bgr.point | Internal functions (to support plotting the Gelman-Rubin... |
BRugs | Introduction to BRugs |
BRugsFit | BRugs' meta function |
buffer | Reading OpenBUGS buffer file |
bugs.data | Writing input for OpenBUGS |
bugs.inits | Writing input for OpenBUGS |
buildMCMC | Generating mcmc.list objects for package coda |
dic | DIC |
dimensions | Dimension of BUGS variables |
get.chain | Current chain to be initialized |
get.num.chains | Number of chains |
help.WinBUGS | WinBUGS documentation |
info.memory | Show memory usage |
info.modules | Loaded modules |
info.node | Node information |
info.updaters | Information on MCMC updaters |
model.adaptivePhase | Getting length of adaptive phase |
model.check | Checking the model file |
model.compile | Compiling the model |
model.data | Loading the data |
model.factory | Enable and disable factories to create updaters |
model.gen.inits | Generating initial values |
model.inits | Loading initial values |
model.iteration | Returns number of iterations |
model.names | Get variable names in model |
model.precision | Setting precision for prec figures |
model.RN | State of Random Number Generator |
model.save.state | Save the model's current state |
model.setAP | Changing settings of updating algorithms |
model.setWD | Set working directory |
model.update | Updating the model |
plot.autoC | Plot autocorrelation function for a scalar variable |
plot.bgr | Plot the Gelman-Rubin convergence statistic for a scalar... |
plot.density | Plot density estimate or histogram of a scalar variable |
plot.history | Trace of a scalar variable |
ranks | Calculation of ranks |
rats | ratsdata example |
samples.autoC | Plot autocorrelation function |
samples.bgr | Plot the Gelman-Rubin convergence statistic |
samples.clear | Clear recorded values |
samples.coda | Writing files in CODA format |
samples.correl | Correlation |
samples.density | Plot density estimate or histogram |
samples.get | Get settings used for calculations |
samples.history | Trace of a variable |
samples.monitors | Names of monitored scalar variables |
samples.sample | Stored values |
samples.set | Start recording |
samples.setting | Change settings used for calculations |
samples.size | Size of the stored sample |
samples.stats | Calculate summary statistics |
set.values | Setting current values |
summary | Summary of MCMC simulation |
unix/loadOpenBUGS | Load OpenBUGS from given directory |
windows/loadOpenBUGS | Load OpenBUGS from given directory |
write.datafile | Write data for OpenBUGS - intended for internal use only |
write.model | Creating an OpenBUGS model file |
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