snp809_T snp810_G snp811_A snp812_C
per0_per0 2 1 1 0 1 0 2
per1_per1 2 2 1 1 2 1 0
per2_per2 1 0 2 1 1 1 2
snp813_T snp814_T snp815_G snp816_A snp817_T snp818_G snp819_A
per0_per0 1 1 1 1 0 1 0
per1_per1 2 2 1 0 1 1 2
per2_per2 0 0 2 1 0 1 0
snp820_C snp821_A snp822_T snp823_G snp824_C snp825_T snp826_A
per0_per0 0 1 2 1 0 0 0
per1_per1 2 1 0 1 2 1 0
per2_per2 0 1 1 0 0 1 1
snp827_A snp828_G snp829_T snp830_T snp831_C snp832_A snp833_C
per0_per0 1 1 0 0 0 2 1
per1_per1 0 0 1 1 0 0 0
per2_per2 1 1 0 0 0 2 1
snp834_A snp835_G snp836_G snp837_A snp838_T snp839_T snp840_C
per0_per0 1 1 1 1 1 2 0
per1_per1 1 2 1 0 1 0 0
per2_per2 0 1 2 1 1 1 1
snp841_C snp842_A snp843_T snp844_G snp845_C snp846_A snp847_G
per0_per0 1 0 0 1 1 1 NA
per1_per1 2 1 2 0 0 1 1
per2_per2 0 0 0 1 1 0 1
snp848_G snp849_A snp850_G snp851_G snp852_G snp853_A snp854_A
per0_per0 1 1 1 0 1 0 0
per1_per1 0 1 1 0 1 0 0
per2_per2 0 2 2 2 1 1 0
snp855_C snp856_A snp857_T snp858_G snp859_A snp860_G snp861_T
per0_per0 2 1 0 0 1 1 0
per1_per1 1 2 2 1 1 NA 1
per2_per2 1 1 1 0 1 2 0
snp862_T snp863_C snp864_G snp865_A snp866_G snp867_C snp868_T
per0_per0 0 1 1 1 1 1 1
per1_per1 2 2 1 0 2 2 2
per2_per2 1 1 2 0 1 0 1
snp869_A snp870_A snp871_C snp872_A snp873_T snp874_T snp875_C
per0_per0 1 1 1 0 2 2 0
per1_per1 0 1 0 2 1 1 NA
per2_per2 2 0 2 1 1 2 0
snp876_T snp877_G snp878_C snp879_G snp880_G snp881_C snp882_T
per0_per0 1 0 0 0 1 1 1
per1_per1 1 1 1 1 1 0 0
per2_per2 1 2 2 2 0 1 0
snp883_C snp884_G snp885_G snp886_G snp887_C snp888_C snp889_T
per0_per0 0 1 1 1 1 1 2
per1_per1 1 2 2 0 0 0 1
per2_per2 0 1 1 1 1 NA 0
snp890_A snp891_T snp892_G snp893_T snp894_A snp895_C snp896_G
per0_per0 1 0 0 1 0 1 0
per1_per1 0 1 2 1 1 1 0
per2_per2 1 0 0 1 1 0 1
snp897_G snp898_T snp899_A snp900_C snp901_T snp902_G snp903_T
per0_per0 0 1 2 1 0 0 1
per1_per1 0 1 1 1 1 1 0
per2_per2 1 1 1 1 2 0 2
snp904_T snp905_C snp906_A snp907_C snp908_T snp909_T snp910_A
per0_per0 1 0 2 1 2 NA 1
per1_per1 2 1 2 2 1 1 NA
per2_per2 2 1 0 1 2 0 2
snp911_T snp912_G snp913_T snp914_T snp915_A snp916_T snp917_C
per0_per0 1 2 2 0 1 0 1
per1_per1 0 2 1 1 1 1 0
per2_per2 0 0 1 2 1 1 2
snp918_G snp919_C snp920_G snp921_T snp922_G snp923_A snp924_C
per0_per0 0 1 1 0 0 1 1
per1_per1 2 0 2 2 2 1 1
per2_per2 1 1 1 2 0 1 0
snp925_A snp926_T snp927_C snp928_G snp929_G snp930_A snp931_C
per0_per0 1 NA 1 2 2 0 1
per1_per1 0 1 0 0 0 1 1
per2_per2 0 1 2 1 0 1 2
snp932_T snp933_G snp934_G snp935_C snp936_A snp937_T snp938_G
per0_per0 2 2 1 2 2 1 1
per1_per1 0 2 0 0 1 1 1
per2_per2 2 0 1 1 1 1 1
snp939_C snp940_C snp941_T snp942_G snp943_G snp944_T snp945_T
per0_per0 0 1 1 2 1 1 2
per1_per1 0 0 1 2 1 2 1
per2_per2 1 1 1 1 2 1 1
snp946_A snp947_A snp948_A snp949_A snp950_C snp951_T snp952_G
per0_per0 1 0 1 2 0 1 1
per1_per1 1 1 1 1 0 1 1
per2_per2 1 2 1 0 1 0 2
snp953_G snp954_G snp955_A snp956_T snp957_T snp958_T snp959_G
per0_per0 2 1 1 1 1 2 0
per1_per1 1 1 0 0 2 1 1
per2_per2 0 1 0 1 0 0 1
snp960_T snp961_A snp962_C snp963_T snp964_A snp965_G snp966_A
per0_per0 0 1 2 2 0 1 0
per1_per1 2 1 2 1 1 0 1
per2_per2 1 2 1 0 1 1 2
snp967_C snp968_T snp969_A snp970_G snp971_C snp972_G snp973_A
per0_per0 0 0 1 1 1 0 2
per1_per1 1 2 1 1 0 1 0
per2_per2 2 1 0 1 0 1 0
snp974_A snp975_G snp976_T snp977_T snp978_A snp979_A snp980_A
per0_per0 1 1 1 0 1 0 0
per1_per1 1 1 0 1 1 1 1
per2_per2 0 2 0 1 1 1 0
snp981_T snp982_T snp983_C snp984_G snp985_C snp986_C snp987_C
per0_per0 1 1 1 2 0 1 1
per1_per1 0 1 1 1 0 0 0
per2_per2 2 2 0 1 2 1 2
snp988_C snp989_T snp990_G snp991_A snp992_T snp993_C snp994_T
per0_per0 1 2 1 1 0 2 1
per1_per1 1 1 0 1 1 1 1
per2_per2 0 1 1 1 2 1 0
snp995_T snp996_G snp997_T snp998_C snp999_G
per0_per0 1 1 0 1 NA
per1_per1 1 1 1 0 1
per2_per2 1 0 2 0 2
per0_per0 per1_per1 per2_per2 per3_per3 per4_per4 per5_per5
0 1 1 2 0 1
per6_per6 per7_per7 per8_per8 per9_per9 per10_per10 per11_per11
1 1 1 1 2 2
per12_per12 per13_per13 per14_per14 per15_per15 per16_per16 per17_per17
1 1 1 0 0 1
per18_per18 per19_per19 per20_per20 per21_per21 per22_per22 per23_per23
2 1 2 1 1 0
per24_per24 per25_per25 per26_per26 per27_per27 per28_per28 per29_per29
1 0 2 1 2 1
per30_per30 per31_per31 per32_per32 per33_per33 per34_per34 per35_per35
0 1 1 0 0 1
per36_per36 per37_per37 per38_per38 per39_per39 per40_per40 per41_per41
0 0 1 2 0 2
per42_per42 per43_per43 per44_per44 per45_per45 per46_per46 per47_per47
1 2 1 1 1 0
per48_per48 per49_per49
0 1
snp0_A snp1_C snp2_G
per0_per0 0 1 1
per1_per1 1 1 1
per2_per2 1 0 0
per3_per3 2 0 0
per4_per4 0 1 0
per5_per5 1 1 1
per6_per6 1 0 2
per7_per7 1 2 2
per8_per8 1 1 0
per9_per9 1 2 1
per10_per10 2 1 1
per11_per11 2 0 0
per12_per12 1 1 1
per13_per13 1 2 1
per14_per14 1 1 0
per15_per15 0 1 1
per16_per16 0 1 1
per17_per17 1 2 1
per18_per18 2 1 1
per19_per19 1 0 0
per20_per20 2 1 2
per21_per21 1 1 NA
per22_per22 1 1 1
per23_per23 0 1 1
per24_per24 1 2 NA
per25_per25 0 2 0
per26_per26 2 2 1
per27_per27 1 0 1
per28_per28 2 1 1
per29_per29 1 2 0
per30_per30 0 0 1
per31_per31 1 1 0
per32_per32 1 1 1
per33_per33 0 1 0
per34_per34 0 2 1
per35_per35 1 1 1
per36_per36 0 1 0
per37_per37 0 2 1
per38_per38 1 1 0
per39_per39 2 0 0
per40_per40 0 0 2
per41_per41 2 1 2
per42_per42 1 0 0
per43_per43 2 0 0
per44_per44 1 1 2
per45_per45 1 2 1
per46_per46 1 0 2
per47_per47 0 0 1
per48_per48 0 1 1
per49_per49 1 1 1
snp0_A snp1_C snp2_G
per0_per0 0 1 1
per1_per1 1 1 1
per2_per2 1 0 0
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