BGLR: Bayesian Generalized Linear Regression

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Bayesian Generalized Linear Regression.

Author
Gustavo de los Campos, Paulino Perez Rodriguez,
Date of publication
2016-08-19 19:42:09
Maintainer
Paulino Perez Rodriguez <perpdgo@colpos.mx>
License
GPL-3
Version
1.0.5

View on CRAN

Man pages

BGLR
Bayesian Generalized Linear Regression
BLR
Bayesian Linear Regression
getVariances
getVariances
mice
mice dataset
mice.A
Pedigree info for the mice dataset
mice.pheno
Phenotypical data for the mice dataset
mice.X
Molecular markers
plot.BGLR
Plots for BGLR Analysis
predict.BGLR
Model Predictions
read_bed
read_bed
readBinMat
readBinMat
read_ped
read_ped
residuals.BGLR
Extracts models residuals
summary.BGLR
summary for BGLR fitted models
wheat
wheat dataset
wheat.A
Pedigree info for the wheat dataset
wheat.sets
Sets for cross validation (CV)
wheat.X
Molecular markers
wheat.Y
Grain yield
write_bed
write_bed

Files in this package

BGLR
BGLR/COPYING
BGLR/inst
BGLR/inst/md
BGLR/inst/md/priors.jpg
BGLR/inst/md/example_heteroskedastic.md
BGLR/inst/md/example_saveEffects.md
BGLR/inst/md/simulationHumanGenos.md
BGLR/inst/md/hyperparameters.md
BGLR/inst/md/PC.md
BGLR/inst/md/categorical.md
BGLR/inst/md/GxE_usingInteractions.md
BGLR/inst/md/Validation.md
BGLR/inst/md/parallel.md
BGLR/inst/md/heterogeneity_interactions.md
BGLR/inst/md/GBLUP.md
BGLR/inst/md/effectsBRR.png
BGLR/inst/md/omicIntegration.md
BGLR/inst/md/BRR_sets.md
BGLR/inst/md/heritability.md
BGLR/inst/md/BayesianAlphabet.md
BGLR/inst/md/example_sets.md
BGLR/inst/md/mixedModel.md
BGLR/inst/md/RKHS.md
BGLR/inst/md/censored.md
BGLR/inst/extdata
BGLR/inst/extdata/sample.bed
BGLR/inst/extdata/sample.map
BGLR/inst/extdata/sample.fam
BGLR/inst/extdata/sample.ped
BGLR/inst/extdata/sample.bim
BGLR/inst/doc
BGLR/inst/doc/BGLR-extdoc.Rnw
BGLR/inst/doc/BGLR-extdoc.pdf
BGLR/src
BGLR/src/Makevars
BGLR/src/util_plink.c
BGLR/src/util_sample.c
BGLR/src/Makevars.win
BGLR/NAMESPACE
BGLR/demo
BGLR/demo/RKHS.R
BGLR/demo/BB.R
BGLR/demo/BL.R
BGLR/demo/BA.R
BGLR/demo/ordinal.R
BGLR/demo/BRR.R
BGLR/demo/read_ped.R
BGLR/demo/censored.R
BGLR/demo/Bernoulli.R
BGLR/demo/read_bed.R
BGLR/demo/00Index
BGLR/demo/BayesC.R
BGLR/demo/RKHS_KA.R
BGLR/demo/write_bed.R
BGLR/demo/BRR_sets.R
BGLR/CHANGELOG
BGLR/data
BGLR/data/mice.RData
BGLR/data/datalist
BGLR/data/wheat.RData
BGLR/R
BGLR/R/utils.R
BGLR/R/BGLR.R
BGLR/R/methods.R
BGLR/vignettes
BGLR/vignettes/fig_4.pdf
BGLR/vignettes/BGLR-extdoc.Rnw
BGLR/vignettes/fig_6.pdf
BGLR/vignettes/fig_5.pdf
BGLR/vignettes/fig_3.pdf
BGLR/vignettes/fig_2.png
BGLR/vignettes/references.bib
BGLR/vignettes/fig_1.pdf
BGLR/MD5
BGLR/build
BGLR/build/vignette.rds
BGLR/DESCRIPTION
BGLR/man
BGLR/man/figures
BGLR/man/figures/ETA.png
BGLR/man/wheat.Rd
BGLR/man/mice.pheno.Rd
BGLR/man/mice.Rd
BGLR/man/plot.BGLR.Rd
BGLR/man/mice.X.Rd
BGLR/man/BGLR.Rd
BGLR/man/wheat.A.Rd
BGLR/man/read_ped.Rd
BGLR/man/residuals.BGLR.Rd
BGLR/man/BLR.Rd
BGLR/man/read_bed.Rd
BGLR/man/predict.BGLR.Rd
BGLR/man/getVariances.Rd
BGLR/man/wheat.sets.Rd
BGLR/man/write_bed.Rd
BGLR/man/wheat.X.Rd
BGLR/man/mice.A.Rd
BGLR/man/wheat.Y.Rd
BGLR/man/readBinMat.Rd
BGLR/man/summary.BGLR.Rd