BuyseTest: Generalized Pairwise Comparisons

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Implementation of the Generalized Pairwise Comparisons. This test enables to compare two groups of observations in randomized trials(e.g treated vs. control patients) on several prioritized outcomes. Pairwise comparisons require consideration of all possible pairs of individuals, one taken from the treatment group and the other taken from the control group. The outcomes of the two individuals forming a pair are compared. Thresholds of minimal clinically significant differences can be defined. It is possible to analyse simultaneously several outcomes by prioritizing the variables that capture them. The highest priority is assigned to the variable considered the most clinically relevant. A natural way of handling uninformative or neutral pairs is to consider the outcomes in descending order of priority: whenever a pair is uninformative or neutral for an outcome of higher priority, the outcomes of lower priority are examined In the case of time-to-event endpoint, four methods to handle censored observations are available in this package (Gehan, Peto, Efron, and Peron).

Author
Brice Ozenne[aut, cre], Julien Peron[aut]
Date of publication
2016-08-17 10:40:20
Maintainer
brice ozenne <brice.ozenne@orange.fr>
License
GPL-3
Version
1.0

View on CRAN

Man pages

BuyseRes-class
Class "BuyseRes" (output of BuyseTest)
BuyseRes-getCount
get Method for Class "BuyseRes"
BuyseRes-show
Show Method for Class "BuyseRes"
BuyseRes-summary
Summary Method for Class "BuyseRes"
BuyseTest
Generalized Pairwise Comparisons
BuyseTest_cpp
C++ function performing the pairwise comparison over several...
constStrata
Strata creation
internal-computation
internal functions for BuyseTest - computations
internal-intilisation
internal functions for BuyseTest - intilisation
internal-print
internal functions for BuyseTest - display
simulation
Simulation of data for the BuyseTest
validFCTs
Check argument in functions

Files in this package

BuyseTest
BuyseTest/inst
BuyseTest/inst/Internal_tests
BuyseTest/inst/Internal_tests/tempo.cpp
BuyseTest/inst/Internal_tests/Internal
BuyseTest/inst/Internal_tests/Internal/test_calcOnePair.cpp
BuyseTest/inst/Internal_tests/Internal/test_calcAllPairs.R
BuyseTest/inst/Internal_tests/Internal/test_BuyseTestCPP.R
BuyseTest/inst/Internal_tests/Internal/test_calcAllPairs.cpp
BuyseTest/inst/Internal_tests/Internal/test_calcOnePair.R
BuyseTest/inst/TODO.txt
BuyseTest/inst/man_save
BuyseTest/inst/man_save/BuyseRes-class.Rd
BuyseTest/inst/man_save/BuyseTest_cpp.Rd
BuyseTest/inst/man_save/initFunctions.Rd
BuyseTest/inst/man_save/summary.BuyseRes.Rd
BuyseTest/inst/man_save/calcFunctions.Rd
BuyseTest/inst/man_save/constStrata.Rd
BuyseTest/inst/man_save/BuyseTest.Rd
BuyseTest/inst/save
BuyseTest/inst/save/src
BuyseTest/inst/save/src/Makevars
BuyseTest/inst/save/src/FCT_buyseTest.cpp
BuyseTest/inst/save/src/FCT_calcOnePair.h
BuyseTest/inst/save/src/FCT_calcAllPairs.h
BuyseTest/inst/save/R
BuyseTest/inst/save/R/METHOD_get.R
BuyseTest/inst/save/R/METHOD_summary.R
BuyseTest/inst/save/R/METHOD_print.R
BuyseTest/inst/save/R/BuyseTest-package.R
BuyseTest/inst/save/R/FCT_support.R
BuyseTest/inst/save/R/FCT_Valid.R
BuyseTest/inst/save/R/RcppExports.R
BuyseTest/inst/save/R/FCTi-print.R
BuyseTest/inst/save/R/FCTi-initilization.R
BuyseTest/inst/save/R/FCT_BuyseTest.R
BuyseTest/inst/save/R/OBJECT_BuyseTest.R
BuyseTest/inst/save/R/FCTi-computation.R
BuyseTest/inst/save/R/FCT_simul.R
BuyseTest/inst/save/DESCRIPTION
BuyseTest/inst/BuysePower
BuyseTest/inst/BuysePower/summary.BuyseSample.Rd
BuyseTest/inst/BuysePower/FCT_calcAllPairsPower.h
BuyseTest/inst/BuysePower/FCT_buysePower.R
BuyseTest/inst/BuysePower/BuyseSample-class.Rd
BuyseTest/inst/BuysePower/BuysePower.Rd
BuyseTest/inst/BuysePower/OBJET_buyseSample.R
BuyseTest/tests
BuyseTest/tests/test_parallel.R
BuyseTest/tests/test_valid.R
BuyseTest/tests/FCT
BuyseTest/tests/FCT/FCT_check.R
BuyseTest/tests/test_initSurvival.R
BuyseTest/tests/testBT_noStrata.R
BuyseTest/tests/Results-version1.0
BuyseTest/tests/Results-version1.0/test_initSurvival-results_initSurvival.RData
BuyseTest/tests/Results-version1.0/test_noStrata.RData
BuyseTest/tests/Results-version1.0/test_strata.RData
BuyseTest/tests/Results-version1.0/test_strata-save.RData
BuyseTest/tests/test_Julien.R
BuyseTest/tests/testBT_strata.R
BuyseTest/src
BuyseTest/src/Makevars
BuyseTest/src/FCT_buyseTest.cpp
BuyseTest/src/FCT_calcOnePair.h
BuyseTest/src/FCT_calcAllPairs.h
BuyseTest/src/RcppExports.cpp
BuyseTest/NAMESPACE
BuyseTest/R
BuyseTest/R/METHOD_get.R
BuyseTest/R/examples
BuyseTest/R/examples/EX_BuyseTest.R
BuyseTest/R/METHOD_summary.R
BuyseTest/R/METHOD_print.R
BuyseTest/R/BuyseTest-package.R
BuyseTest/R/FCT_support.R
BuyseTest/R/FCT_Valid.R
BuyseTest/R/RcppExports.R
BuyseTest/R/FCTi-print.R
BuyseTest/R/FCTi-initilization.R
BuyseTest/R/FCT_BuyseTest.R
BuyseTest/R/OBJECT_BuyseTest.R
BuyseTest/R/FCTi-computation.R
BuyseTest/R/FCT_simul.R
BuyseTest/MD5
BuyseTest/DESCRIPTION
BuyseTest/man
BuyseTest/man/simulation.Rd
BuyseTest/man/BuyseRes-class.Rd
BuyseTest/man/internal-print.Rd
BuyseTest/man/BuyseTest_cpp.Rd
BuyseTest/man/internal-intilisation.Rd
BuyseTest/man/BuyseRes-getCount.Rd
BuyseTest/man/constStrata.Rd
BuyseTest/man/validFCTs.Rd
BuyseTest/man/internal-computation.Rd
BuyseTest/man/BuyseTest.Rd
BuyseTest/man/BuyseRes-show.Rd
BuyseTest/man/BuyseRes-summary.Rd