Modeling under- and over-dispersed binary data using extended Poisson process models (EPPM).

Author | David M Smith, Malcolm J Faddy |

Date of publication | 2016-11-28 16:53:51 |

Maintainer | David M. Smith <david.m.smith@truvenhealth.com> |

License | GPL-2 |

Version | 2.0 |

**BBprob:** Calculation of vector of probabilities for the beta binomial...

**Berkshires.litters:** The data are of the number of male piglets born in litters of...

**BinaryEPPM:** Fitting of EPPM models to binary data.

**BinaryEPPM-package:** Mean and Variance Modeling of Binary Data

**CBprob:** Calculation of vector of probabilities for the correlated...

**coef.BinaryEPPM:** Extraction of model coefficients for BinaryEPPM Objects

**cooks.distance.BinaryEPPM:** Cook's distance for BinaryEPPM Objects

**doubexp:** Double exponential Link Function

**doubrecip:** Double reciprocal Link Function

**EPPMprob:** Calculation of vector of probabilities for a extended Poisson...

**fitted.BinaryEPPM:** Extraction of fitted values from BinaryEPPM Objects

**foodstamp.case:** Participation in the federal food stamp program.

**foodstamp.grouped:** Participation in the federal food stamp program as a list not...

**GasolineYield:** Data on gasoline yields.

**GBprob:** Calculation of vector of probabilities for the generalized...

**hatvalues.BinaryEPPM:** Extraction of hat matrix values from BinaryEPPM Objects

**Hiroshima.case:** Individual case data of chromosome aberrations in survivors...

**Hiroshima.grouped:** Data of chromosome aberrations in survivors of Hiroshima...

**KupperHaseman.case:** Kupper and Haseman example data

**LL.gradient:** Function used to calculate the first derivatives of the log...

**LL.Regression.Binary:** Function called by optim to calculate the log likelihood from...

**logLik.BinaryEPPM:** Extract Log-Likelihood

**loglog:** Log-log Link Function

**Luningetal.litters:** Number of trials (implantations) in data of Luning, et al.,...

**Model.BCBinProb:** Probabilities for beta and correlated binomial distributions...

**Model.Binary:** Function for obtaining output from distributional models.

**Model.GB:** Probabilities for binomial and generalized binomial...

**Model.JMVGB:** Probabilities for generalized binomial distributions given...

**Parkes.litters:** The data are of the number of male piglets born in litters of...

**plot.BinaryEPPM:** Diagnostic Plots for BinaryEPPM Objects

**powerlogit:** Power Logit Link Function

**predict.BinaryEPPM:** Prediction Method for BinaryEPPM Objects

**print.BinaryEPPM:** Printing of BinaryEPPM Objects

**print.summaryBinaryEPPM:** Printing of summaryBinaryEPPM Objects

**residuals.BinaryEPPM:** Residuals for BinaryEPPM Objects

**ropespores.case:** Dilution series for the presence of rope spores.

**ropespores.grouped:** Dilution series for the presence of rope spores.

**summary.BinaryEPPM:** Summary of BinaryEPPM Objects

**Titanic.survivors.case:** Individual case data of Titanic survivors

**Titanic.survivors.grouped:** Titanic survivors data in frequency distribution form.

**vcov.BinaryEPPM:** Variance/Covariance Matrix for Coefficients

**Williams.litters:** Number of implantations, data of Williams (1996).

**Yorkshires.litters:** The data are of the number of male piglets born in litters of...

BinaryEPPM

BinaryEPPM/NAMESPACE

BinaryEPPM/data

BinaryEPPM/data/Titanic.survivors.case.rda

BinaryEPPM/data/Williams.litters.rda

BinaryEPPM/data/foodstamp.case.rda

BinaryEPPM/data/ropespores.case.rda

BinaryEPPM/data/Parkes.litters.rda

BinaryEPPM/data/KupperHaseman.case.rda

BinaryEPPM/data/Hiroshima.case.rda

BinaryEPPM/data/Yorkshires.litters.rda

BinaryEPPM/data/Titanic.survivors.grouped.rda

BinaryEPPM/data/Hiroshima.grouped.rda

BinaryEPPM/data/ropespores.grouped.rda

BinaryEPPM/data/GasolineYield.rda

BinaryEPPM/data/Berkshires.litters.rda

BinaryEPPM/data/Luningetal.litters.rda

BinaryEPPM/data/foodstamp.grouped.rda

BinaryEPPM/R

BinaryEPPM/R/Model.GB.R
BinaryEPPM/R/residuals.BinaryEPPM.R
BinaryEPPM/R/Model.JMVGB.R
BinaryEPPM/R/powerlogit.R
BinaryEPPM/R/BBprob.R
BinaryEPPM/R/LL.gradient.R
BinaryEPPM/R/cooks.distance.BinaryEPPM.R
BinaryEPPM/R/GBprob.R
BinaryEPPM/R/predict.BinaryEPPM.R
BinaryEPPM/R/doubexp.R
BinaryEPPM/R/coef.BinaryEPPM.R
BinaryEPPM/R/BinaryEPPM.R
BinaryEPPM/R/Model.BCBinProb.R
BinaryEPPM/R/hatvalues.BinaryEPPM.R
BinaryEPPM/R/CBprob.R
BinaryEPPM/R/EPPMprob.R
BinaryEPPM/R/vcov.BinaryEPPM.R
BinaryEPPM/R/Model.Binary.R
BinaryEPPM/R/doubrecip.R
BinaryEPPM/R/logLik.BinaryEPPM.R
BinaryEPPM/R/plot.BinaryEPPM.R
BinaryEPPM/R/fitted.BinaryEPPM.R
BinaryEPPM/R/LL.Regression.Binary.R
BinaryEPPM/R/loglog.R
BinaryEPPM/R/print.BinaryEPPM.R
BinaryEPPM/R/summary.BinaryEPPM.R
BinaryEPPM/R/print.summaryBinaryEPPM.R
BinaryEPPM/MD5

BinaryEPPM/build

BinaryEPPM/build/partial.rdb

BinaryEPPM/DESCRIPTION

BinaryEPPM/man

BinaryEPPM/man/Titanic.survivors.grouped.Rd
BinaryEPPM/man/foodstamp.grouped.Rd
BinaryEPPM/man/Titanic.survivors.case.Rd
BinaryEPPM/man/powerlogit.Rd
BinaryEPPM/man/Hiroshima.grouped.Rd
BinaryEPPM/man/BinaryEPPM-package.Rd
BinaryEPPM/man/Model.BCBinProb.Rd
BinaryEPPM/man/vcov.BinaryEPPM.Rd
BinaryEPPM/man/summary.BinaryEPPM.Rd
BinaryEPPM/man/LL.Regression.Binary.Rd
BinaryEPPM/man/fitted.BinaryEPPM.Rd
BinaryEPPM/man/CBprob.Rd
BinaryEPPM/man/Williams.litters.Rd
BinaryEPPM/man/hatvalues.BinaryEPPM.Rd
BinaryEPPM/man/GasolineYield.Rd
BinaryEPPM/man/Model.JMVGB.Rd
BinaryEPPM/man/GBprob.Rd
BinaryEPPM/man/coef.BinaryEPPM.Rd
BinaryEPPM/man/Luningetal.litters.Rd
BinaryEPPM/man/doubexp.Rd
BinaryEPPM/man/KupperHaseman.case.Rd
BinaryEPPM/man/Model.Binary.Rd
BinaryEPPM/man/doubrecip.Rd
BinaryEPPM/man/print.summaryBinaryEPPM.Rd
BinaryEPPM/man/plot.BinaryEPPM.Rd
BinaryEPPM/man/loglog.Rd
BinaryEPPM/man/Model.GB.Rd
BinaryEPPM/man/cooks.distance.BinaryEPPM.Rd
BinaryEPPM/man/BBprob.Rd
BinaryEPPM/man/BinaryEPPM.Rd
BinaryEPPM/man/ropespores.grouped.Rd
BinaryEPPM/man/residuals.BinaryEPPM.Rd
BinaryEPPM/man/logLik.BinaryEPPM.Rd
BinaryEPPM/man/print.BinaryEPPM.Rd
BinaryEPPM/man/predict.BinaryEPPM.Rd
BinaryEPPM/man/Berkshires.litters.Rd
BinaryEPPM/man/Parkes.litters.Rd
BinaryEPPM/man/ropespores.case.Rd
BinaryEPPM/man/foodstamp.case.Rd
BinaryEPPM/man/EPPMprob.Rd
BinaryEPPM/man/Hiroshima.case.Rd
BinaryEPPM/man/LL.gradient.Rd
BinaryEPPM/man/Yorkshires.litters.Rd
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