SNPTEST: Case-control data with SNPTEST format

Description Usage Format Source

Description

Case-control data for 200 individuals and 500 SNPs using SNPTEST format (e.g. probabilities of AA, AB and BB genotypes

Usage

1

Format

Two objects: cases and controls. Each object is a matrix with 100 rows and 1505 columns. Column 1-5 correspond to annotation. Files 6-1505 correspond to the probabilities of being AA, AB or BB for 500 SNPs

Source

http://www.stats.ox.ac.uk/~marchini/software/gwas/snptest.html


CNVassocData documentation built on May 29, 2017, 9:11 a.m.