CLME: Constrained Inference for Linear Mixed Effects Models

Estimation and inference for linear models where some or all of the fixed-effects coefficients are subject to order restrictions. This package uses the robust residual bootstrap methodology for inference, and can handle some structure in the residual variance matrix.

Install the latest version of this package by entering the following in R:
AuthorCasey M. Jelsema, Shyamal D. Peddada
Date of publication2016-11-08 00:25:41
MaintainerCasey M. Jelsema <>

View on CRAN

Man pages

AIC.clme: Akaike information criterion

as.clme: Constructor method for objects S3 class clme

BIC.clme: Bayesian information criterion

clme: Constrained Inference for Linear Mixed Effects Models

clme_em: Constrained EM algorithm for linear fixed or mixed effects...

CLME-package: Constrained inference for linear mixed models.

clme_resids: Computes various types of residuals

confint: Individual confidence intervals

create.constraints: Generate common order constraints

fibroid: Fibroid Growth Study

fixef.clme: Extract fixed effects

formula.clme: Extract formula

logLik.clme: Log-likelihood

lrt.stat: Likelihood ratio type statistic (global)

minque: MINQUE Algorithm

model.frame.clme: Extracts the model frame

model.matrix.clme: Extract the model design matrix.

model_terms_clme: Create model matrices for 'clme'

nobs.clme: Number of observations

plot.clme: S3 method to plot objects of class 'clme'

plot.summary.clme: S3 method to plot objects of class 'clme'

print.clme: Printout of fitted object.

print.summary.clme: S3 method to print a summary for objects of class 'clme'

print.varcorr_clme: Printout for variance components

ranef: Extract random effects

ranef.clme: Extract random effects

rat.blood: Experiment on mice

resid_boot: Obtain Residual Bootstrap

residuals.clme: Various types of residuals

shiny_clme: Shiny GUI for CLME

sigma.clme: Residual variance components

sigma.summary.clme: Residual variance components

summary.clme: Produce summary values for objects of class 'clme'

VarCorr: Variance components

vcov.clme: Variance-covariance matrix

w.stat: Williams' Type Test Statistic.


AIC.clme Man page
AIC.summary.clme Man page
as.clme Man page
BIC.clme Man page
BIC.summary.clme Man page
clme Man page
clme_em Man page
clme_em_fixed Man page
clme_em_mixed Man page
CLME-package Man page
clme_resids Man page
coef.clme Man page
coefficients.clme Man page
coefficients.summary.clme Man page
coef.summary.clme Man page
confint.clme Man page
confint.summary.clme Man page
create.constraints Man page
fibroid Man page
fixed.effects Man page
fixed.effects.clme Man page
fixed.effects.summary.clme Man page
fixef.clme Man page
fixef.summary.clme Man page
formula.clme Man page
is.clme Man page
logLik.clme Man page
logLik.summary.clme Man page
lrt.stat Man page
minque Man page
model.frame.clme Man page
model.frame.summary.clme Man page
model.matrix.clme Man page
model.matrix.summary.clme Man page
model_terms_clme Man page
nobs.clme Man page
nobs.summary.clme Man page
plot.clme Man page
plot.summary.clme Man page
print.clme Man page
print.summary.clme Man page
print.varcorr_clme Man page
random.effects Man page
random.effects.clme Man page
random.effects.summary.clme Man page
ranef.clme Man page
ranef.summary.clme Man page
rat.blood Man page
resid_boot Man page
residuals.clme Man page
residuals.summary.clme Man page
shiny_clme Man page
shinyServer_clme Man page
shinyUI_clme Man page
sigma.clme Man page
sigma.summary.clme Man page
summary.clme Man page
VarCorr Man page
VarCorr.clme Man page
VarCorr.summary.clme Man page
vcov.clme Man page
vcov.summary.clme Man page
w.stat Man page
w.stat.ind Man page

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