CACIMAR: Cross-Species Analysis of Cell Identities, Markers and Regulations

A toolkit to perform cross-species analysis based on scRNA-seq data. This package contains 5 main features. (1) identify Markers in each cluster. (2) Cell type annotation (3) identify conserved markers. (4) identify conserved cell types. (5) identify conserved modules of regulatory networks.

Getting started

Package details

AuthorJunyao Jiang <jiangjunyao789@163.com>
MaintainerJunyao Jiang <jiangjunyao789@163.com>
LicenseMIT + file LICENSE
Version1.0.0
URL https://github.com/jiang-junyao/CACIMAR
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("CACIMAR")

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CACIMAR documentation built on May 18, 2022, 9:07 a.m.