getGAF: Read a GAF file
In BaseSet: Working with Sets the Tidy Way
getGAF R Documentation
Read a GAF file
Description
Read a GO Annotation File (GAF) formatted file
Usage
getGAF(x)
Arguments
x
A file in GAF format
Value
A TidySet object
References
The format is defined here.
See Also
Other IO functions:
getGMT(),
getOBO()
Examples
gafFile <- system.file(
package = "BaseSet", "extdata",
"go_human_rna_valid_subset.gaf"
)
gs <- getGAF(gafFile)
head(gs)
BaseSet documentation built on Aug. 22, 2023, 5:11 p.m.
R Package Documentation
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| getGAF | R Documentation |
Read a GAF file
Description
Read a GO Annotation File (GAF) formatted file
Usage
getGAF(x)
Arguments
x |
A file in GAF format |
Value
A TidySet object
References
The format is defined here.
See Also
Other IO functions:
getGMT(),
getOBO()
Examples
gafFile <- system.file(
package = "BaseSet", "extdata",
"go_human_rna_valid_subset.gaf"
)
gs <- getGAF(gafFile)
head(gs)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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