get_nodenum_structural_root: Gets the root node
In BioGeoBEARS: BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts
Description
Usage
Arguments
Value
Note
Author(s)
References
See Also
Examples
View source: R/BioGeoBEARS_readwrite_v1.R
Description
This function gets the root node by finding the node not
in the descendants list (edge[,2]). This may be more
reliable than e.g. assuming length(tr$tip.label)+1.
Usage
1
get_nodenum_structural_root(t, print_nodenum = FALSE)
Arguments
t
A tree object in phylo
format.
print_nodenum
Print the node numbers as you go
through the list? Default FALSE.
Value
root_nodenums_list
Note
Go BEARS!
Author(s)
Nicholas J. Matzke matzke@berkeley.edu
References
http://phylo.wikidot.com/matzke-2013-international-biogeography-society-poster
Matzke_2012_IBS
See Also
Examples
1
blah=1
BioGeoBEARS documentation built on May 29, 2017, 8:36 p.m.
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Description Usage Arguments Value Note Author(s) References See Also Examples
View source: R/BioGeoBEARS_readwrite_v1.R
Description
This function gets the root node by finding the node not in the descendants list (edge[,2]). This may be more reliable than e.g. assuming length(tr$tip.label)+1.
Usage
1 | get_nodenum_structural_root(t, print_nodenum = FALSE)
|
Arguments
t |
A tree object in |
print_nodenum |
Print the node numbers as you go through the list? Default FALSE. |
Value
root_nodenums_list
Note
Go BEARS!
Author(s)
Nicholas J. Matzke matzke@berkeley.edu
References
http://phylo.wikidot.com/matzke-2013-international-biogeography-society-poster
Matzke_2012_IBS
See Also
Examples
1 | blah=1
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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