CASMAP: Detection of Statistically Significant Combinations of SNPs in Association Mapping

A significant pattern mining-based toolbox for region-based genome-wide association studies and higher-order epistasis analyses, implementing the methods described in Llinares-López et al. (2017) <doi:10.1093/bioinformatics/btx071>.

Package details

AuthorFelipe Llinares-López [aut, cph], Laetitia Papaxanthos [aut, cph], Damian Roqueiro [aut, cph], Matthew Baker [ctr], Mikołaj Rybiński [ctr], Uwe Schmitt [ctr], Dean Bodenham [aut, cre, cph], Karsten Borgwardt [aut, fnd, cph]
MaintainerDean Bodenham <deanbodenhambsse@gmail.com>
LicenseGPL (>= 2)
Version0.6.0
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("CASMAP")

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CASMAP documentation built on May 1, 2019, 10:54 p.m.