nodenums_bottom_up: Assign node labels in bottom-up, left-first format (as in...
In BioGeoBEARS: BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts

Description Usage Arguments Value Note Author(s) References See Also Examples

View source: R/BioGeoBEARS_readwrite_v1.R

This function assigns node numbers by tracing up from the root. This corresponds to the node numbers in e.g. r8s (Sanderson (2003)).

1	nodenums_bottom_up(tr)

`tr`	A tree object in `phylo` format.

traverse_records

Go BEARS!

Nicholas J. Matzke matzke@berkeley.edu

http://phylo.wikidot.com/matzke-2013-international-biogeography-society-poster

Sanderson_2003_r8s

Matzke_2012_IBS

r8s

Marazzi_etal_Sanderson_2012_r8s_morph

phylo4,

test=1

Loading required package: rexpokit
Loading required package: SparseM

Attaching package: 'SparseM'

The following object is masked from 'package:base':

    backsolve

Loading required package: Rcpp
Loading required package: cladoRcpp
Loading required package: ape
Loading required package: phylobase

Attaching package: 'phylobase'

The following object is masked from 'package:ape':

    edges