order_LGnodes: Order LAGRANGE-numbered nodes so that they can be plotted in...
In BioGeoBEARS: BioGeography with Bayesian (and Likelihood) Evolutionary Analysis in R Scripts

Description Usage Arguments Value Note Author(s) References See Also Examples

What it says.

1 2	order_LGnodes(MLsplits_LGcpp, tr = NULL, removechar = NULL, type = "C++", type2 = "splits")

`MLsplits_LGcpp`	A data.frame containing the node numbers, splits, and split probabilities.
`tr`	An ape phylo object
`removechar`	The character to remove, if needed.
`type`	The type of LAGRANGE input (default C++)
`type2`	"splits" or "states"

MLsplits The splits table, ordered appropriately.

Go BEARS!

Nicholas J. Matzke matzke@berkeley.edu

http://phylo.wikidot.com/matzke-2013-international-biogeography-society-poster https://code.google.com/p/lagrange/

Matzke_2012_IBS

ReeSmith2008

get_lagrange_nodenums, LGpy_splits_fn_to_table, LGcpp_splits_fn_to_table

test=1

Loading required package: rexpokit
Loading required package: SparseM

Attaching package: 'SparseM'

The following object is masked from 'package:base':

    backsolve

Loading required package: Rcpp
Loading required package: cladoRcpp
Loading required package: ape
Loading required package: phylobase

Attaching package: 'phylobase'

The following object is masked from 'package:ape':

    edges