BiBitR: R Wrapper for Java Implementation of BiBit

A simple R wrapper for the Java BiBit algorithm from "A biclustering algorithm for extracting bit-patterns from binary datasets" from Domingo et al. (2011) <DOI:10.1093/bioinformatics/btr464>. An simple adaption for the BiBit algorithm which allows noise in the biclusters is also introduced as well as a function to guide the algorithm towards given (sub)patterns. Further, a workflow to derive noisy biclusters from discoverd larger column patterns is included as well.

Getting started

Package details

AuthorDe Troyer Ewoud
MaintainerDe Troyer Ewoud <[email protected]>
LicenseGPL-3
Version0.3.1
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("BiBitR")

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BiBitR documentation built on July 4, 2017, 9:23 a.m.