Canek: Batch Correction of Single Cell Transcriptome Data

Non-linear/linear hybrid method for batch-effect correction that uses Mutual Nearest Neighbors (MNNs) to identify similar cells between datasets. Reference: Loza M. et al. (NAR Genomics and Bioinformatics, 2020) <doi:10.1093/nargab/lqac022>.

Package details

AuthorMartin Loza [aut, cre] (<https://orcid.org/0000-0002-3342-2643>), Diego Diez [aut] (<https://orcid.org/0000-0002-2325-4893>)
MaintainerMartin Loza <martin.loza.lopez@gmail.com>
LicenseMIT + file LICENSE
Version0.2.4
URL https://martinloza.github.io/Canek/
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("Canek")

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Canek documentation built on Nov. 6, 2023, 1:06 a.m.