View source: R/zero_inflated_distribution.R
| bf.dist.zero_inflated_distribution | R Documentation |
The Zero-Inflated Poisson distribution is a discrete count-distribution designed for data with *more zeros* than would be expected under a standard Poisson. Essentially, it assumes two underlying processes: * With probability
\pi
you are in a "structural zero" state (i.e., you automatically get a zero count). * With probability
1 - \pi
you draw from a standard Poisson distribution with parameter
\lambda
.
This results in a mixture distribution that places more mass at zero than a Poisson alone would. It's widely used in, for instance, ecology (species counts with many zeros), insurance/claims problems, and any count-data setting with excess zeros.
bf.dist.zero_inflated_distribution(
base_dist,
gate = py_none(),
gate_logits = py_none(),
validate_args = py_none(),
name = "x",
obs = py_none(),
mask = py_none(),
sample = FALSE,
seed = py_none(),
shape = c(),
event = 0,
create_obj = FALSE,
to_jax = TRUE
)
base_dist |
Distribution: The base distribution to be zero-inflated (e.g., Poisson, NegativeBinomial). |
gate |
numeric(1): Probability of extra zeros (between 0 and 1). |
gate_logits |
numeric(1): Log-odds of extra zeros. |
validate_args |
Logical: Whether to validate parameter values. Defaults to 'reticulate::py_none()'. |
name |
A character string representing the name of the random variable within a model. This is used to uniquely identify the variable. Defaults to 'x'. |
obs |
A numeric vector or array of observed values. If provided, the random variable is conditioned on these values. If 'NULL', the variable is treated as a latent (unobserved) variable. Defaults to 'NULL'. |
mask |
logical(1): Optional boolean array to mask observations. |
sample |
A logical value that controls the function's behavior. If 'TRUE', the function will directly draw samples from the distribution. If 'FALSE', it will create a random variable within a model. Defaults to 'FALSE'. |
seed |
An integer used to set the random seed for reproducibility when 'sample = TRUE'. This argument has no effect when 'sample = FALSE', as randomness is handled by the model's inference engine. Defaults to 0. |
shape |
numeric(1): A multi-purpose argument for shaping. When 'sample=False' (model building), this is used with ‘.expand(shape)' to set the distribution’s batch shape. When 'sample=True' (direct sampling), this is used as 'sample_shape' to draw a raw JAX array of the given shape. Provide as a numeric vector (e.g., 'c(10)'). |
event |
int(1): The number of batch dimensions to reinterpret as event dimensions (used in model building). |
create_obj |
Logical: If True, returns the raw BI distribution object instead of creating a sample site. This is essential for building complex distributions like 'MixtureSameFamily'. |
to_jax |
Boolean. Indicates whether to return a JAX array or not. |
- When sample=FALSE, a BI Zero Inflated distribution object (for model building).
- When sample=TRUE, a JAX array of samples drawn from the Zero Inflated distribution (for direct sampling).
- When create_obj=TRUE, the raw BI distribution object (for advanced use cases).
https://num.pyro.ai/en/stable/distributions.html#zeroinflateddistribution
library(BayesForge)
m=importBF(platform='cpu')
bf.dist.zero_inflated_distribution(
base_dist = bf.dist.poisson(5, create_obj = TRUE),
gate=0.3, sample = TRUE)
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