Modeling under- and over-dispersed binary data using extended Poisson process models (EPPM).

Install the latest version of this package by entering the following in R:

`install.packages("BinaryEPPM")`

Author | David M Smith, Malcolm J Faddy |

Date of publication | 2016-11-28 16:53:51 |

Maintainer | David M. Smith <david.m.smith@truvenhealth.com> |

License | GPL-2 |

Version | 2.0 |

**BBprob:** Calculation of vector of probabilities for the beta binomial...

**Berkshires.litters:** The data are of the number of male piglets born in litters of...

**BinaryEPPM:** Fitting of EPPM models to binary data.

**BinaryEPPM-package:** Mean and Variance Modeling of Binary Data

**CBprob:** Calculation of vector of probabilities for the correlated...

**coef.BinaryEPPM:** Extraction of model coefficients for BinaryEPPM Objects

**cooks.distance.BinaryEPPM:** Cook's distance for BinaryEPPM Objects

**doubexp:** Double exponential Link Function

**doubrecip:** Double reciprocal Link Function

**EPPMprob:** Calculation of vector of probabilities for a extended Poisson...

**fitted.BinaryEPPM:** Extraction of fitted values from BinaryEPPM Objects

**foodstamp.case:** Participation in the federal food stamp program.

**foodstamp.grouped:** Participation in the federal food stamp program as a list not...

**GasolineYield:** Data on gasoline yields.

**GBprob:** Calculation of vector of probabilities for the generalized...

**hatvalues.BinaryEPPM:** Extraction of hat matrix values from BinaryEPPM Objects

**Hiroshima.case:** Individual case data of chromosome aberrations in survivors...

**Hiroshima.grouped:** Data of chromosome aberrations in survivors of Hiroshima...

**KupperHaseman.case:** Kupper and Haseman example data

**LL.gradient:** Function used to calculate the first derivatives of the log...

**LL.Regression.Binary:** Function called by optim to calculate the log likelihood from...

**logLik.BinaryEPPM:** Extract Log-Likelihood

**loglog:** Log-log Link Function

**Luningetal.litters:** Number of trials (implantations) in data of Luning, et al.,...

**Model.BCBinProb:** Probabilities for beta and correlated binomial distributions...

**Model.Binary:** Function for obtaining output from distributional models.

**Model.GB:** Probabilities for binomial and generalized binomial...

**Model.JMVGB:** Probabilities for generalized binomial distributions given...

**Parkes.litters:** The data are of the number of male piglets born in litters of...

**plot.BinaryEPPM:** Diagnostic Plots for BinaryEPPM Objects

**powerlogit:** Power Logit Link Function

**predict.BinaryEPPM:** Prediction Method for BinaryEPPM Objects

**print.BinaryEPPM:** Printing of BinaryEPPM Objects

**print.summaryBinaryEPPM:** Printing of summaryBinaryEPPM Objects

**residuals.BinaryEPPM:** Residuals for BinaryEPPM Objects

**ropespores.case:** Dilution series for the presence of rope spores.

**ropespores.grouped:** Dilution series for the presence of rope spores.

**summary.BinaryEPPM:** Summary of BinaryEPPM Objects

**Titanic.survivors.case:** Individual case data of Titanic survivors

**Titanic.survivors.grouped:** Titanic survivors data in frequency distribution form.

**vcov.BinaryEPPM:** Variance/Covariance Matrix for Coefficients

**Williams.litters:** Number of implantations, data of Williams (1996).

**Yorkshires.litters:** The data are of the number of male piglets born in litters of...

BBprob | Man page |

Berkshires.litters | Man page |

BinaryEPPM | Man page |

BinaryEPPM-package | Man page |

CBprob | Man page |

coef.BinaryEPPM | Man page |

cooks.distance.BinaryEPPM | Man page |

doubexp | Man page |

doubrecip | Man page |

EPPMprob | Man page |

fitted.BinaryEPPM | Man page |

foodstamp.case | Man page |

foodstamp.grouped | Man page |

GasolineYield | Man page |

GBprob | Man page |

hatvalues.BinaryEPPM | Man page |

Hiroshima.case | Man page |

Hiroshima.grouped | Man page |

KupperHaseman.case | Man page |

LL.gradient | Man page |

LL.Regression.Binary | Man page |

logLik.BinaryEPPM | Man page |

loglog | Man page |

Luningetal.litters | Man page |

Model.BCBinProb | Man page |

Model.Binary | Man page |

Model.GB | Man page |

Model.JMVGB | Man page |

Parkes.litters | Man page |

plot.BinaryEPPM | Man page |

powerlogit | Man page |

predict.BinaryEPPM | Man page |

print.BinaryEPPM | Man page |

print.summaryBinaryEPPM | Man page |

residuals.BinaryEPPM | Man page |

ropespores.case | Man page |

ropespores.grouped | Man page |

summary.BinaryEPPM | Man page |

Titanic.survivors.case | Man page |

Titanic.survivors.grouped | Man page |

vcov.BinaryEPPM | Man page |

Williams.litters | Man page |

Yorkshires.litters | Man page |

NAMESPACE

data

data/Titanic.survivors.case.rda

data/Williams.litters.rda

data/foodstamp.case.rda

data/ropespores.case.rda

data/Parkes.litters.rda

data/KupperHaseman.case.rda

data/Hiroshima.case.rda

data/Yorkshires.litters.rda

data/Titanic.survivors.grouped.rda

data/Hiroshima.grouped.rda

data/ropespores.grouped.rda

data/GasolineYield.rda

data/Berkshires.litters.rda

data/Luningetal.litters.rda

data/foodstamp.grouped.rda

R

R/Model.GB.R
R/residuals.BinaryEPPM.R
R/Model.JMVGB.R
R/powerlogit.R
R/BBprob.R
R/LL.gradient.R
R/cooks.distance.BinaryEPPM.R
R/GBprob.R
R/predict.BinaryEPPM.R
R/doubexp.R
R/coef.BinaryEPPM.R
R/BinaryEPPM.R
R/Model.BCBinProb.R
R/hatvalues.BinaryEPPM.R
R/CBprob.R
R/EPPMprob.R
R/vcov.BinaryEPPM.R
R/Model.Binary.R
R/doubrecip.R
R/logLik.BinaryEPPM.R
R/plot.BinaryEPPM.R
R/fitted.BinaryEPPM.R
R/LL.Regression.Binary.R
R/loglog.R
R/print.BinaryEPPM.R
R/summary.BinaryEPPM.R
R/print.summaryBinaryEPPM.R
MD5

build

build/partial.rdb

DESCRIPTION

man

man/Titanic.survivors.grouped.Rd
man/foodstamp.grouped.Rd
man/Titanic.survivors.case.Rd
man/powerlogit.Rd
man/Hiroshima.grouped.Rd
man/BinaryEPPM-package.Rd
man/Model.BCBinProb.Rd
man/vcov.BinaryEPPM.Rd
man/summary.BinaryEPPM.Rd
man/LL.Regression.Binary.Rd
man/fitted.BinaryEPPM.Rd
man/CBprob.Rd
man/Williams.litters.Rd
man/hatvalues.BinaryEPPM.Rd
man/GasolineYield.Rd
man/Model.JMVGB.Rd
man/GBprob.Rd
man/coef.BinaryEPPM.Rd
man/Luningetal.litters.Rd
man/doubexp.Rd
man/KupperHaseman.case.Rd
man/Model.Binary.Rd
man/doubrecip.Rd
man/print.summaryBinaryEPPM.Rd
man/plot.BinaryEPPM.Rd
man/loglog.Rd
man/Model.GB.Rd
man/cooks.distance.BinaryEPPM.Rd
man/BBprob.Rd
man/BinaryEPPM.Rd
man/ropespores.grouped.Rd
man/residuals.BinaryEPPM.Rd
man/logLik.BinaryEPPM.Rd
man/print.BinaryEPPM.Rd
man/predict.BinaryEPPM.Rd
man/Berkshires.litters.Rd
man/Parkes.litters.Rd
man/ropespores.case.Rd
man/foodstamp.case.Rd
man/EPPMprob.Rd
man/Hiroshima.case.Rd
man/LL.gradient.Rd
man/Yorkshires.litters.Rd
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