Blossom: Statistical Comparisons with Distance-Function Based Permutation Tests
Version 1.4

Provides tools for making statistical comparisons with distance-function based permutation tests developed by P. W. Mielke, Jr. and colleagues at Colorado State University (Mielke, P. W. & Berry, K. J. Permutation Methods: A Distance Function Approach (Springer, New York, 2001)) and for testing parameters estimated in linear models with permutation procedures developed by B. S. Cade and colleagues at the Fort Collins Science Center, U. S. Geological Survey.

Browse man pages Browse package API and functions Browse package files

AuthorMarian Talbert, Jon Richards, Paul Mielke, and Brian Cade
Date of publication2016-03-09 00:48:10
MaintainerMarian Talbert <mtalbert@usgs.gov>
LicenseGPL (>= 2)
Version1.4
Package repositoryView on CRAN
InstallationInstall the latest version of this package by entering the following in R:
install.packages("Blossom")

Man pages

acorn: Acorn Production
agree2: Lodgepole pine basal area and canopy cover
bgrouse: Blue grouse migration data
BlossomPkg: Statistical comparisons with distance-function based...
blue162: Example data of biweekly grouse locations
brad302: Hypothesized random normal N(3, 2) deviates
coverage: G-sample and goodness-of-fit tests based on empirical...
CoverageObj-class: Class '"CoverageObj"'
Dist2mvm: Report distance to the multivariate median
EMRPPObj-class: Class '"EMRPPObj"'
ex4rank: Example univariate data for MRPP
example1: Example bivariate data for MRPP
example3: Example univariate response data for MRPP
example4: Example univariate response data with outlier for MRPP
fraserf: Subalpine forest tree cover data
habitat: Blue grouse winter habitat selection data
hypothesis.test: Hypothesis testing for LAD objects
KSGFObj-class: Class "KSGFObj"
lad: Least absolute deviation
LADObj-class: Class '"LADObj"'
lahontan: Lahontan cutthroat trout density in streams
lily: Lily seedling counts
medq: Multivariate Medians and Distance Quantiles
MEDQObj-class: Class '"MEDQObj"'
mrbp: Multiresponse permutation procedures for randomized blocks
mrbp1: Variation in oven-dried biomass of shrubs
MRBPObj-class: Class '"MRBPObj"'
mrpp: Multiresponse permutation procedures
MRPPObj-class: Class '"MRPPObj"'
MRSPObj-class: Class '"MRSPObj"'
neter365: Soap scrap as a function of production line speed (Neter et...
npof: Orientation of movements of newt
ols: Ordinary least squares regression
paired1: Example of paired data set up in a blocked structure
paired2: Paired data structure
prefer: Habitat preference data for pheasants
ptmp: Permutation test for matched pairs
PTMPObj-class: Class '"PTMPObj"'
pvalue: Extract P-values
QuantValues: Report quantile values
rao: Circular orientation of homing pigeons (Rao 1976)
ResampVals: Extract resample values
sp: Multiresponse sequence procedure

Functions

BlossomPkg-package Man page
CoverageObj Man page
CoverageObj-class Man page
Dist2mvm Man page
Dist2mvm,MEDQObj-method Man page
Dist2mvm-methods Man page
EMRPPObj Man page
EMRPPObj-class Man page
KSGFObj-class Man page
LADObj Man page
LADObj-class Man page
MEDQObj Man page
MEDQObj-class Man page
MRBPObj-class Man page
MRPPObj-class Man page
MRSPObj Man page
MRSPObj-class Man page
PTMPObj-class Man page
QuantValues Man page
QuantValues,LADObj-method Man page
QuantValues-methods Man page
ResampVals Man page
ResampVals,CoverageObj-method Man page
ResampVals,LADObj-method Man page
ResampVals,MRBPObj-method Man page
ResampVals,MRPPObj-method Man page
ResampVals,MRSPObj-method Man page
ResampVals,PTMPObj-method Man page
ResampVals-methods Man page
acorn Man page
agree2 Man page
bgrouse Man page
blue162 Man page
brad302 Man page
coefficients,LADObj-method Man page
coverage Man page Source code
ex4rank Man page
example1 Man page
example3 Man page
example4 Man page
fraserf Man page
habitat Man page
hypothesis.test Man page Source code
lad Man page Source code
lahontan Man page
lily Man page
medq Man page Source code
mrbp Man page Source code
mrbp1 Man page
mrpp Man page Source code
neter365 Man page
npof Man page
ols Man page Source code
paired1 Man page
paired2 Man page
predict,LADObj-method Man page
prefer Man page
print,CoverageObj-method Man page
print,EMRPPObj-method Man page
print,KSGFObj-method Man page
print,LADObj-method Man page
print,MEDQObj-method Man page
print,MRBPObj-method Man page
print,MRPPObj-method Man page
print,MRSPObj-method Man page
print,PTMPObj-method Man page
ptmp Man page Source code
pvalue Man page
pvalue,CoverageObj-method Man page
pvalue,EMRPPObj-method Man page
pvalue,KSGFObj-method Man page
pvalue,LADObj-method Man page
pvalue,MRBPObj-method Man page
pvalue,MRPPObj-method Man page
pvalue,MRSPObj-method Man page
pvalue,PTMPObj-method Man page
pvalue-methods Man page
rao Man page
residuals,LADObj-method Man page
show,CoverageObj-method Man page
show,EMRPPObj-method Man page
show,KSGFObj-method Man page
show,LADObj-method Man page
show,MEDQObj-method Man page
show,MRBPObj-method Man page
show,MRPPObj-method Man page
show,MRSPObj-method Man page
show,PTMPObj-method Man page
sp Man page Source code
summary,CoverageObj-method Man page
summary,EMRPPObj-method Man page
summary,KSGFObj-method Man page
summary,LADObj-method Man page
summary,MEDQObj-method Man page
summary,MRBPObj-method Man page
summary,MRPPObj-method Man page
summary,MRSPObj-method Man page
summary,PTMPObj-method Man page

Files

inst
inst/doc
inst/doc/BlossomVignette.pdf
src
src/InternalFcts.f90
src/myHelp.c
NAMESPACE
data
data/mrbp1.txt.gz
data/brad302.txt.gz
data/paired1.txt.gz
data/lily.txt.gz
data/agree2.txt.gz
data/bgrouse.txt.gz
data/example4.txt.gz
data/blue162.txt.gz
data/acorn.txt.gz
data/habitat.txt.gz
data/paired2.txt.gz
data/prefer.txt.gz
data/ex4rank.txt.gz
data/rao.txt.gz
data/example1.txt.gz
data/lahontan.txt.gz
data/fraserf.txt.gz
data/example3.txt.gz
data/neter365.txt.gz
data/npof.txt.gz
R
R/ptmp.r
R/mrpp.r
R/MedQObjDef.r
R/lad.r
R/EMRPPObjDef.r
R/MRPPObjDef.r
R/KSGFObjDef.r
R/medq.r
R/LADObjDef.r
R/hypothesis.test.r
R/PTMPObjDef.r
R/ols.r
R/MRBPObjDef.r
R/CoverageObjDef.r
R/sp.r
R/mrbp.r
R/coverage.r
R/MRSPObjDef.r
MD5
DESCRIPTION
man
man/mrbp1.Rd
man/ptmp.Rd
man/rao.Rd
man/lad.Rd
man/fraserf.Rd
man/brad302.Rd
man/habitat.Rd
man/PTMPObj-class.Rd
man/example3.Rd
man/coverage.Rd
man/npof.Rd
man/MRBPObj-class.Rd
man/BlossomPkg.Rd
man/paired1.Rd
man/example1.Rd
man/CoverageObj-class.Rd
man/LADObj-class.Rd
man/agree2.Rd
man/neter365.Rd
man/MEDQObj-class.Rd
man/paired2.Rd
man/Dist2mvm.Rd
man/MRPPObj-class.Rd
man/ols.Rd
man/hypothesis.test.Rd
man/lily.Rd
man/bgrouse.Rd
man/mrbp.Rd
man/prefer.Rd
man/QuantValues.Rd
man/MRSPObj-class.Rd
man/sp.Rd
man/medq.Rd
man/ex4rank.Rd
man/KSGFObj-class.Rd
man/acorn.Rd
man/blue162.Rd
man/mrpp.Rd
man/ResampVals.Rd
man/example4.Rd
man/pvalue.Rd
man/lahontan.Rd
man/EMRPPObj-class.Rd
Blossom documentation built on May 19, 2017, 9:28 p.m.