LGcpp_MLstate_per_node: Get the ML states per node, from a states table
In BioGeoBEARS: BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts

Description Usage Arguments Details Value Note Author(s) References See Also Examples

View source: R/BioGeoBEARS_readwrite_v1.R

Given a table of states probabilities from either LGcpp_states_fn_to_table or LGcpp_states_fn_to_table, get the ML state for each node.

1	LGcpp_MLstate_per_node(states)

states

A data.frame containing the node numbers, states, and state probabilities.

See get_lagrange_nodenums for connecting these node numbers to APE node numbers.

MLstates A data.frame containing the node numbers, ML states, and state probabilities.

Go BEARS!

Nicholas J. Matzke matzke@berkeley.edu

http://phylo.wikidot.com/matzke-2013-international-biogeography-society-poster https://code.google.com/p/lagrange/

Matzke_2012_IBS

ReeSmith2008

get_lagrange_nodenums, LGcpp_states_fn_to_table, LGcpp_states_fn_to_table

test=1

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