Working with Sets the Tidy Way

activate | Determine the context of subsequent manipulations. |

add_column | Add column |

add_elements | Add elements to a TidySet |

add_relation | Add relations |

add_relations | Add relations to a TidySet |

add_sets | Add sets to a TidySet |

adjacency | Adjacency |

arrange_ | Arrange the order of a TidySet |

as.data.frame.TidySet | Transforms a TidySet to a data.frame |

as.list.TidySet | Convert to list |

BaseSet-package | BaseSet: Working with Sets the Tidy Way |

cardinality | Cardinality or membership of sets |

cartesian | Create the cartesian product of two sets |

complement | Complement TidySet |

complement_element | Complement of elements |

complement_set | Complement of a set |

df2TS | The opposite of as.data.frame |

droplevels.TidySet | Drop unused elements and sets |

elements | Elements of the TidySet |

element_size | Calculates the size of the elements |

fapply | Apply to fuzzy |

filter_ | Filter TidySet |

getGAF | Read a GAF file |

getGMT | Import GMT (Gene Matrix Transposed) files |

getOBO | Read an OBO file |

group | Create a new set from existing elements |

group_by_ | group_by TidySet |

incidence | Incidence |

independent | Independence of the sets |

intersection | Intersection of two or more sets |

is.fuzzy | Check if a TidySet is fuzzy. |

is_nested | Are some sets as elements of other sets? |

length_probability | Calculates the probability of a single length |

length_set | Calculates the probability |

move_to | Move columns between slots |

multiply_probabilities | Probability of a vector of probabilities |

mutate_ | Mutate |

name_elements | Name elements |

name_elements-set | Rename elements |

name_sets | Name sets |

name_sets-set | Rename sets |

naming | Name an operation |

nElements | Number of elements |

nRelations | Number of relations |

nSets | Number of sets |

pipe | Pipe operator |

power_set | Create the power set |

pull_ | Pull from a TidySet |

reexports | Objects exported from other packages |

relations | Relations of the TidySet |

remove_column | Remove column |

remove_element | Remove elements |

remove_relation | Remove a relation |

remove_set | Remove sets |

rename_elements | Rename elements |

rename_set | Rename sets |

select_ | select from a TidySet |

sets | Sets of the TidySet |

set_size | Calculates the size of a set |

set_symbols | A subset of symbols related to sets |

show-TidySet-method | Method to show the TidySet object |

size | Size |

subtract | Subtract |

tidy | Convert GSEABase classes to a TidySet |

tidySet | Create a TidySet object |

TidySet-class | A tidy class to represent a set |

union | Join sets |

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