Blossom: Statistical Comparisons with Distance-Function Based Permutation Tests

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Provides tools for making statistical comparisons with distance-function based permutation tests developed by P. W. Mielke, Jr. and colleagues at Colorado State University (Mielke, P. W. & Berry, K. J. Permutation Methods: A Distance Function Approach (Springer, New York, 2001)) and for testing parameters estimated in linear models with permutation procedures developed by B. S. Cade and colleagues at the Fort Collins Science Center, U. S. Geological Survey.

Author
Marian Talbert, Jon Richards, Paul Mielke, and Brian Cade
Date of publication
2016-03-09 00:48:10
Maintainer
Marian Talbert <mtalbert@usgs.gov>
License
GPL (>= 2)
Version
1.4

View on CRAN

Man pages

acorn
Acorn Production
agree2
Lodgepole pine basal area and canopy cover
bgrouse
Blue grouse migration data
BlossomPkg
Statistical comparisons with distance-function based...
blue162
Example data of biweekly grouse locations
brad302
Hypothesized random normal N(3, 2) deviates
coverage
G-sample and goodness-of-fit tests based on empirical...
CoverageObj-class
Class '"CoverageObj"'
Dist2mvm
Report distance to the multivariate median
EMRPPObj-class
Class '"EMRPPObj"'
ex4rank
Example univariate data for MRPP
example1
Example bivariate data for MRPP
example3
Example univariate response data for MRPP
example4
Example univariate response data with outlier for MRPP
fraserf
Subalpine forest tree cover data
habitat
Blue grouse winter habitat selection data
hypothesis.test
Hypothesis testing for LAD objects
KSGFObj-class
Class "KSGFObj"
lad
Least absolute deviation
LADObj-class
Class '"LADObj"'
lahontan
Lahontan cutthroat trout density in streams
lily
Lily seedling counts
medq
Multivariate Medians and Distance Quantiles
MEDQObj-class
Class '"MEDQObj"'
mrbp
Multiresponse permutation procedures for randomized blocks
mrbp1
Variation in oven-dried biomass of shrubs
MRBPObj-class
Class '"MRBPObj"'
mrpp
Multiresponse permutation procedures
MRPPObj-class
Class '"MRPPObj"'
MRSPObj-class
Class '"MRSPObj"'
neter365
Soap scrap as a function of production line speed (Neter et...
npof
Orientation of movements of newt
ols
Ordinary least squares regression
paired1
Example of paired data set up in a blocked structure
paired2
Paired data structure
prefer
Habitat preference data for pheasants
ptmp
Permutation test for matched pairs
PTMPObj-class
Class '"PTMPObj"'
pvalue
Extract P-values
QuantValues
Report quantile values
rao
Circular orientation of homing pigeons (Rao 1976)
ResampVals
Extract resample values
sp
Multiresponse sequence procedure

Files in this package

Blossom
Blossom/inst
Blossom/inst/doc
Blossom/inst/doc/BlossomVignette.pdf
Blossom/src
Blossom/src/InternalFcts.f90
Blossom/src/myHelp.c
Blossom/NAMESPACE
Blossom/data
Blossom/data/mrbp1.txt.gz
Blossom/data/brad302.txt.gz
Blossom/data/paired1.txt.gz
Blossom/data/lily.txt.gz
Blossom/data/agree2.txt.gz
Blossom/data/bgrouse.txt.gz
Blossom/data/example4.txt.gz
Blossom/data/blue162.txt.gz
Blossom/data/acorn.txt.gz
Blossom/data/habitat.txt.gz
Blossom/data/paired2.txt.gz
Blossom/data/prefer.txt.gz
Blossom/data/ex4rank.txt.gz
Blossom/data/rao.txt.gz
Blossom/data/example1.txt.gz
Blossom/data/lahontan.txt.gz
Blossom/data/fraserf.txt.gz
Blossom/data/example3.txt.gz
Blossom/data/neter365.txt.gz
Blossom/data/npof.txt.gz
Blossom/R
Blossom/R/ptmp.r
Blossom/R/mrpp.r
Blossom/R/MedQObjDef.r
Blossom/R/lad.r
Blossom/R/EMRPPObjDef.r
Blossom/R/MRPPObjDef.r
Blossom/R/KSGFObjDef.r
Blossom/R/medq.r
Blossom/R/LADObjDef.r
Blossom/R/hypothesis.test.r
Blossom/R/PTMPObjDef.r
Blossom/R/ols.r
Blossom/R/MRBPObjDef.r
Blossom/R/CoverageObjDef.r
Blossom/R/sp.r
Blossom/R/mrbp.r
Blossom/R/coverage.r
Blossom/R/MRSPObjDef.r
Blossom/MD5
Blossom/DESCRIPTION
Blossom/man
Blossom/man/mrbp1.Rd
Blossom/man/ptmp.Rd
Blossom/man/rao.Rd
Blossom/man/lad.Rd
Blossom/man/fraserf.Rd
Blossom/man/brad302.Rd
Blossom/man/habitat.Rd
Blossom/man/PTMPObj-class.Rd
Blossom/man/example3.Rd
Blossom/man/coverage.Rd
Blossom/man/npof.Rd
Blossom/man/MRBPObj-class.Rd
Blossom/man/BlossomPkg.Rd
Blossom/man/paired1.Rd
Blossom/man/example1.Rd
Blossom/man/CoverageObj-class.Rd
Blossom/man/LADObj-class.Rd
Blossom/man/agree2.Rd
Blossom/man/neter365.Rd
Blossom/man/MEDQObj-class.Rd
Blossom/man/paired2.Rd
Blossom/man/Dist2mvm.Rd
Blossom/man/MRPPObj-class.Rd
Blossom/man/ols.Rd
Blossom/man/hypothesis.test.Rd
Blossom/man/lily.Rd
Blossom/man/bgrouse.Rd
Blossom/man/mrbp.Rd
Blossom/man/prefer.Rd
Blossom/man/QuantValues.Rd
Blossom/man/MRSPObj-class.Rd
Blossom/man/sp.Rd
Blossom/man/medq.Rd
Blossom/man/ex4rank.Rd
Blossom/man/KSGFObj-class.Rd
Blossom/man/acorn.Rd
Blossom/man/blue162.Rd
Blossom/man/mrpp.Rd
Blossom/man/ResampVals.Rd
Blossom/man/example4.Rd
Blossom/man/pvalue.Rd
Blossom/man/lahontan.Rd
Blossom/man/EMRPPObj-class.Rd